RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 YWHABP31946 246 aaKnown RBP11.25□□□□□ -0.61
ATG4A-206ENST00000457035 CCL23P55773 120 aa11.25□□□□□ -0.61
ATG4A-206ENST00000457035 NPEPPSP55786 919 aa11.25□□□□□ -0.61
ATG4A-206ENST00000457035 CEBPZQ03701 1054 aaKnown RBP11.25□□□□□ -0.61
ATG4A-206ENST00000457035 GRIN1Q05586 938 aa11.25□□□□□ -0.61
ATG4A-206ENST00000457035 ZNF618Q5T7W0 954 aa11.25□□□□□ -0.61
ATG4A-206ENST00000457035 TAF2Q6P1X5 1199 aa11.25□□□□□ -0.61
ATG4A-206ENST00000457035 C16orf59Q7L2K0 433 aa11.25□□□□□ -0.61
ATG4A-206ENST00000457035 KIAA0319LQ8IZA0 1049 aa11.25□□□□□ -0.61
ATG4A-206ENST00000457035 LINC01465Q8N7H1 131 aa11.25□□□□□ -0.61
ATG4A-206ENST00000457035 RETREG2Q8NC44 543 aa11.25□□□□□ -0.61
ATG4A-206ENST00000457035 LINC00301Q8NCQ3 95 aa11.25□□□□□ -0.61
ATG4A-206ENST00000457035 ERMNQ8TAM6 284 aa11.25□□□□□ -0.61
ATG4A-206ENST00000457035 DNAJB3Q8WWF6 145 aa11.25□□□□□ -0.61
ATG4A-206ENST00000457035 ZNF396Q96N95 335 aaPredicted RBP11.25□□□□□ -0.61
ATG4A-206ENST00000457035 SH2D3AQ9BRG2 576 aa11.25□□□□□ -0.61
ATG4A-206ENST00000457035 RAB34Q9BZG1 259 aa11.25□□□□□ -0.61
ATG4A-206ENST00000457035 LAMA2P24043 3122 aaKnown RBP11.24□□□□□ -0.61
ATG4A-206ENST00000457035 SIP14410 1827 aa11.24□□□□□ -0.61
ATG4A-206ENST00000457035 TANC1Q9C0D5 1861 aa11.24□□□□□ -0.61
ATG4A-206ENST00000457035 COL6A3P12111 3177 aa11.24□□□□□ -0.61
ATG4A-206ENST00000457035 IGKV6-21A0A0C4DH24 114 aa11.24□□□□□ -0.61
ATG4A-206ENST00000457035 DLL1O00548 723 aa11.24□□□□□ -0.61
ATG4A-206ENST00000457035 CAND2O75155 1236 aa11.24□□□□□ -0.61
ATG4A-206ENST00000457035 PPP1R37O75864 691 aa11.24□□□□□ -0.61
ATG4A-206ENST00000457035 CHRNA1P02708 482 aa11.24□□□□□ -0.61
ATG4A-206ENST00000457035 CSF2RAP15509 400 aa11.24□□□□□ -0.61
ATG4A-206ENST00000457035 SELPP16109 830 aa11.24□□□□□ -0.61
ATG4A-206ENST00000457035 MUTP22033 750 aa11.24□□□□□ -0.61
ATG4A-206ENST00000457035 MARCKSP29966 332 aaPredicted RBP11.24□□□□□ -0.61
ATG4A-206ENST00000457035 THPOP40225 353 aa11.24□□□□□ -0.61
ATG4A-206ENST00000457035 EPHB4P54760 987 aa11.24□□□□□ -0.61
ATG4A-206ENST00000457035 LRIT3Q3SXY7 679 aa11.24□□□□□ -0.61
ATG4A-206ENST00000457035 FOXD4L6Q3SYB3 417 aaPredicted RBP11.24□□□□□ -0.61
ATG4A-206ENST00000457035 MTERF2Q49AM1 385 aa11.24□□□□□ -0.61
ATG4A-206ENST00000457035 FAM26DQ5JW98 314 aa11.24□□□□□ -0.61
ATG4A-206ENST00000457035 PLA2G4FQ68DD2 849 aa11.24□□□□□ -0.61
ATG4A-206ENST00000457035 ATL3Q6DD88 541 aa11.24□□□□□ -0.61
ATG4A-206ENST00000457035 FOXD4L3Q6VB84 417 aaPredicted RBP11.24□□□□□ -0.61
ATG4A-206ENST00000457035 OTUD6AQ7L8S5 288 aa11.24□□□□□ -0.61
ATG4A-206ENST00000457035 NME8Q8N427 588 aa11.24□□□□□ -0.61
ATG4A-206ENST00000457035 TMEM199Q8N511 208 aa11.24□□□□□ -0.61
ATG4A-206ENST00000457035 CCDC155Q8N6L0 562 aa11.24□□□□□ -0.61
ATG4A-206ENST00000457035 PIGOQ8TEQ8 1089 aa11.24□□□□□ -0.61
ATG4A-206ENST00000457035 SCLYQ96I15 445 aa11.24□□□□□ -0.61
ATG4A-206ENST00000457035 NACC1Q96RE7 527 aa11.24□□□□□ -0.61
ATG4A-206ENST00000457035 LBHD1Q9BQE6 289 aaPredicted RBP11.24□□□□□ -0.61
ATG4A-206ENST00000457035 CYP26B1Q9NR63 512 aa11.24□□□□□ -0.61
ATG4A-206ENST00000457035 TSHZ2Q9NRE2 1034 aa11.24□□□□□ -0.61
ATG4A-206ENST00000457035 ANKEF1Q9NU02 776 aa11.24□□□□□ -0.61
ATG4A-206ENST00000457035 DAXXQ9UER7 740 aaPredicted RBP11.24□□□□□ -0.61
ATG4A-206ENST00000457035 SEPT9Q9UHD8 586 aaPredicted RBP11.24□□□□□ -0.61
ATG4A-206ENST00000457035 FBXO2Q9UK22 296 aaPredicted RBP11.24□□□□□ -0.61
ATG4A-206ENST00000457035 RBM19Q9Y4C8 960 aaKnown RBP11.24□□□□□ -0.61
ATG4A-206ENST00000457035 SRPRBQ9Y5M8 271 aaKnown RBP11.24□□□□□ -0.61
ATG4A-206ENST00000457035 LAMA3Q16787 3333 aa11.24□□□□□ -0.61
ATG4A-206ENST00000457035 MYH11P35749 1972 aa11.23□□□□□ -0.61
ATG4A-206ENST00000457035 RSPH10B2B2RC85 870 aa11.23□□□□□ -0.61
ATG4A-206ENST00000457035 RBAK-RBAKDNI3L0D1 243 aa11.23□□□□□ -0.61
ATG4A-206ENST00000457035 MAFO75444 373 aaPredicted RBP11.23□□□□□ -0.61
ATG4A-206ENST00000457035 RSPH10BP0C881 870 aa11.23□□□□□ -0.61
ATG4A-206ENST00000457035 LONP1P36776 959 aaKnown RBP11.23□□□□□ -0.61
ATG4A-206ENST00000457035 ANP32AP39687 249 aaKnown RBP11.23□□□□□ -0.61
ATG4A-206ENST00000457035 CCT6AP40227 531 aaKnown RBP11.23□□□□□ -0.61
ATG4A-206ENST00000457035 DNM1Q05193 864 aaKnown RBP11.23□□□□□ -0.61
ATG4A-206ENST00000457035 FPGSQ05932 587 aa11.23□□□□□ -0.61
ATG4A-206ENST00000457035 TBC1D8BQ0IIM8 1120 aa11.23□□□□□ -0.61
ATG4A-206ENST00000457035 MBTPS1Q14703 1052 aa11.23□□□□□ -0.61
ATG4A-206ENST00000457035 XKR9Q5GH70 373 aa11.23□□□□□ -0.61
ATG4A-206ENST00000457035 HYIQ5T013 277 aa11.23□□□□□ -0.61
ATG4A-206ENST00000457035 KRT79Q5XKE5 535 aa11.23□□□□□ -0.61
ATG4A-206ENST00000457035 HAUS3Q68CZ6 603 aa11.23□□□□□ -0.61
ATG4A-206ENST00000457035 EFCAB12Q6NXP0 572 aa11.23□□□□□ -0.61
ATG4A-206ENST00000457035 LRRC8DQ7L1W4 858 aa11.23□□□□□ -0.61
ATG4A-206ENST00000457035 CEP170P1Q96L14 293 aa11.23□□□□□ -0.61
ATG4A-206ENST00000457035 AK8Q96MA6 479 aa11.23□□□□□ -0.61
ATG4A-206ENST00000457035 OSBPL7Q9BZF2 842 aa11.23□□□□□ -0.61
ATG4A-206ENST00000457035 FAM49AQ9H0Q0 323 aaPredicted RBP11.23□□□□□ -0.61
ATG4A-206ENST00000457035 DHX33Q9H6R0 707 aaKnown RBP11.23□□□□□ -0.61
ATG4A-206ENST00000457035 KIAA1024Q9UPX6 916 aa11.23□□□□□ -0.61
ATG4A-206ENST00000457035 PPME1Q9Y570 386 aa11.23□□□□□ -0.61
ATG4A-206ENST00000457035 SPTLC2O15270 562 aa11.22□□□□□ -0.61
ATG4A-206ENST00000457035 NBNO60934 754 aa11.22□□□□□ -0.61
ATG4A-206ENST00000457035 PARNO95453 639 aaKnown RBP11.22□□□□□ -0.61
ATG4A-206ENST00000457035 YEATS4O95619 227 aa11.22□□□□□ -0.61
ATG4A-206ENST00000457035 CXCL10P02778 98 aa11.22□□□□□ -0.61
ATG4A-206ENST00000457035 RPLP2P05387 115 aaKnown RBP11.22□□□□□ -0.61
ATG4A-206ENST00000457035 RFC2P35250 354 aa11.22□□□□□ -0.61
ATG4A-206ENST00000457035 RARRES1P49788 294 aa11.22□□□□□ -0.61
ATG4A-206ENST00000457035 NUCB2P80303 420 aa11.22□□□□□ -0.61
ATG4A-206ENST00000457035 MGAT3Q09327 533 aa11.22□□□□□ -0.61
ATG4A-206ENST00000457035 PPIGQ13427 754 aaKnown RBP eCLIP11.22□□□□□ -0.61
ATG4A-206ENST00000457035 DRP2Q13474 957 aa11.22□□□□□ -0.61
ATG4A-206ENST00000457035 STK38Q15208 465 aa11.22□□□□□ -0.61
ATG4A-206ENST00000457035 GPR153Q6NV75 609 aa11.22□□□□□ -0.61
ATG4A-206ENST00000457035 USP49Q70CQ1 688 aa11.22□□□□□ -0.61
ATG4A-206ENST00000457035 RSPH3Q86UC2 560 aa11.22□□□□□ -0.61
ATG4A-206ENST00000457035 RPUSD2Q8IZ73 545 aaKnown RBP11.22□□□□□ -0.61
ATG4A-206ENST00000457035 METTL13Q8N6R0 699 aa11.22□□□□□ -0.61
ATG4A-206ENST00000457035 SNX29Q8TEQ0 813 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms