RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 COL19A1Q14993 1142 aa11.27□□□□□ -0.61
HDLBP-228ENST00000459788 TARBP2Q15633 366 aaKnown RBP11.27□□□□□ -0.61
HDLBP-228ENST00000459788 PUS10Q3MIT2 529 aaKnown RBP11.27□□□□□ -0.61
HDLBP-228ENST00000459788 SLC24A5Q71RS6 500 aa11.27□□□□□ -0.61
HDLBP-228ENST00000459788 MIER3Q7Z3K6 550 aa11.27□□□□□ -0.61
HDLBP-228ENST00000459788 RTN4RL1Q86UN2 441 aaPredicted RBP11.27□□□□□ -0.61
HDLBP-228ENST00000459788 SLFN12Q8IYM2 578 aa11.27□□□□□ -0.61
HDLBP-228ENST00000459788 UNC45AQ9H3U1 944 aa11.27□□□□□ -0.61
HDLBP-228ENST00000459788 PRDM6Q9NQX0 595 aa11.27□□□□□ -0.61
HDLBP-228ENST00000459788 ORC3Q9UBD5 711 aaPredicted RBP11.27□□□□□ -0.61
HDLBP-228ENST00000459788 IGKV6-21A0A0C4DH24 114 aa11.26□□□□□ -0.61
HDLBP-228ENST00000459788 CARNS1A5YM72 827 aa11.26□□□□□ -0.61
HDLBP-228ENST00000459788 HOXA2O43364 376 aa11.26□□□□□ -0.61
HDLBP-228ENST00000459788 TDP2O95551 362 aa11.26□□□□□ -0.61
HDLBP-228ENST00000459788 LINC00271P0C7V0 271 aa11.26□□□□□ -0.61
HDLBP-228ENST00000459788 EIF4BP23588 611 aaKnown RBP11.26□□□□□ -0.61
HDLBP-228ENST00000459788 DNM2P50570 870 aa11.26□□□□□ -0.61
HDLBP-228ENST00000459788 PSMC5P62195 406 aa11.26□□□□□ -0.61
HDLBP-228ENST00000459788 FAM189BP81408 668 aa11.26□□□□□ -0.61
HDLBP-228ENST00000459788 TBC1D8BQ0IIM8 1120 aa11.26□□□□□ -0.61
HDLBP-228ENST00000459788 BTG3Q14201 252 aaPredicted RBP11.26□□□□□ -0.61
HDLBP-228ENST00000459788 SKIV2LQ15477 1246 aaKnown RBP11.26□□□□□ -0.61
HDLBP-228ENST00000459788 CSPP1Q1MSJ5 1256 aa11.26□□□□□ -0.61
HDLBP-228ENST00000459788 INF2Q27J81 1249 aa11.26□□□□□ -0.61
HDLBP-228ENST00000459788 EFCAB12Q6NXP0 572 aa11.26□□□□□ -0.61
HDLBP-228ENST00000459788 SPRED2Q7Z698 418 aa11.26□□□□□ -0.61
HDLBP-228ENST00000459788 MICALL1Q8N3F8 863 aa11.26□□□□□ -0.61
HDLBP-228ENST00000459788 METTL13Q8N6R0 699 aa11.26□□□□□ -0.61
HDLBP-228ENST00000459788 ADAMTS19Q8TE59 1207 aa11.26□□□□□ -0.61
HDLBP-228ENST00000459788 LINC01599Q8WXQ3 324 aa11.26□□□□□ -0.61
HDLBP-228ENST00000459788 TMX1Q9H3N1 280 aa11.26□□□□□ -0.61
HDLBP-228ENST00000459788 ST3GAL5Q9UNP4 418 aa11.26□□□□□ -0.61
HDLBP-228ENST00000459788 NOC2LQ9Y3T9 749 aaKnown RBP11.26□□□□□ -0.61
HDLBP-228ENST00000459788 PLXNA4Q9HCM2 1894 aa11.25□□□□□ -0.61
HDLBP-228ENST00000459788 FSD2A1L4K1 749 aa11.25□□□□□ -0.61
HDLBP-228ENST00000459788 DENND3A2RUS2 1198 aa11.25□□□□□ -0.61
HDLBP-228ENST00000459788 C9IYK1 514 aa11.25□□□□□ -0.61
HDLBP-228ENST00000459788 GAS2O43903 313 aaKnown RBP11.25□□□□□ -0.61
HDLBP-228ENST00000459788 PPFIA3O75145 1194 aa11.25□□□□□ -0.61
HDLBP-228ENST00000459788 BAG4O95429 457 aaKnown RBP11.25□□□□□ -0.61
HDLBP-228ENST00000459788 CTDNEP1O95476 244 aa11.25□□□□□ -0.61
HDLBP-228ENST00000459788 CTNNB1P35222 781 aa11.25□□□□□ -0.61
HDLBP-228ENST00000459788 KRT2P35908 639 aa11.25□□□□□ -0.61
HDLBP-228ENST00000459788 QARSP47897 775 aaKnown RBP11.25□□□□□ -0.61
HDLBP-228ENST00000459788 NEK4P51957 841 aa11.25□□□□□ -0.61
HDLBP-228ENST00000459788 UBE3AQ05086 875 aa11.25□□□□□ -0.61
HDLBP-228ENST00000459788 TMEM62Q0P6H9 643 aa11.25□□□□□ -0.61
HDLBP-228ENST00000459788 NFX1Q12986 1120 aaKnown RBP11.25□□□□□ -0.61
HDLBP-228ENST00000459788 DSC3Q14574 896 aa11.25□□□□□ -0.61
HDLBP-228ENST00000459788 ME3Q16798 604 aa11.25□□□□□ -0.61
HDLBP-228ENST00000459788 LETM2Q2VYF4 491 aa11.25□□□□□ -0.61
HDLBP-228ENST00000459788 ZNF410Q86VK4 478 aa11.25□□□□□ -0.61
HDLBP-228ENST00000459788 BANK1Q8NDB2 785 aa11.25□□□□□ -0.61
HDLBP-228ENST00000459788 PPP2R3CQ969Q6 453 aa11.25□□□□□ -0.61
HDLBP-228ENST00000459788 AIFM3Q96NN9 605 aa11.25□□□□□ -0.61
HDLBP-228ENST00000459788 LLPHQ9BRT6 129 aaKnown RBP11.25□□□□□ -0.61
HDLBP-228ENST00000459788 TRAIPQ9BWF2 469 aa11.25□□□□□ -0.61
HDLBP-228ENST00000459788 INO80BQ9C086 356 aaPredicted RBP11.25□□□□□ -0.61
HDLBP-228ENST00000459788 ADAMTS10Q9H324 1103 aa11.25□□□□□ -0.61
HDLBP-228ENST00000459788 NSUN3Q9H649 340 aaKnown RBP11.25□□□□□ -0.61
HDLBP-228ENST00000459788 CHST12Q9NRB3 414 aa11.25□□□□□ -0.61
HDLBP-228ENST00000459788 AAASQ9NRG9 546 aa11.25□□□□□ -0.61
HDLBP-228ENST00000459788 TMEM161AQ9NX61 479 aa11.25□□□□□ -0.61
HDLBP-228ENST00000459788 DAXXQ9UER7 740 aaPredicted RBP11.25□□□□□ -0.61
HDLBP-228ENST00000459788 MTUS1Q9ULD2 1270 aa11.25□□□□□ -0.61
HDLBP-228ENST00000459788 LRFN2Q9ULH4 789 aa11.25□□□□□ -0.61
HDLBP-228ENST00000459788 KCNJ14Q9UNX9 436 aa11.25□□□□□ -0.61
HDLBP-228ENST00000459788 PCDHB7Q9Y5E2 793 aa11.25□□□□□ -0.61
HDLBP-228ENST00000459788 MAFO75444 373 aaPredicted RBP11.24□□□□□ -0.61
HDLBP-228ENST00000459788 STBD1O95210 358 aa11.24□□□□□ -0.61
HDLBP-228ENST00000459788 MMP1P03956 469 aa11.24□□□□□ -0.61
HDLBP-228ENST00000459788 P4HBP07237 508 aaKnown RBP11.24□□□□□ -0.61
HDLBP-228ENST00000459788 FDPSP14324 419 aaKnown RBP11.24□□□□□ -0.61
HDLBP-228ENST00000459788 ZSCAN20P17040 1043 aaPredicted RBP11.24□□□□□ -0.61
HDLBP-228ENST00000459788 GPC3P51654 580 aa11.24□□□□□ -0.61
HDLBP-228ENST00000459788 ORC2Q13416 577 aaPredicted RBP11.24□□□□□ -0.61
HDLBP-228ENST00000459788 TRIM29Q14134 588 aa11.24□□□□□ -0.61
HDLBP-228ENST00000459788 EPHA7Q15375 998 aa11.24□□□□□ -0.61
HDLBP-228ENST00000459788 KIZQ2M2Z5 673 aa11.24□□□□□ -0.61
HDLBP-228ENST00000459788 LEXMQ3ZCV2 418 aa11.24□□□□□ -0.61
HDLBP-228ENST00000459788 KRT40Q6A162 431 aa11.24□□□□□ -0.61
HDLBP-228ENST00000459788 FAM228AQ86W67 206 aa11.24□□□□□ -0.61
HDLBP-228ENST00000459788 NSUN7Q8NE18 718 aaKnown RBP11.24□□□□□ -0.61
HDLBP-228ENST00000459788 NEK9Q8TD19 979 aa11.24□□□□□ -0.61
HDLBP-228ENST00000459788 TMEM40Q8WWA1 233 aa11.24□□□□□ -0.61
HDLBP-228ENST00000459788 TNFRSF25Q93038 417 aa11.24□□□□□ -0.61
HDLBP-228ENST00000459788 ZBTB10Q96DT7 871 aa11.24□□□□□ -0.61
HDLBP-228ENST00000459788 ZSCAN31Q96LW9 406 aaPredicted RBP11.24□□□□□ -0.61
HDLBP-228ENST00000459788 CEP89Q96ST8 783 aa11.24□□□□□ -0.61
HDLBP-228ENST00000459788 UHRF1Q96T88 793 aaPredicted RBP11.24□□□□□ -0.61
HDLBP-228ENST00000459788 ADAM2Q99965 735 aa11.24□□□□□ -0.61
HDLBP-228ENST00000459788 LARP6Q9BRS8 491 aaKnown RBP11.24□□□□□ -0.61
HDLBP-228ENST00000459788 UBE2ZQ9H832 354 aaPredicted RBP11.24□□□□□ -0.61
HDLBP-228ENST00000459788 DACT1Q9NYF0 836 aa11.24□□□□□ -0.61
HDLBP-228ENST00000459788 VAV3Q9UKW4 847 aa11.24□□□□□ -0.61
HDLBP-228ENST00000459788 LIMCH1Q9UPQ0 1083 aa11.24□□□□□ -0.61
HDLBP-228ENST00000459788 AKT3Q9Y243 479 aa11.24□□□□□ -0.61
HDLBP-228ENST00000459788 FAM50BQ9Y247 325 aa11.24□□□□□ -0.61
HDLBP-228ENST00000459788 CHMP2AO43633 222 aa11.23□□□□□ -0.61
HDLBP-228ENST00000459788 SLC37A4O43826 429 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms