RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 KCTD17Q8N5Z5 321 aa15.77■□□□□ 0.12
SMPD4-215ENST00000457039 KCNG4Q8TDN1 519 aa15.77■□□□□ 0.12
SMPD4-215ENST00000457039 EPSTI1Q96J88 318 aa15.77■□□□□ 0.12
SMPD4-215ENST00000457039 LBHD1Q9BQE6 289 aaPredicted RBP15.77■□□□□ 0.12
SMPD4-215ENST00000457039 PRO3102Q9H379 93 aa15.77■□□□□ 0.12
SMPD4-215ENST00000457039 RSPH10B2B2RC85 870 aa15.76■□□□□ 0.11
SMPD4-215ENST00000457039 NBNO60934 754 aa15.76■□□□□ 0.11
SMPD4-215ENST00000457039 CHRNA1P02708 482 aa15.76■□□□□ 0.11
SMPD4-215ENST00000457039 RSPH10BP0C881 870 aa15.76■□□□□ 0.11
SMPD4-215ENST00000457039 CSF2RAP15509 400 aa15.76■□□□□ 0.11
SMPD4-215ENST00000457039 RFC2P35250 354 aa15.76■□□□□ 0.11
SMPD4-215ENST00000457039 UBA7P41226 1012 aa15.76■□□□□ 0.11
SMPD4-215ENST00000457039 EPHB4P54760 987 aa15.76■□□□□ 0.11
SMPD4-215ENST00000457039 FPGSQ05932 587 aa15.76■□□□□ 0.11
SMPD4-215ENST00000457039 DRP2Q13474 957 aa15.76■□□□□ 0.11
SMPD4-215ENST00000457039 SPECC1Q5M775 1068 aa15.76■□□□□ 0.11
SMPD4-215ENST00000457039 RSPH3Q86UC2 560 aa15.76■□□□□ 0.11
SMPD4-215ENST00000457039 METTL13Q8N6R0 699 aa15.76■□□□□ 0.11
SMPD4-215ENST00000457039 LRRC15Q8TF66 581 aa15.76■□□□□ 0.11
SMPD4-215ENST00000457039 SYMPKQ92797 1274 aaKnown RBP15.76■□□□□ 0.11
SMPD4-215ENST00000457039 JPH2Q9BR39 696 aaPredicted RBP15.76■□□□□ 0.11
SMPD4-215ENST00000457039 NT5C3AQ9H0P0 336 aa15.76■□□□□ 0.11
SMPD4-215ENST00000457039 SUGCTQ9HAC7 445 aa15.76■□□□□ 0.11
SMPD4-215ENST00000457039 XPNPEP1Q9NQW7 623 aa15.76■□□□□ 0.11
SMPD4-215ENST00000457039 SIP14410 1827 aa15.75■□□□□ 0.11
SMPD4-215ENST00000457039 E9PMD0 336 aa15.75■□□□□ 0.11
SMPD4-215ENST00000457039 CUTAO60888 179 aa15.75■□□□□ 0.11
SMPD4-215ENST00000457039 DGAT1O75907 488 aa15.75■□□□□ 0.11
SMPD4-215ENST00000457039 PARNO95453 639 aaKnown RBP15.75■□□□□ 0.11
SMPD4-215ENST00000457039 EYA4O95677 639 aa15.75■□□□□ 0.11
SMPD4-215ENST00000457039 CXCL10P02778 98 aa15.75■□□□□ 0.11
SMPD4-215ENST00000457039 CTSHP09668 335 aa15.75■□□□□ 0.11
SMPD4-215ENST00000457039 TMOD1P28289 359 aa15.75■□□□□ 0.11
SMPD4-215ENST00000457039 BMP8BP34820 402 aa15.75■□□□□ 0.11
SMPD4-215ENST00000457039 POLGP54098 1239 aaPredicted RBP15.75■□□□□ 0.11
SMPD4-215ENST00000457039 MRPS6P82932 125 aaKnown RBP15.75■□□□□ 0.11
SMPD4-215ENST00000457039 PPIGQ13427 754 aaKnown RBP eCLIP15.75■□□□□ 0.119e-8■■■□□ 17.2
SMPD4-215ENST00000457039 EMC2Q15006 297 aa15.75■□□□□ 0.11
SMPD4-215ENST00000457039 KARSQ15046 597 aaKnown RBP15.75■□□□□ 0.11
SMPD4-215ENST00000457039 C16orf59Q7L2K0 433 aa15.75■□□□□ 0.11
SMPD4-215ENST00000457039 EXOC8Q8IYI6 725 aa15.75■□□□□ 0.11
SMPD4-215ENST00000457039 LEO1Q8WVC0 666 aaPredicted RBP15.75■□□□□ 0.11
SMPD4-215ENST00000457039 SLC7A3Q8WY07 619 aa15.75■□□□□ 0.11
SMPD4-215ENST00000457039 IPO9Q96P70 1041 aaKnown RBP15.75■□□□□ 0.11
SMPD4-215ENST00000457039 OSBPL7Q9BZF2 842 aa15.75■□□□□ 0.11
SMPD4-215ENST00000457039 IL23AQ9NPF7 189 aa15.75■□□□□ 0.11
SMPD4-215ENST00000457039 PCDHA7Q9UN72 937 aa15.75■□□□□ 0.11
SMPD4-215ENST00000457039 DNM3Q9UQ16 869 aa15.75■□□□□ 0.11
SMPD4-215ENST00000457039 CDY2AQ9Y6F7 541 aa15.75■□□□□ 0.11
SMPD4-215ENST00000457039 EVPLQ92817 2033 aa15.75■□□□□ 0.11
SMPD4-215ENST00000457039 RANBP2P49792 3224 aaKnown RBP15.75■□□□□ 0.11
SMPD4-215ENST00000457039 SCN5AQ14524 2016 aa15.74■□□□□ 0.11
SMPD4-215ENST00000457039 RBAK-RBAKDNI3L0D1 243 aa15.74■□□□□ 0.11
SMPD4-215ENST00000457039 GAS2O43903 313 aaKnown RBP15.74■□□□□ 0.11
SMPD4-215ENST00000457039 GPR32O75388 356 aa15.74■□□□□ 0.11
SMPD4-215ENST00000457039 TMEM62Q0P6H9 643 aa15.74■□□□□ 0.11
SMPD4-215ENST00000457039 ZRSR1Q15695 479 aaKnown RBP15.74■□□□□ 0.11
SMPD4-215ENST00000457039 IER5Q5VY09 327 aa15.74■□□□□ 0.11
SMPD4-215ENST00000457039 SHC4Q6S5L8 630 aa15.74■□□□□ 0.11
SMPD4-215ENST00000457039 PADI6Q6TGC4 694 aa15.74■□□□□ 0.11
SMPD4-215ENST00000457039 CALML4Q96GE6 196 aa15.74■□□□□ 0.11
SMPD4-215ENST00000457039 PLIN2Q99541 437 aa15.74■□□□□ 0.11
SMPD4-215ENST00000457039 MTRQ99707 1265 aa15.74■□□□□ 0.11
SMPD4-215ENST00000457039 CELF4Q9BZC1 486 aaKnown RBP15.74■□□□□ 0.11
SMPD4-215ENST00000457039 SCAND2PQ9GZW5 306 aaPredicted RBP15.74■□□□□ 0.11
SMPD4-215ENST00000457039 BHMT2Q9H2M3 363 aa15.74■□□□□ 0.11
SMPD4-215ENST00000457039 ATP6V0A4Q9HBG4 840 aa15.74■□□□□ 0.11
SMPD4-215ENST00000457039 BLOC1S4Q9NUP1 217 aa15.74■□□□□ 0.11
SMPD4-215ENST00000457039 CHMP5Q9NZZ3 219 aa15.74■□□□□ 0.11
SMPD4-215ENST00000457039 TRPV2Q9Y5S1 764 aa15.74■□□□□ 0.11
SMPD4-215ENST00000457039 ARHGEF35A5YM69 484 aa15.73■□□□□ 0.11
SMPD4-215ENST00000457039 USO1O60763 962 aaKnown RBP15.73■□□□□ 0.11
SMPD4-215ENST00000457039 VTNP04004 478 aa15.73■□□□□ 0.11
SMPD4-215ENST00000457039 PFKMP08237 780 aa15.73■□□□□ 0.11
SMPD4-215ENST00000457039 CYP11B2P19099 503 aa15.73■□□□□ 0.11
SMPD4-215ENST00000457039 PLCG1P19174 1290 aa15.73■□□□□ 0.11
SMPD4-215ENST00000457039 NCLP19338 710 aaKnown RBP15.73■□□□□ 0.11
SMPD4-215ENST00000457039 FBXO47Q5MNV8 452 aa15.73■□□□□ 0.11
SMPD4-215ENST00000457039 ZNF710Q8N1W2 664 aa15.73■□□□□ 0.11
SMPD4-215ENST00000457039 TMEM143Q96AN5 459 aa15.73■□□□□ 0.11
SMPD4-215ENST00000457039 CDK5RAP3Q96JB5 506 aa15.73■□□□□ 0.11
SMPD4-215ENST00000457039 SPATA32Q96LK8 384 aa15.73■□□□□ 0.11
SMPD4-215ENST00000457039 CCDC43Q96MW1 224 aaKnown RBP15.73■□□□□ 0.11
SMPD4-215ENST00000457039 MAP7D2Q96T17 732 aa15.73■□□□□ 0.11
SMPD4-215ENST00000457039 ADAMTS10Q9H324 1103 aa15.73■□□□□ 0.11
SMPD4-215ENST00000457039 CDHR5Q9HBB8 845 aa15.73■□□□□ 0.11
SMPD4-215ENST00000457039 BMP2KQ9NSY1 1161 aaPredicted RBP15.73■□□□□ 0.11
SMPD4-215ENST00000457039 SUCLA2Q9P2R7 463 aaPredicted RBP15.73■□□□□ 0.11
SMPD4-215ENST00000457039 AKT3Q9Y243 479 aa15.73■□□□□ 0.11
SMPD4-215ENST00000457039 SQORQ9Y6N5 450 aa15.73■□□□□ 0.11
SMPD4-215ENST00000457039 A0A087X0B3 334 aa15.72■□□□□ 0.11
SMPD4-215ENST00000457039 ACRP10323 421 aa15.72■□□□□ 0.11
SMPD4-215ENST00000457039 ARL2P36404 184 aa15.72■□□□□ 0.11
SMPD4-215ENST00000457039 ME1P48163 572 aa15.72■□□□□ 0.11
SMPD4-215ENST00000457039 DNM2P50570 870 aa15.72■□□□□ 0.11
SMPD4-215ENST00000457039 GPC3P51654 580 aa15.72■□□□□ 0.11
SMPD4-215ENST00000457039 SLC12A3P55017 1021 aa15.72■□□□□ 0.11
SMPD4-215ENST00000457039 NLRP11P59045 1033 aaKnown RBP15.72■□□□□ 0.11
SMPD4-215ENST00000457039 NAALADL2Q58DX5 795 aa15.72■□□□□ 0.11
SMPD4-215ENST00000457039 TMEM240Q5SV17 173 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms