RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 C1orf186Q6ZWK4 172 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 INTS8Q75QN2 995 aaKnown RBP9.64□□□□□ -0.87
HDAC3-202ENST00000459727 B4GALNT4Q76KP1 1039 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 OTOP1Q7RTM1 612 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 PEX26Q7Z412 305 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 USP37Q86T82 979 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 SRLQ86TD4 932 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 SLC51AQ86UW1 340 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 MCF2L2Q86YR7 1114 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 RHOT2Q8IXI1 618 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 FAM178BQ8IXR5 827 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 C12orf56Q8IXR9 622 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 RASGEF1CQ8N431 466 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 MYCT1Q8N699 235 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 MORC4Q8TE76 937 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 FAM151AQ8WW52 585 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 CTNNBL1Q8WYA6 563 aaPredicted RBP9.64□□□□□ -0.87
HDAC3-202ENST00000459727 RFFLQ8WZ73 363 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 ZNF622Q969S3 477 aaKnown RBP eCLIP9.64□□□□□ -0.87
HDAC3-202ENST00000459727 HVCN1Q96D96 273 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 CSRNP1Q96S65 589 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.64□□□□□ -0.871e-9■■■□□ 19.1
HDAC3-202ENST00000459727 CAPS2Q9BXY5 557 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 FAM129AQ9BZQ8 928 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 RAB17Q9H0T7 212 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 ISCUQ9H1K1 167 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 RASSF4Q9H2L5 321 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.64□□□□□ -0.87
HDAC3-202ENST00000459727 LARSQ9P2J5 1176 aaKnown RBP9.64□□□□□ -0.87
HDAC3-202ENST00000459727 TCEAL9Q9UHQ7 104 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 TMEM59LQ9UK28 342 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 NENFQ9UMX5 172 aa9.64□□□□□ -0.87
HDAC3-202ENST00000459727 RGPD3A6NKT7 1758 aaPredicted RBP9.63□□□□□ -0.87
HDAC3-202ENST00000459727 RGPD4Q7Z3J3 1758 aa9.63□□□□□ -0.87
HDAC3-202ENST00000459727 NPHP3-ACAD11A0A0J9YXS1 232 aa9.63□□□□□ -0.87
HDAC3-202ENST00000459727 ARHGEF35A5YM69 484 aa9.63□□□□□ -0.87
HDAC3-202ENST00000459727 MIF4GDA9UHW6 222 aaKnown RBP9.63□□□□□ -0.87
HDAC3-202ENST00000459727 AGPSO00116 658 aa9.63□□□□□ -0.87
HDAC3-202ENST00000459727 KCNK3O14649 394 aa9.63□□□□□ -0.87
HDAC3-202ENST00000459727 PMM2O15305 246 aa9.63□□□□□ -0.87
HDAC3-202ENST00000459727 PHACTR2O75167 634 aa9.63□□□□□ -0.87
HDAC3-202ENST00000459727 GGPS1O95749 300 aa9.63□□□□□ -0.87
HDAC3-202ENST00000459727 SCP2P22307 547 aa9.63□□□□□ -0.87
HDAC3-202ENST00000459727 HSPA9P38646 679 aaKnown RBP9.63□□□□□ -0.87
HDAC3-202ENST00000459727 MATR3P43243 847 aaKnown RBP eCLIP9.63□□□□□ -0.87
HDAC3-202ENST00000459727 FMO5P49326 533 aa9.63□□□□□ -0.87
HDAC3-202ENST00000459727 HADHBP55084 474 aaKnown RBP9.63□□□□□ -0.87
HDAC3-202ENST00000459727 BIRC3Q13489 604 aa9.63□□□□□ -0.87
HDAC3-202ENST00000459727 ZNF571Q7Z3V5 609 aaPredicted RBP9.63□□□□□ -0.87
HDAC3-202ENST00000459727 SIAH1Q8IUQ4 282 aa9.63□□□□□ -0.87
HDAC3-202ENST00000459727 EFCAB13Q8IY85 973 aa9.63□□□□□ -0.87
HDAC3-202ENST00000459727 ANKRD13CQ8N6S4 541 aa9.63□□□□□ -0.87
HDAC3-202ENST00000459727 LRRC57Q8N9N7 239 aa9.63□□□□□ -0.87
HDAC3-202ENST00000459727 C3orf20Q8ND61 904 aa9.63□□□□□ -0.87
HDAC3-202ENST00000459727 TPCN2Q8NHX9 752 aa9.63□□□□□ -0.87
HDAC3-202ENST00000459727 BORCS6Q96GS4 357 aa9.63□□□□□ -0.87
HDAC3-202ENST00000459727 FAM81BQ96LP2 452 aa9.63□□□□□ -0.87
HDAC3-202ENST00000459727 RUSC1Q9BVN2 902 aa9.63□□□□□ -0.87
HDAC3-202ENST00000459727 MAF1Q9H063 256 aa9.63□□□□□ -0.87
HDAC3-202ENST00000459727 DBNDD1Q9H9R9 158 aa9.63□□□□□ -0.87
HDAC3-202ENST00000459727 EPB41L5Q9HCM4 733 aa9.63□□□□□ -0.87
HDAC3-202ENST00000459727 FAM114A2Q9NRY5 505 aa9.63□□□□□ -0.87
HDAC3-202ENST00000459727 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.63□□□□□ -0.87
HDAC3-202ENST00000459727 DMGDHQ9UI17 866 aaKnown RBP9.63□□□□□ -0.87
HDAC3-202ENST00000459727 DBR1Q9UK59 544 aaKnown RBP9.63□□□□□ -0.87
HDAC3-202ENST00000459727 AMFRQ9UKV5 643 aa9.63□□□□□ -0.87
HDAC3-202ENST00000459727 RRP15Q9Y3B9 282 aaKnown RBP9.63□□□□□ -0.87
HDAC3-202ENST00000459727 F8VZ95 297 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 MEIS1O00470 390 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 EBAG9O00559 213 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 EIF3HO15372 352 aaKnown RBP eCLIP9.62□□□□□ -0.87
HDAC3-202ENST00000459727 NCK2O43639 380 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 DKC1O60832 514 aaKnown RBP eCLIP9.62□□□□□ -0.87
HDAC3-202ENST00000459727 LYPLA2O95372 231 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 FTCDO95954 541 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 FDX1P10109 184 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 MYBL2P10244 700 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 SLC9A1P19634 815 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 CXCR5P32302 372 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 CASP5P51878 434 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 EIF3BP55884 814 aaKnown RBP9.62□□□□□ -0.87
HDAC3-202ENST00000459727 MYL7Q01449 175 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 GHRHRQ02643 423 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 GUCY2DQ02846 1103 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 ARID5AQ03989 594 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 SMYD5Q6GMV2 418 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 KDM7AQ6ZMT4 941 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 SH3BP5LQ7L8J4 393 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 ZNF720Q7Z2F6 126 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 ARMC9Q7Z3E5 817 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 FAM83AQ86UY5 434 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 COL23A1Q86Y22 540 aaPredicted RBP9.62□□□□□ -0.87
HDAC3-202ENST00000459727 TPH2Q8IWU9 490 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 OGFOD1Q8N543 542 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 SCFD2Q8WU76 684 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 PPM1EQ8WY54 764 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 KRT12Q99456 494 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 ZNF577Q9BSK1 485 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 FGFBP2Q9BYJ0 223 aa9.62□□□□□ -0.87
HDAC3-202ENST00000459727 CARD9Q9H257 536 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms