RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 OR52Z1P0C646 297 aa20.24■□□□□ 0.83
PDLIM2-215ENST00000456545 FOSL2P15408 326 aa20.24■□□□□ 0.83
PDLIM2-215ENST00000456545 NLRP11P59045 1033 aaKnown RBP20.24■□□□□ 0.83
PDLIM2-215ENST00000456545 TARBP2Q15633 366 aaKnown RBP20.24■□□□□ 0.83
PDLIM2-215ENST00000456545 TMEM266Q2M3C6 531 aa20.24■□□□□ 0.83
PDLIM2-215ENST00000456545 PLA2G4FQ68DD2 849 aa20.24■□□□□ 0.83
PDLIM2-215ENST00000456545 C4orf19Q8IY42 314 aa20.24■□□□□ 0.83
PDLIM2-215ENST00000456545 NEK9Q8TD19 979 aa20.24■□□□□ 0.83
PDLIM2-215ENST00000456545 CCDC43Q96MW1 224 aaKnown RBP20.24■□□□□ 0.83
PDLIM2-215ENST00000456545 TMEM60Q9H2L4 133 aa20.24■□□□□ 0.83
PDLIM2-215ENST00000456545 PRDM12Q9H4Q4 367 aa20.24■□□□□ 0.83
PDLIM2-215ENST00000456545 CDHR5Q9HBB8 845 aa20.24■□□□□ 0.83
PDLIM2-215ENST00000456545 INSL6Q9Y581 213 aa20.24■□□□□ 0.83
PDLIM2-215ENST00000456545 ENPP3O14638 875 aa20.23■□□□□ 0.83
PDLIM2-215ENST00000456545 GPR182O15218 404 aa20.23■□□□□ 0.83
PDLIM2-215ENST00000456545 STBD1O95210 358 aa20.23■□□□□ 0.83
PDLIM2-215ENST00000456545 YWHABP31946 246 aaKnown RBP20.23■□□□□ 0.83
PDLIM2-215ENST00000456545 TECP42680 631 aa20.23■□□□□ 0.83
PDLIM2-215ENST00000456545 CDC42EP1Q00587 391 aa20.23■□□□□ 0.83
PDLIM2-215ENST00000456545 SPIRE1Q08AE8 756 aa20.23■□□□□ 0.83
PDLIM2-215ENST00000456545 XKR9Q5GH70 373 aa20.23■□□□□ 0.83
PDLIM2-215ENST00000456545 ANO5Q75V66 913 aa20.23■□□□□ 0.83
PDLIM2-215ENST00000456545 SLC7A3Q8WY07 619 aa20.23■□□□□ 0.83
PDLIM2-215ENST00000456545 TOP1MTQ969P6 601 aa20.23■□□□□ 0.83
PDLIM2-215ENST00000456545 YME1L1Q96TA2 773 aa20.23■□□□□ 0.83
PDLIM2-215ENST00000456545 OSMRQ99650 979 aa20.23■□□□□ 0.83
PDLIM2-215ENST00000456545 CERS4Q9HA82 394 aa20.23■□□□□ 0.83
PDLIM2-215ENST00000456545 CYP26B1Q9NR63 512 aa20.23■□□□□ 0.83
PDLIM2-215ENST00000456545 NOC2LQ9Y3T9 749 aaKnown RBP20.23■□□□□ 0.83
PDLIM2-215ENST00000456545 MICAL3Q7RTP6 2002 aa20.22■□□□□ 0.83
PDLIM2-215ENST00000456545 LAMA3Q16787 3333 aa20.22■□□□□ 0.83
PDLIM2-215ENST00000456545 LOXHD1Q8IVV2 1947 aa20.22■□□□□ 0.83
PDLIM2-215ENST00000456545 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.22■□□□□ 0.83
PDLIM2-215ENST00000456545 MAFO75444 373 aaPredicted RBP20.22■□□□□ 0.83
PDLIM2-215ENST00000456545 SLITRK3O94933 977 aa20.22■□□□□ 0.83
PDLIM2-215ENST00000456545 IBSPP21815 317 aaPredicted RBP20.22■□□□□ 0.83
PDLIM2-215ENST00000456545 POLGP54098 1239 aaPredicted RBP20.22■□□□□ 0.83
PDLIM2-215ENST00000456545 NPEPPSP55786 919 aa20.22■□□□□ 0.83
PDLIM2-215ENST00000456545 ERMNQ8TAM6 284 aa20.22■□□□□ 0.83
PDLIM2-215ENST00000456545 NLRP7Q8WX94 980 aa20.22■□□□□ 0.83
PDLIM2-215ENST00000456545 ZNF668Q96K58 619 aaPredicted RBP20.22■□□□□ 0.83
PDLIM2-215ENST00000456545 PPME1Q9Y570 386 aa20.22■□□□□ 0.83
PDLIM2-215ENST00000456545 DENND3A2RUS2 1198 aa20.21■□□□□ 0.83
PDLIM2-215ENST00000456545 GPR32O75388 356 aa20.21■□□□□ 0.83
PDLIM2-215ENST00000456545 IGFBP4P22692 258 aa20.21■□□□□ 0.83
PDLIM2-215ENST00000456545 SUCLA2Q9P2R7 463 aaPredicted RBP20.21■□□□□ 0.83
PDLIM2-215ENST00000456545 LRFN2Q9ULH4 789 aa20.21■□□□□ 0.83
PDLIM2-215ENST00000456545 ST3GAL5Q9UNP4 418 aa20.21■□□□□ 0.83
PDLIM2-215ENST00000456545 POTEMA6NI47 508 aa20.2■□□□□ 0.82
PDLIM2-215ENST00000456545 RFC5P40937 340 aa20.2■□□□□ 0.82
PDLIM2-215ENST00000456545 TAP1Q03518 808 aa20.2■□□□□ 0.82
PDLIM2-215ENST00000456545 CUL4AQ13619 759 aa20.2■□□□□ 0.82
PDLIM2-215ENST00000456545 NBR1Q14596 966 aa20.2■□□□□ 0.82
PDLIM2-215ENST00000456545 RILPL1Q5EBL4 403 aa20.2■□□□□ 0.82
PDLIM2-215ENST00000456545 FAM43BQ6ZT52 329 aaPredicted RBP20.2■□□□□ 0.82
PDLIM2-215ENST00000456545 RHPN2Q8IUC4 686 aa20.2■□□□□ 0.82
PDLIM2-215ENST00000456545 ARNTL2Q8WYA1 636 aa20.2■□□□□ 0.82
PDLIM2-215ENST00000456545 HSD17B14Q9BPX1 270 aa20.2■□□□□ 0.82
PDLIM2-215ENST00000456545 RAB34Q9BZG1 259 aa20.2■□□□□ 0.82
PDLIM2-215ENST00000456545 RNF216Q9NWF9 866 aaPredicted RBP20.2■□□□□ 0.82
PDLIM2-215ENST00000456545 WRAP73Q9P2S5 460 aaPredicted RBP20.2■□□□□ 0.82
PDLIM2-215ENST00000456545 PCDHB6Q9Y5E3 794 aa20.2■□□□□ 0.82
PDLIM2-215ENST00000456545 SIP14410 1827 aa20.2■□□□□ 0.82
PDLIM2-215ENST00000456545 LAMA2P24043 3122 aaKnown RBP20.2■□□□□ 0.82
PDLIM2-215ENST00000456545 LCHNA4D1U4 455 aa20.19■□□□□ 0.82
PDLIM2-215ENST00000456545 STAG3L1P0CL83 205 aa20.19■□□□□ 0.82
PDLIM2-215ENST00000456545 PDCP20941 246 aa20.19■□□□□ 0.82
PDLIM2-215ENST00000456545 EIF4BP23588 611 aaKnown RBP20.19■□□□□ 0.82
PDLIM2-215ENST00000456545 GPC3P51654 580 aa20.19■□□□□ 0.82
PDLIM2-215ENST00000456545 PTGDRQ13258 359 aa20.19■□□□□ 0.82
PDLIM2-215ENST00000456545 MKRN4PQ13434 485 aaPredicted RBP20.19■□□□□ 0.82
PDLIM2-215ENST00000456545 LINC01465Q8N7H1 131 aa20.19■□□□□ 0.82
PDLIM2-215ENST00000456545 TMEM40Q8WWA1 233 aa20.19■□□□□ 0.82
PDLIM2-215ENST00000456545 TCP11Q8WWU5 503 aa20.19■□□□□ 0.82
PDLIM2-215ENST00000456545 GCOM2Q9BZD3 368 aaPredicted RBP20.19■□□□□ 0.82
PDLIM2-215ENST00000456545 ERVK-5Q9HDB9 667 aa20.19■□□□□ 0.82
PDLIM2-215ENST00000456545 PTPRSQ13332 1948 aa20.19■□□□□ 0.82
PDLIM2-215ENST00000456545 IGKV6-21A0A0C4DH24 114 aa20.18■□□□□ 0.82
PDLIM2-215ENST00000456545 VPS37CA5D8V6 355 aaPredicted RBP20.18■□□□□ 0.82
PDLIM2-215ENST00000456545 K7ELQ4 463 aaPredicted RBP20.18■□□□□ 0.82
PDLIM2-215ENST00000456545 ZBTB39O15060 712 aa20.18■□□□□ 0.82
PDLIM2-215ENST00000456545 ZSCAN20P17040 1043 aaPredicted RBP20.18■□□□□ 0.82
PDLIM2-215ENST00000456545 TOB1P50616 345 aaPredicted RBP20.18■□□□□ 0.82
PDLIM2-215ENST00000456545 DRP2Q13474 957 aa20.18■□□□□ 0.82
PDLIM2-215ENST00000456545 ZNF579Q8NAF0 562 aaKnown RBP20.18■□□□□ 0.82
PDLIM2-215ENST00000456545 TGS1Q96RS0 853 aaKnown RBP20.18■□□□□ 0.82
PDLIM2-215ENST00000456545 CEP89Q96ST8 783 aa20.18■□□□□ 0.82
PDLIM2-215ENST00000456545 ADAM2Q99965 735 aa20.18■□□□□ 0.82
PDLIM2-215ENST00000456545 INO80BQ9C086 356 aaPredicted RBP20.18■□□□□ 0.82
PDLIM2-215ENST00000456545 ADAMTS10Q9H324 1103 aa20.18■□□□□ 0.82
PDLIM2-215ENST00000456545 TUFT1Q9NNX1 390 aa20.18■□□□□ 0.82
PDLIM2-215ENST00000456545 BMP2KQ9NSY1 1161 aaPredicted RBP20.18■□□□□ 0.82
PDLIM2-215ENST00000456545 ANKEF1Q9NU02 776 aa20.18■□□□□ 0.82
PDLIM2-215ENST00000456545 LRWD1Q9UFC0 647 aa20.18■□□□□ 0.82
PDLIM2-215ENST00000456545 MTUS1Q9ULD2 1270 aa20.18■□□□□ 0.82
PDLIM2-215ENST00000456545 PCDHB7Q9Y5E2 793 aa20.18■□□□□ 0.82
PDLIM2-215ENST00000456545 SZT2Q5T011 3432 aa20.18■□□□□ 0.82
PDLIM2-215ENST00000456545 LAD1O00515 517 aa20.17■□□□□ 0.82
PDLIM2-215ENST00000456545 LYPLA2O95372 231 aa20.17■□□□□ 0.82
PDLIM2-215ENST00000456545 HTRA4P83105 476 aaPredicted RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms