RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 VWCEQ96DN2 955 aa15.69■□□□□ 0.1
TIMP1-205ENST00000456754 NACC1Q96RE7 527 aa15.69■□□□□ 0.1
TIMP1-205ENST00000456754 RUSC1Q9BVN2 902 aa15.69■□□□□ 0.1
TIMP1-205ENST00000456754 CCSER1Q9C0I3 900 aa15.69■□□□□ 0.1
TIMP1-205ENST00000456754 GOLPH3LQ9H4A5 285 aa15.69■□□□□ 0.1
TIMP1-205ENST00000456754 CDHR5Q9HBB8 845 aa15.69■□□□□ 0.1
TIMP1-205ENST00000456754 GPRC5CQ9NQ84 441 aa15.69■□□□□ 0.1
TIMP1-205ENST00000456754 ANKEF1Q9NU02 776 aa15.69■□□□□ 0.1
TIMP1-205ENST00000456754 NPHP3-ACAD11A0A0J9YXS1 232 aa15.68■□□□□ 0.1
TIMP1-205ENST00000456754 H0YGN5 161 aa15.68■□□□□ 0.1
TIMP1-205ENST00000456754 DKC1O60832 514 aaKnown RBP eCLIP15.68■□□□□ 0.1
TIMP1-205ENST00000456754 GNAT1P11488 350 aa15.68■□□□□ 0.1
TIMP1-205ENST00000456754 CKBP12277 381 aa15.68■□□□□ 0.1
TIMP1-205ENST00000456754 MDM2Q00987 491 aaPredicted RBP15.68■□□□□ 0.1
TIMP1-205ENST00000456754 MCM6Q14566 821 aa15.68■□□□□ 0.1
TIMP1-205ENST00000456754 GPNMBQ14956 572 aa15.68■□□□□ 0.1
TIMP1-205ENST00000456754 EMC2Q15006 297 aa15.68■□□□□ 0.1
TIMP1-205ENST00000456754 RESP18Q5W5W9 173 aa15.68■□□□□ 0.1
TIMP1-205ENST00000456754 KSR1Q8IVT5 923 aa15.68■□□□□ 0.1
TIMP1-205ENST00000456754 RASSF8Q8NHQ8 419 aa15.68■□□□□ 0.1
TIMP1-205ENST00000456754 BADQ92934 168 aa15.68■□□□□ 0.1
TIMP1-205ENST00000456754 CDK5RAP3Q96JB5 506 aa15.68■□□□□ 0.1
TIMP1-205ENST00000456754 SEZ6LQ9BYH1 1024 aa15.68■□□□□ 0.1
TIMP1-205ENST00000456754 DHX33Q9H6R0 707 aaKnown RBP15.68■□□□□ 0.1
TIMP1-205ENST00000456754 DBR1Q9UK59 544 aaKnown RBP15.68■□□□□ 0.1
TIMP1-205ENST00000456754 IGKV6-21A0A0C4DH24 114 aa15.67■□□□□ 0.1
TIMP1-205ENST00000456754 A0A1B0GVL5 298 aa15.67■□□□□ 0.1
TIMP1-205ENST00000456754 ARHGEF35A5YM69 484 aa15.67■□□□□ 0.1
TIMP1-205ENST00000456754 GADD45BO75293 160 aaPredicted RBP15.67■□□□□ 0.1
TIMP1-205ENST00000456754 MAFO75444 373 aaPredicted RBP15.67■□□□□ 0.1
TIMP1-205ENST00000456754 EYA4O95677 639 aa15.67■□□□□ 0.1
TIMP1-205ENST00000456754 CHRNA1P02708 482 aa15.67■□□□□ 0.1
TIMP1-205ENST00000456754 SSBP05455 408 aaKnown RBP eCLIP15.67■□□□□ 0.1
TIMP1-205ENST00000456754 POLGP54098 1239 aaPredicted RBP15.67■□□□□ 0.1
TIMP1-205ENST00000456754 EPHB4P54760 987 aa15.67■□□□□ 0.1
TIMP1-205ENST00000456754 CACNB1Q02641 598 aaPredicted RBP15.67■□□□□ 0.1
TIMP1-205ENST00000456754 RAD51AP2Q09MP3 1159 aa15.67■□□□□ 0.1
TIMP1-205ENST00000456754 TCTN1Q2MV58 587 aa15.67■□□□□ 0.1
TIMP1-205ENST00000456754 PADI6Q6TGC4 694 aa15.67■□□□□ 0.1
TIMP1-205ENST00000456754 OTUD6AQ7L8S5 288 aa15.67■□□□□ 0.1
TIMP1-205ENST00000456754 CALML4Q96GE6 196 aa15.67■□□□□ 0.1
TIMP1-205ENST00000456754 SCAND2PQ9GZW5 306 aaPredicted RBP15.67■□□□□ 0.1
TIMP1-205ENST00000456754 KDM3AQ9Y4C1 1321 aa15.67■□□□□ 0.1
TIMP1-205ENST00000456754 SMIM35A0A1B0GVV1 85 aa15.66■□□□□ 0.1
TIMP1-205ENST00000456754 TIMP1P01033 207 aa15.66■□□□□ 0.1
TIMP1-205ENST00000456754 PLA2G4BP0C869 781 aa15.66■□□□□ 0.1
TIMP1-205ENST00000456754 RAG1P15918 1043 aa15.66■□□□□ 0.1
TIMP1-205ENST00000456754 SLC12A3P55017 1021 aa15.66■□□□□ 0.1
TIMP1-205ENST00000456754 MGAT3Q09327 533 aa15.66■□□□□ 0.1
TIMP1-205ENST00000456754 ASAP3Q8TDY4 903 aa15.66■□□□□ 0.1
TIMP1-205ENST00000456754 RAD54LQ92698 747 aa15.66■□□□□ 0.1
TIMP1-205ENST00000456754 STAMQ92783 540 aa15.66■□□□□ 0.1
TIMP1-205ENST00000456754 CCDC43Q96MW1 224 aaKnown RBP15.66■□□□□ 0.1
TIMP1-205ENST00000456754 DNM3Q9UQ16 869 aa15.66■□□□□ 0.1
TIMP1-205ENST00000456754 GINS2Q9Y248 185 aa15.66■□□□□ 0.1
TIMP1-205ENST00000456754 CDY2AQ9Y6F7 541 aa15.66■□□□□ 0.1
TIMP1-205ENST00000456754 MAGEB2O15479 319 aa15.65■□□□□ 0.1
TIMP1-205ENST00000456754 NBNO60934 754 aa15.65■□□□□ 0.1
TIMP1-205ENST00000456754 IQCF3P0C7M6 154 aa15.65■□□□□ 0.1
TIMP1-205ENST00000456754 ACRP10323 421 aa15.65■□□□□ 0.1
TIMP1-205ENST00000456754 XRCC6P12956 609 aaKnown RBP eCLIP15.65■□□□□ 0.1
TIMP1-205ENST00000456754 CSF2RAP15509 400 aa15.65■□□□□ 0.1
TIMP1-205ENST00000456754 SELPP16109 830 aa15.65■□□□□ 0.1
TIMP1-205ENST00000456754 PFKFB1P16118 471 aa15.65■□□□□ 0.1
TIMP1-205ENST00000456754 MUTP22033 750 aa15.65■□□□□ 0.1
TIMP1-205ENST00000456754 MRPS6P82932 125 aaKnown RBP15.65■□□□□ 0.1
TIMP1-205ENST00000456754 RBL2Q08999 1139 aa15.65■□□□□ 0.1
TIMP1-205ENST00000456754 E2F4Q16254 413 aa15.65■□□□□ 0.1
TIMP1-205ENST00000456754 KIZQ2M2Z5 673 aa15.65■□□□□ 0.1
TIMP1-205ENST00000456754 ARSHQ5FYA8 562 aa15.65■□□□□ 0.1
TIMP1-205ENST00000456754 RRAGBQ5VZM2 374 aa15.65■□□□□ 0.1
TIMP1-205ENST00000456754 ADALQ6DHV7 355 aa15.65■□□□□ 0.1
TIMP1-205ENST00000456754 RINT1Q6NUQ1 792 aa15.65■□□□□ 0.1
TIMP1-205ENST00000456754 TAF2Q6P1X5 1199 aa15.65■□□□□ 0.1
TIMP1-205ENST00000456754 LRRC8DQ7L1W4 858 aa15.65■□□□□ 0.1
TIMP1-205ENST00000456754 DEFB128Q7Z7B8 93 aa15.65■□□□□ 0.1
TIMP1-205ENST00000456754 TMEM40Q8WWA1 233 aa15.65■□□□□ 0.1
TIMP1-205ENST00000456754 BSNDQ8WZ55 320 aa15.65■□□□□ 0.1
TIMP1-205ENST00000456754 DHX58Q96C10 678 aa15.65■□□□□ 0.1
TIMP1-205ENST00000456754 SUCLA2Q9P2R7 463 aaPredicted RBP15.65■□□□□ 0.1
TIMP1-205ENST00000456754 AKT3Q9Y243 479 aa15.65■□□□□ 0.1
TIMP1-205ENST00000456754 STK24Q9Y6E0 443 aa15.65■□□□□ 0.1
TIMP1-205ENST00000456754 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.64■□□□□ 0.09
TIMP1-205ENST00000456754 RSPH10B2B2RC85 870 aa15.64■□□□□ 0.09
TIMP1-205ENST00000456754 POLR2DO15514 142 aaKnown RBP15.64■□□□□ 0.09
TIMP1-205ENST00000456754 GPR32O75388 356 aa15.64■□□□□ 0.09
TIMP1-205ENST00000456754 CSDE1O75534 798 aaKnown RBP15.64■□□□□ 0.09
TIMP1-205ENST00000456754 RSPH10BP0C881 870 aa15.64■□□□□ 0.09
TIMP1-205ENST00000456754 RFC5P40937 340 aa15.64■□□□□ 0.09
TIMP1-205ENST00000456754 STAT6P42226 847 aa15.64■□□□□ 0.09
TIMP1-205ENST00000456754 MAGEA10P43363 369 aaPredicted RBP15.64■□□□□ 0.09
TIMP1-205ENST00000456754 NDUFA8P51970 172 aa15.64■□□□□ 0.09
TIMP1-205ENST00000456754 BFSP2Q13515 415 aa15.64■□□□□ 0.09
TIMP1-205ENST00000456754 C1orf186Q6ZWK4 172 aa15.64■□□□□ 0.09
TIMP1-205ENST00000456754 RHPN2Q8IUC4 686 aa15.64■□□□□ 0.09
TIMP1-205ENST00000456754 GRAMD1CQ8IYS0 662 aa15.64■□□□□ 0.09
TIMP1-205ENST00000456754 DAW1Q8N136 415 aa15.64■□□□□ 0.09
TIMP1-205ENST00000456754 SYT2Q8N9I0 419 aaPredicted RBP15.64■□□□□ 0.09
TIMP1-205ENST00000456754 FSIP1Q8NA03 581 aa15.64■□□□□ 0.09
TIMP1-205ENST00000456754 CAGE1Q8TC20 777 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms