RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 KCNT2Q6UVM3 1135 aa26.48■■□□□ 1.83
PTPRA-208ENST00000455631 LRRC43Q8N309 656 aa26.48■■□□□ 1.83
PTPRA-208ENST00000455631 CCDC82Q8N4S0 544 aa26.48■■□□□ 1.83
PTPRA-208ENST00000455631 ZNF558Q96NG5 402 aa26.48■■□□□ 1.83
PTPRA-208ENST00000455631 AGO4Q9HCK5 861 aaKnown RBP26.48■■□□□ 1.83
PTPRA-208ENST00000455631 HCFC2Q9Y5Z7 792 aa26.48■■□□□ 1.83
PTPRA-208ENST00000455631 COL1A2P08123 1366 aa26.47■■□□□ 1.83
PTPRA-208ENST00000455631 ATG7O95352 703 aa26.47■■□□□ 1.83
PTPRA-208ENST00000455631 GSPT1P15170 499 aaKnown RBP26.47■■□□□ 1.83
PTPRA-208ENST00000455631 FAM160B1Q5W0V3 765 aa26.47■■□□□ 1.83
PTPRA-208ENST00000455631 LRRC55Q6ZSA7 311 aa26.47■■□□□ 1.83
PTPRA-208ENST00000455631 RAB11FIP4Q86YS3 637 aa26.47■■□□□ 1.83
PTPRA-208ENST00000455631 ABI1Q8IZP0 508 aa26.47■■□□□ 1.83
PTPRA-208ENST00000455631 PGBD1Q96JS3 809 aa26.47■■□□□ 1.83
PTPRA-208ENST00000455631 ADAM7Q9H2U9 754 aa26.47■■□□□ 1.83
PTPRA-208ENST00000455631 MFSD1Q9H3U5 465 aa26.47■■□□□ 1.83
PTPRA-208ENST00000455631 HOXA2O43364 376 aa26.46■■□□□ 1.83
PTPRA-208ENST00000455631 PRC1O43663 620 aa26.46■■□□□ 1.83
PTPRA-208ENST00000455631 CA8P35219 290 aa26.46■■□□□ 1.83
PTPRA-208ENST00000455631 CRYBB1P53674 252 aaPredicted RBP26.46■■□□□ 1.83
PTPRA-208ENST00000455631 FAM189BP81408 668 aa26.46■■□□□ 1.83
PTPRA-208ENST00000455631 ITIH3Q06033 890 aa26.46■■□□□ 1.83
PTPRA-208ENST00000455631 SMC1AQ14683 1233 aaKnown RBP26.46■■□□□ 1.83
PTPRA-208ENST00000455631 CEP55Q53EZ4 464 aa26.46■■□□□ 1.83
PTPRA-208ENST00000455631 CASD1Q96PB1 797 aa26.46■■□□□ 1.83
PTPRA-208ENST00000455631 IGKV6D-21A0A0A0MT36 114 aa26.45■■□□□ 1.82
PTPRA-208ENST00000455631 CCNE2O96020 404 aa26.45■■□□□ 1.82
PTPRA-208ENST00000455631 ASGR2P07307 311 aa26.45■■□□□ 1.82
PTPRA-208ENST00000455631 TTC22Q5TAA0 569 aa26.45■■□□□ 1.82
PTPRA-208ENST00000455631 ASTLQ6HA08 431 aaPredicted RBP26.45■■□□□ 1.82
PTPRA-208ENST00000455631 PDXDC2PQ6P474 469 aa26.45■■□□□ 1.82
PTPRA-208ENST00000455631 CCDC60Q8IWA6 550 aaPredicted RBP26.45■■□□□ 1.82
PTPRA-208ENST00000455631 SPG21Q9NZD8 308 aa26.45■■□□□ 1.82
PTPRA-208ENST00000455631 SPTBN4Q9H254 2564 aa26.45■■□□□ 1.82
PTPRA-208ENST00000455631 SH2B2O14492 632 aaPredicted RBP26.44■■□□□ 1.82
PTPRA-208ENST00000455631 VTNP04004 478 aa26.44■■□□□ 1.82
PTPRA-208ENST00000455631 WEE2P0C1S8 567 aa26.44■■□□□ 1.82
PTPRA-208ENST00000455631 CALM1P0DP23 149 aa26.44■■□□□ 1.82
PTPRA-208ENST00000455631 CALM2P0DP24 149 aa26.44■■□□□ 1.82
PTPRA-208ENST00000455631 CALM3P0DP25 149 aa26.44■■□□□ 1.82
PTPRA-208ENST00000455631 DSC3Q14574 896 aa26.44■■□□□ 1.82
PTPRA-208ENST00000455631 ZNF484Q5JVG2 852 aa26.44■■□□□ 1.82
PTPRA-208ENST00000455631 FRMD5Q7Z6J6 570 aa26.44■■□□□ 1.82
PTPRA-208ENST00000455631 TDRD5Q8NAT2 981 aaKnown RBP26.44■■□□□ 1.82
PTPRA-208ENST00000455631 NKD2Q969F2 451 aaPredicted RBP26.44■■□□□ 1.82
PTPRA-208ENST00000455631 ZNF302Q9NR11 478 aa26.44■■□□□ 1.82
PTPRA-208ENST00000455631 RNF19AQ9NV58 838 aa26.44■■□□□ 1.82
PTPRA-208ENST00000455631 ZBTB42B2RXF5 422 aa26.43■■□□□ 1.82
PTPRA-208ENST00000455631 CHMLP26374 656 aa26.43■■□□□ 1.82
PTPRA-208ENST00000455631 MTHFRP42898 656 aa26.43■■□□□ 1.82
PTPRA-208ENST00000455631 ABHD15Q6UXT9 468 aa26.43■■□□□ 1.82
PTPRA-208ENST00000455631 CKAP2LQ8IYA6 745 aa26.43■■□□□ 1.82
PTPRA-208ENST00000455631 TMTC2Q8N394 836 aa26.43■■□□□ 1.82
PTPRA-208ENST00000455631 METTL13Q8N6R0 699 aa26.43■■□□□ 1.82
PTPRA-208ENST00000455631 FAM186AA6NE01 2351 aa26.43■■□□□ 1.82
PTPRA-208ENST00000455631 C2orf71A6NGG8 1288 aa26.42■■□□□ 1.82
PTPRA-208ENST00000455631 GPR32O75388 356 aa26.42■■□□□ 1.82
PTPRA-208ENST00000455631 C22orf31O95567 290 aa26.42■■□□□ 1.82
PTPRA-208ENST00000455631 RARS2Q5T160 578 aaKnown RBP26.42■■□□□ 1.82
PTPRA-208ENST00000455631 MCTP2Q6DN12 878 aa26.42■■□□□ 1.82
PTPRA-208ENST00000455631 TMTC3Q6ZXV5 915 aa26.42■■□□□ 1.82
PTPRA-208ENST00000455631 MRPL43Q8N983 215 aaKnown RBP26.42■■□□□ 1.82
PTPRA-208ENST00000455631 RNF169Q8NCN4 708 aa26.42■■□□□ 1.82
PTPRA-208ENST00000455631 MTA3Q9BTC8 594 aa26.42■■□□□ 1.82
PTPRA-208ENST00000455631 ANO3Q9BYT9 981 aa26.42■■□□□ 1.82
PTPRA-208ENST00000455631 CLASP2O75122 1294 aaKnown RBP26.41■■□□□ 1.82
PTPRA-208ENST00000455631 MCM5P33992 734 aa26.41■■□□□ 1.82
PTPRA-208ENST00000455631 NAPAP54920 295 aa26.41■■□□□ 1.82
PTPRA-208ENST00000455631 WWC2Q6AWC2 1192 aa26.41■■□□□ 1.82
PTPRA-208ENST00000455631 MIS18BP1Q6P0N0 1132 aa26.41■■□□□ 1.82
PTPRA-208ENST00000455631 ERMP1Q7Z2K6 904 aa26.41■■□□□ 1.82
PTPRA-208ENST00000455631 TRMT1LQ7Z2T5 733 aaKnown RBP26.41■■□□□ 1.82
PTPRA-208ENST00000455631 SLC39A11Q8N1S5 342 aa26.41■■□□□ 1.82
PTPRA-208ENST00000455631 TMEM87BQ96K49 555 aa26.41■■□□□ 1.82
PTPRA-208ENST00000455631 LIMD1Q9UGP4 676 aa26.41■■□□□ 1.82
PTPRA-208ENST00000455631 DBR1Q9UK59 544 aaKnown RBP26.41■■□□□ 1.82
PTPRA-208ENST00000455631 RBM8AQ9Y5S9 174 aaKnown RBP26.41■■□□□ 1.82
PTPRA-208ENST00000455631 SLC12A7Q9Y666 1083 aa26.41■■□□□ 1.82
PTPRA-208ENST00000455631 RIF1Q5UIP0 2472 aaKnown RBP26.41■■□□□ 1.82
PTPRA-208ENST00000455631 MEIS1O00470 390 aa26.4■■□□□ 1.82
PTPRA-208ENST00000455631 ZSCAN20P17040 1043 aaPredicted RBP26.4■■□□□ 1.82
PTPRA-208ENST00000455631 ZNF76P36508 570 aa26.4■■□□□ 1.82
PTPRA-208ENST00000455631 SWSAP1Q6NVH7 229 aa26.4■■□□□ 1.82
PTPRA-208ENST00000455631 C12orf76Q8N812 135 aaPredicted RBP26.4■■□□□ 1.82
PTPRA-208ENST00000455631 RIC8AQ9NPQ8 531 aa26.4■■□□□ 1.82
PTPRA-208ENST00000455631 MYH9P35579 1960 aaKnown RBP26.4■■□□□ 1.82
PTPRA-208ENST00000455631 SGSM2O43147 1006 aa26.39■■□□□ 1.82
PTPRA-208ENST00000455631 FOSP01100 380 aaPredicted RBP26.39■■□□□ 1.82
PTPRA-208ENST00000455631 ATP4AP20648 1035 aa26.39■■□□□ 1.82
PTPRA-208ENST00000455631 ID4P47928 161 aa26.39■■□□□ 1.82
PTPRA-208ENST00000455631 CLCN5P51795 746 aa26.39■■□□□ 1.82
PTPRA-208ENST00000455631 MICU3Q86XE3 530 aa26.39■■□□□ 1.82
PTPRA-208ENST00000455631 ECHDC2Q86YB7 292 aa26.39■■□□□ 1.82
PTPRA-208ENST00000455631 ZDHHC14Q8IZN3 488 aa26.39■■□□□ 1.82
PTPRA-208ENST00000455631 ADSSL1Q8N142 457 aa26.39■■□□□ 1.82
PTPRA-208ENST00000455631 FLCNQ8NFG4 579 aa26.39■■□□□ 1.82
PTPRA-208ENST00000455631 MAP4K1Q92918 833 aa26.39■■□□□ 1.82
PTPRA-208ENST00000455631 METAP2P50579 478 aaKnown RBP eCLIP26.38■■□□□ 1.81
PTPRA-208ENST00000455631 CLCN3P51790 818 aa26.38■■□□□ 1.81
PTPRA-208ENST00000455631 ADCY7P51828 1080 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms