RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 PLATP00750 562 aa4.27□□□□□ -1.73
SCARNA18-201ENST00000459004 HMGCRP04035 888 aa4.27□□□□□ -1.73
SCARNA18-201ENST00000459004 BPIP17213 487 aa4.27□□□□□ -1.73
SCARNA18-201ENST00000459004 RGS3P49796 1198 aa4.27□□□□□ -1.73
SCARNA18-201ENST00000459004 KCNQ1P51787 676 aa4.27□□□□□ -1.73
SCARNA18-201ENST00000459004 BCAR1P56945 870 aa4.27□□□□□ -1.73
SCARNA18-201ENST00000459004 PHC1P78364 1004 aa4.27□□□□□ -1.73
SCARNA18-201ENST00000459004 MAP3K12Q12852 859 aa4.27□□□□□ -1.73
SCARNA18-201ENST00000459004 ZMAT1Q5H9K5 638 aa4.27□□□□□ -1.73
SCARNA18-201ENST00000459004 PRAMEF9Q5VWM5 478 aa4.27□□□□□ -1.73
SCARNA18-201ENST00000459004 SLFN12LQ6IEE8 588 aa4.27□□□□□ -1.73
SCARNA18-201ENST00000459004 UBR7Q8N806 425 aa4.27□□□□□ -1.73
SCARNA18-201ENST00000459004 C7orf31Q8N865 590 aa4.27□□□□□ -1.73
SCARNA18-201ENST00000459004 ZNF610Q8N9Z0 462 aa4.27□□□□□ -1.73
SCARNA18-201ENST00000459004 RTF1Q92541 710 aaKnown RBP4.27□□□□□ -1.73
SCARNA18-201ENST00000459004 RPGRQ92834 1020 aaKnown RBP4.27□□□□□ -1.73
SCARNA18-201ENST00000459004 IFT22Q9H7X7 185 aa4.27□□□□□ -1.73
SCARNA18-201ENST00000459004 ZMAT4Q9H898 229 aa4.27□□□□□ -1.73
SCARNA18-201ENST00000459004 SPTLC3Q9NUV7 552 aa4.27□□□□□ -1.73
SCARNA18-201ENST00000459004 USP36Q9P275 1121 aaKnown RBP4.27□□□□□ -1.73
SCARNA18-201ENST00000459004 CDC42EP3Q9UKI2 254 aa4.27□□□□□ -1.73
SCARNA18-201ENST00000459004 SLC4A7Q9Y6M7 1214 aa4.27□□□□□ -1.73
SCARNA18-201ENST00000459004 ZNF536O15090 1300 aa4.26□□□□□ -1.73
SCARNA18-201ENST00000459004 MAFGO15525 162 aa4.26□□□□□ -1.73
SCARNA18-201ENST00000459004 LAMTOR5O43504 91 aa4.26□□□□□ -1.73
SCARNA18-201ENST00000459004 FOXD2O60548 495 aaPredicted RBP4.26□□□□□ -1.73
SCARNA18-201ENST00000459004 PRPF6O94906 941 aaKnown RBP4.26□□□□□ -1.73
SCARNA18-201ENST00000459004 VIL1P09327 827 aaKnown RBP4.26□□□□□ -1.73
SCARNA18-201ENST00000459004 ZNF888P0CJ79 500 aaPredicted RBP4.26□□□□□ -1.73
SCARNA18-201ENST00000459004 EPHB4P54760 987 aa4.26□□□□□ -1.73
SCARNA18-201ENST00000459004 ADCY2Q08462 1091 aa4.26□□□□□ -1.73
SCARNA18-201ENST00000459004 ZNF827Q17R98 1081 aa4.26□□□□□ -1.73
SCARNA18-201ENST00000459004 TBC1D10BQ4KMP7 808 aaPredicted RBP4.26□□□□□ -1.73
SCARNA18-201ENST00000459004 CT47A1Q5JQC4 288 aaPredicted RBP4.26□□□□□ -1.73
SCARNA18-201ENST00000459004 TRIM68Q6AZZ1 485 aa4.26□□□□□ -1.73
SCARNA18-201ENST00000459004 KANSL1Q7Z3B3 1105 aa4.26□□□□□ -1.73
SCARNA18-201ENST00000459004 GPR155Q7Z3F1 870 aa4.26□□□□□ -1.73
SCARNA18-201ENST00000459004 TTC1Q99614 292 aa4.26□□□□□ -1.73
SCARNA18-201ENST00000459004 EMC7Q9NPA0 242 aa4.26□□□□□ -1.73
SCARNA18-201ENST00000459004 JADE2Q9NQC1 790 aa4.26□□□□□ -1.73
SCARNA18-201ENST00000459004 SAE1Q9UBE0 346 aaPredicted RBP4.26□□□□□ -1.73
SCARNA18-201ENST00000459004 BRINP1O60477 761 aa4.25□□□□□ -1.73
SCARNA18-201ENST00000459004 RAB11FIP3O75154 756 aa4.25□□□□□ -1.73
SCARNA18-201ENST00000459004 ULK1O75385 1050 aa4.25□□□□□ -1.73
SCARNA18-201ENST00000459004 APOL3O95236 402 aa4.25□□□□□ -1.73
SCARNA18-201ENST00000459004 CPEP16870 476 aa4.25□□□□□ -1.73
SCARNA18-201ENST00000459004 SYN1P17600 705 aa4.25□□□□□ -1.73
SCARNA18-201ENST00000459004 MEOX1P50221 254 aa4.25□□□□□ -1.73
SCARNA18-201ENST00000459004 RRADP55042 308 aa4.25□□□□□ -1.73
SCARNA18-201ENST00000459004 PLP2Q04941 152 aa4.25□□□□□ -1.73
SCARNA18-201ENST00000459004 STRN3Q13033 797 aa4.25□□□□□ -1.73
SCARNA18-201ENST00000459004 MYBPC3Q14896 1274 aa4.25□□□□□ -1.73
SCARNA18-201ENST00000459004 NOLC1Q14978 699 aaKnown RBP eCLIP4.25□□□□□ -1.73
SCARNA18-201ENST00000459004 PCOLCEQ15113 449 aa4.25□□□□□ -1.73
SCARNA18-201ENST00000459004 TERF2Q15554 542 aa4.25□□□□□ -1.73
SCARNA18-201ENST00000459004 DGKDQ16760 1214 aa4.25□□□□□ -1.73
SCARNA18-201ENST00000459004 ZNF568Q3ZCX4 644 aa4.25□□□□□ -1.73
SCARNA18-201ENST00000459004 ATP13A4Q4VNC1 1196 aa4.25□□□□□ -1.73
SCARNA18-201ENST00000459004 ESPNLQ6ZVH7 1005 aa4.25□□□□□ -1.73
SCARNA18-201ENST00000459004 USP30Q70CQ3 517 aa4.25□□□□□ -1.73
SCARNA18-201ENST00000459004 LARP4Q71RC2 724 aaKnown RBP eCLIP4.25□□□□□ -1.73
SCARNA18-201ENST00000459004 BMP8AQ7Z5Y6 402 aa4.25□□□□□ -1.73
SCARNA18-201ENST00000459004 STRA8Q7Z7C7 330 aa4.25□□□□□ -1.73
SCARNA18-201ENST00000459004 RTKN2Q8IZC4 609 aa4.25□□□□□ -1.73
SCARNA18-201ENST00000459004 BDH2Q9BUT1 245 aa4.25□□□□□ -1.73
SCARNA18-201ENST00000459004 SEC61A2Q9H9S3 476 aa4.25□□□□□ -1.73
SCARNA18-201ENST00000459004 KCMF1Q9P0J7 381 aa4.25□□□□□ -1.73
SCARNA18-201ENST00000459004 MSRAQ9UJ68 235 aa4.25□□□□□ -1.73
SCARNA18-201ENST00000459004 CNOT11Q9UKZ1 510 aaKnown RBP4.25□□□□□ -1.73
SCARNA18-201ENST00000459004 PTPN22Q9Y2R2 807 aa4.25□□□□□ -1.73
SCARNA18-201ENST00000459004 VWA7Q9Y334 891 aa4.25□□□□□ -1.73
SCARNA18-201ENST00000459004 SBNO2Q9Y2G9 1366 aa4.25□□□□□ -1.73
SCARNA18-201ENST00000459004 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.24□□□□□ -1.73
SCARNA18-201ENST00000459004 NPEPPSL1A6NEC2 478 aa4.24□□□□□ -1.73
SCARNA18-201ENST00000459004 NEMP1O14524 444 aa4.24□□□□□ -1.73
SCARNA18-201ENST00000459004 CNOT4O95628 575 aaKnown RBP4.24□□□□□ -1.73
SCARNA18-201ENST00000459004 ITGB3P05106 788 aa4.24□□□□□ -1.73
SCARNA18-201ENST00000459004 CELA3BP08861 270 aa4.24□□□□□ -1.73
SCARNA18-201ENST00000459004 CNGA1P29973 690 aa4.24□□□□□ -1.73
SCARNA18-201ENST00000459004 STAT5BP51692 787 aa4.24□□□□□ -1.73
SCARNA18-201ENST00000459004 SESN2P58004 480 aaPredicted RBP4.24□□□□□ -1.73
SCARNA18-201ENST00000459004 DDB1Q16531 1140 aa4.24□□□□□ -1.73
SCARNA18-201ENST00000459004 RNF187Q5TA31 235 aaPredicted RBP4.24□□□□□ -1.73
SCARNA18-201ENST00000459004 BROXQ5VW32 411 aa4.24□□□□□ -1.73
SCARNA18-201ENST00000459004 SLFN13Q68D06 897 aa4.24□□□□□ -1.73
SCARNA18-201ENST00000459004 KIAA1841Q6NSI8 718 aa4.24□□□□□ -1.73
SCARNA18-201ENST00000459004 GLB1LQ6UWU2 654 aa4.24□□□□□ -1.73
SCARNA18-201ENST00000459004 FRMD7Q6ZUT3 714 aa4.24□□□□□ -1.73
SCARNA18-201ENST00000459004 FILIP1Q7Z7B0 1213 aa4.24□□□□□ -1.73
SCARNA18-201ENST00000459004 RASSF3Q86WH2 238 aa4.24□□□□□ -1.73
SCARNA18-201ENST00000459004 BCL6BQ8N143 479 aaPredicted RBP4.24□□□□□ -1.73
SCARNA18-201ENST00000459004 AFAP1L2Q8N4X5 818 aa4.24□□□□□ -1.73
SCARNA18-201ENST00000459004 SLC5A5Q92911 643 aa4.24□□□□□ -1.73
SCARNA18-201ENST00000459004 ZNF496Q96IT1 587 aaPredicted RBP4.24□□□□□ -1.73
SCARNA18-201ENST00000459004 RBM15Q96T37 977 aaKnown RBP eCLIP4.24□□□□□ -1.73
SCARNA18-201ENST00000459004 MYL10Q9BUA6 226 aa4.24□□□□□ -1.73
SCARNA18-201ENST00000459004 OR10A2Q9H208 303 aa4.24□□□□□ -1.73
SCARNA18-201ENST00000459004 POFUT1Q9H488 388 aa4.24□□□□□ -1.73
SCARNA18-201ENST00000459004 SPC25Q9HBM1 224 aa4.24□□□□□ -1.73
SCARNA18-201ENST00000459004 PPP4R1LQ9P1A2 415 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms