RNA–Protein interactions for RNA: ENST00000459904.1

LMNA-209, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-209ENST00000459904 LRRC71Q8N4P6 559 aa17.14■□□□□ 0.33
LMNA-209ENST00000459904 GJA10Q969M2 543 aa17.14■□□□□ 0.33
LMNA-209ENST00000459904 PBXIP1Q96AQ6 731 aa17.14■□□□□ 0.33
LMNA-209ENST00000459904 NEK1Q96PY6 1258 aa17.14■□□□□ 0.33
LMNA-209ENST00000459904 TLR9Q9NR96 1032 aa17.14■□□□□ 0.33
LMNA-209ENST00000459904 RGS18Q9NS28 235 aa17.14■□□□□ 0.33
LMNA-209ENST00000459904 FAM86C1Q9NVL1 165 aa17.14■□□□□ 0.33
LMNA-209ENST00000459904 BARHL2Q9NY43 387 aa17.14■□□□□ 0.33
LMNA-209ENST00000459904 PCDHB12Q9Y5F1 795 aa17.14■□□□□ 0.33
LMNA-209ENST00000459904 VCPP55072 806 aaKnown RBP17.13■□□□□ 0.33
LMNA-209ENST00000459904 DUSP6Q16828 381 aa17.13■□□□□ 0.33
LMNA-209ENST00000459904 RNF169Q8NCN4 708 aa17.13■□□□□ 0.33
LMNA-209ENST00000459904 FEZF2Q8TBJ5 459 aa17.13■□□□□ 0.33
LMNA-209ENST00000459904 MFSD14AQ96MC6 490 aa17.13■□□□□ 0.33
LMNA-209ENST00000459904 RBM28Q9NW13 759 aaKnown RBP17.13■□□□□ 0.33
LMNA-209ENST00000459904 CFAP54Q96N23 3096 aa17.13■□□□□ 0.33
LMNA-209ENST00000459904 IPO5O00410 1097 aaKnown RBP17.12■□□□□ 0.33
LMNA-209ENST00000459904 CSDE1O75534 798 aaKnown RBP17.12■□□□□ 0.33
LMNA-209ENST00000459904 FOSP01100 380 aaPredicted RBP17.12■□□□□ 0.33
LMNA-209ENST00000459904 TECP42680 631 aa17.12■□□□□ 0.33
LMNA-209ENST00000459904 DSC3Q14574 896 aa17.12■□□□□ 0.33
LMNA-209ENST00000459904 ZNF484Q5JVG2 852 aa17.12■□□□□ 0.33
LMNA-209ENST00000459904 KANK3Q6NY19 840 aa17.12■□□□□ 0.33
LMNA-209ENST00000459904 MIS18BP1Q6P0N0 1132 aa17.12■□□□□ 0.33
LMNA-209ENST00000459904 SLC24A5Q71RS6 500 aa17.12■□□□□ 0.33
LMNA-209ENST00000459904 PPP2R3CQ969Q6 453 aa17.12■□□□□ 0.33
LMNA-209ENST00000459904 CASD1Q96PB1 797 aa17.12■□□□□ 0.33
LMNA-209ENST00000459904 ZNF577Q9BSK1 485 aa17.12■□□□□ 0.33
LMNA-209ENST00000459904 GABBR1Q9UBS5 961 aa17.12■□□□□ 0.33
LMNA-209ENST00000459904 PLXNA3P51805 1871 aa17.12■□□□□ 0.33
LMNA-209ENST00000459904 C2orf16Q68DN1 1984 aa17.11■□□□□ 0.33
LMNA-209ENST00000459904 NT5C1B-RDH14C9J2C7 533 aa17.11■□□□□ 0.33
LMNA-209ENST00000459904 FSCN2O14926 492 aa17.11■□□□□ 0.33
LMNA-209ENST00000459904 PDGFBP01127 241 aaPredicted RBP17.11■□□□□ 0.33
LMNA-209ENST00000459904 WEE2P0C1S8 567 aa17.11■□□□□ 0.33
LMNA-209ENST00000459904 CRYBB1P53674 252 aaPredicted RBP17.11■□□□□ 0.33
LMNA-209ENST00000459904 UGCGQ16739 394 aa17.11■□□□□ 0.33
LMNA-209ENST00000459904 LONRF3Q496Y0 759 aa17.11■□□□□ 0.33
LMNA-209ENST00000459904 PPP1R18Q6NYC8 613 aa17.11■□□□□ 0.33
LMNA-209ENST00000459904 DHX32Q7L7V1 743 aaKnown RBP17.11■□□□□ 0.33
LMNA-209ENST00000459904 PHF7Q9BWX1 381 aaPredicted RBP17.11■□□□□ 0.33
LMNA-209ENST00000459904 SMOC2Q9H3U7 446 aa17.11■□□□□ 0.33
LMNA-209ENST00000459904 ATP6V0A4Q9HBG4 840 aa17.11■□□□□ 0.33
LMNA-209ENST00000459904 AKT3Q9Y243 479 aa17.11■□□□□ 0.33
LMNA-209ENST00000459904 COL1A2P08123 1366 aa17.11■□□□□ 0.33
LMNA-209ENST00000459904 TMEM150BA6NC51 233 aa17.1■□□□□ 0.33
LMNA-209ENST00000459904 GPR182O15218 404 aa17.1■□□□□ 0.33
LMNA-209ENST00000459904 EDIL3O43854 480 aa17.1■□□□□ 0.33
LMNA-209ENST00000459904 NLRP11P59045 1033 aaKnown RBP17.1■□□□□ 0.33
LMNA-209ENST00000459904 AP3B2Q13367 1082 aa17.1■□□□□ 0.33
LMNA-209ENST00000459904 CBX2Q14781 532 aaPredicted RBP17.1■□□□□ 0.33
LMNA-209ENST00000459904 PRR16Q569H4 304 aa17.1■□□□□ 0.33
LMNA-209ENST00000459904 EFCAB12Q6NXP0 572 aa17.1■□□□□ 0.33
LMNA-209ENST00000459904 SYCE2Q6PIF2 218 aa17.1■□□□□ 0.33
LMNA-209ENST00000459904 CRYGNQ8WXF5 182 aa17.1■□□□□ 0.33
LMNA-209ENST00000459904 SUSD6Q92537 303 aa17.1■□□□□ 0.33
LMNA-209ENST00000459904 TNPO1Q92973 898 aaKnown RBP17.1■□□□□ 0.33
LMNA-209ENST00000459904 PHKBQ93100 1093 aa17.1■□□□□ 0.33
LMNA-209ENST00000459904 TCF25Q9BQ70 676 aa17.1■□□□□ 0.33
LMNA-209ENST00000459904 SH2D3AQ9BRG2 576 aa17.1■□□□□ 0.33
LMNA-209ENST00000459904 S1PR5Q9H228 398 aa17.1■□□□□ 0.33
LMNA-209ENST00000459904 ENTPD7Q9NQZ7 604 aa17.1■□□□□ 0.33
LMNA-209ENST00000459904 TSHZ2Q9NRE2 1034 aa17.1■□□□□ 0.33
LMNA-209ENST00000459904 C1orf112Q9NSG2 853 aa17.1■□□□□ 0.33
LMNA-209ENST00000459904 CHMP2AO43633 222 aa17.09■□□□□ 0.33
LMNA-209ENST00000459904 ZNF862O60290 1169 aa17.09■□□□□ 0.33
LMNA-209ENST00000459904 RPLP2P05387 115 aaKnown RBP17.09■□□□□ 0.33
LMNA-209ENST00000459904 SLC26A2P50443 739 aa17.09■□□□□ 0.33
LMNA-209ENST00000459904 FAM189BP81408 668 aa17.09■□□□□ 0.33
LMNA-209ENST00000459904 TCF15Q12870 199 aa17.09■□□□□ 0.33
LMNA-209ENST00000459904 PKN1Q16512 942 aa17.09■□□□□ 0.33
LMNA-209ENST00000459904 PFKFB3Q16875 520 aaPredicted RBP17.09■□□□□ 0.33
LMNA-209ENST00000459904 CLLU1OSQ5K130 101 aa17.09■□□□□ 0.33
LMNA-209ENST00000459904 ANKRD54Q6NXT1 300 aa17.09■□□□□ 0.33
LMNA-209ENST00000459904 NIPA1Q7RTP0 329 aa17.09■□□□□ 0.33
LMNA-209ENST00000459904 ADAMTS10Q9H324 1103 aa17.09■□□□□ 0.33
LMNA-209ENST00000459904 TMEM161AQ9NX61 479 aa17.09■□□□□ 0.33
LMNA-209ENST00000459904 MAFBQ9Y5Q3 323 aaPredicted RBP17.09■□□□□ 0.33
LMNA-209ENST00000459904 VPS13AQ96RL7 3174 aa17.09■□□□□ 0.33
LMNA-209ENST00000459904 CYP3A4P08684 503 aa17.08■□□□□ 0.32
LMNA-209ENST00000459904 CA8P35219 290 aa17.08■□□□□ 0.32
LMNA-209ENST00000459904 DRP2Q13474 957 aa17.08■□□□□ 0.32
LMNA-209ENST00000459904 KCNC3Q14003 757 aa17.08■□□□□ 0.32
LMNA-209ENST00000459904 KCNT2Q6UVM3 1135 aa17.08■□□□□ 0.32
LMNA-209ENST00000459904 Q6ZUG5 572 aa17.08■□□□□ 0.32
LMNA-209ENST00000459904 HELQQ8TDG4 1101 aa17.08■□□□□ 0.32
LMNA-209ENST00000459904 AUTS2Q8WXX7 1259 aa17.08■□□□□ 0.32
LMNA-209ENST00000459904 BBXQ8WY36 941 aaPredicted RBP17.08■□□□□ 0.32
LMNA-209ENST00000459904 MRPS27Q92552 414 aaKnown RBP17.08■□□□□ 0.32
LMNA-209ENST00000459904 ASIC4Q96FT7 647 aa17.08■□□□□ 0.32
LMNA-209ENST00000459904 AAASQ9NRG9 546 aa17.08■□□□□ 0.32
LMNA-209ENST00000459904 SAMM50Q9Y512 469 aa17.08■□□□□ 0.32
LMNA-209ENST00000459904 CACNA1HO95180 2353 aa17.08■□□□□ 0.32
LMNA-209ENST00000459904 MYO15AQ9UKN7 3530 aa17.08■□□□□ 0.32
LMNA-209ENST00000459904 ZFHX2Q9C0A1 2572 aaPredicted RBP17.07■□□□□ 0.32
LMNA-209ENST00000459904 LAG3P18627 525 aa17.07■□□□□ 0.32
LMNA-209ENST00000459904 METAP2P50579 478 aaKnown RBP eCLIP17.07■□□□□ 0.32
LMNA-209ENST00000459904 UBE3AQ05086 875 aa17.07■□□□□ 0.32
LMNA-209ENST00000459904 TMC7Q7Z402 723 aa17.07■□□□□ 0.32
LMNA-209ENST00000459904 BMP8AQ7Z5Y6 402 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms