RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 RNPEPQ9H4A4 650 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 ADD3Q9UEY8 706 aaKnown RBP5.56□□□□□ -1.52
RIF1-207ENST00000454583 UBE4BO95155 1302 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 MSCO60682 206 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 ALAS1P13196 640 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 SFNP31947 248 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 TECP42680 631 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 DSC3Q14574 896 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 ANO6Q4KMQ2 910 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 SPECC1Q5M775 1068 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 BANK1Q8NDB2 785 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 NUP62CLQ9H1M0 184 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 EHMT1Q9H9B1 1298 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 RNF19AQ9NV58 838 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 TMEM150BA6NC51 233 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 CPLX1O14810 134 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 TBC1D8O95759 1140 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 FCER1AP12319 257 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 PNOCQ13519 176 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 KCNV1Q6PIU1 500 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 POTEGQ6S5H5 508 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 EFCAB3Q8N7B9 438 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 TMEM161BQ8NDZ6 487 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 SPIRE2Q8WWL2 714 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 DYDC2Q96IM9 177 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 SIX2Q9NPC8 291 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 RGL1Q9NZL6 768 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 PYCARDQ9ULZ3 195 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 CNTNAP2Q9UHC6 1331 aa5.56□□□□□ -1.52
RIF1-207ENST00000454583 VPS37CA5D8V6 355 aaPredicted RBP5.55□□□□□ -1.52
RIF1-207ENST00000454583 E9PMD0 336 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 MAPK13O15264 365 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 ADCY5O95622 1261 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 ADCYAP1R1P41586 468 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 JAK3P52333 1124 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 PRMT2P55345 433 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 STK4Q13043 487 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 LETM2Q2VYF4 491 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 RASIP1Q5U651 963 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 FOXD4L5Q5VV16 416 aaPredicted RBP5.55□□□□□ -1.52
RIF1-207ENST00000454583 UNC13DQ70J99 1090 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 LUZP1Q86V48 1076 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 FOXD4L4Q8WXT5 416 aaPredicted RBP5.55□□□□□ -1.52
RIF1-207ENST00000454583 GSDMAQ96QA5 445 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 REEP2Q9BRK0 252 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 ABHD16BQ9H3Z7 469 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 FZD8Q9H461 694 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 PCDHA5Q9Y5H7 936 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 MUC3AQ02505 3323 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 NPHP3-ACAD11A0A0J9YXS1 232 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 RSPH10B2B2RC85 870 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 RSPH10BP0C881 870 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 EIF2AK2P19525 551 aaKnown RBP5.55□□□□□ -1.52
RIF1-207ENST00000454583 KRT76Q01546 638 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 UBXN11Q5T124 520 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 ARMCX5Q6P1M9 558 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 ANKRD33Q7Z3H0 272 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 ZSWIM2Q8NEG5 633 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 LINC01599Q8WXQ3 324 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 CXCL16Q9H2A7 254 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 IKZF4Q9H2S9 585 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 ZFYVE28Q9HCC9 887 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 SLC5A4Q9NY91 659 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 ODF2LQ9ULJ1 636 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 SCN8AQ9UQD0 1980 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 A0A087WWV3 80 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 ASB14A6NK59 587 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 EIF3DO15371 548 aaKnown RBP eCLIP5.55□□□□□ -1.52
RIF1-207ENST00000454583 DUSP11O75319 330 aaKnown RBP5.55□□□□□ -1.52
RIF1-207ENST00000454583 CFBP00751 764 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 LGALS2P05162 132 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 HOXA11P31270 313 aaPredicted RBP5.55□□□□□ -1.52
RIF1-207ENST00000454583 UBXN2AP68543 259 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 MBTD1Q05BQ5 628 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 POSTNQ15063 836 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 STXBP2Q15833 593 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 ZBTB6Q15916 424 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 KMT5BQ4FZB7 885 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 PRR16Q569H4 304 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 ZNF658Q5TYW1 1059 aaPredicted RBP5.55□□□□□ -1.52
RIF1-207ENST00000454583 ZNF720Q7Z2F6 126 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 RNF168Q8IYW5 571 aaPredicted RBP5.55□□□□□ -1.52
RIF1-207ENST00000454583 LENG1Q96BZ8 264 aaPredicted RBP5.55□□□□□ -1.52
RIF1-207ENST00000454583 LXNQ9BS40 222 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 TSEN34Q9BSV6 310 aaKnown RBP5.55□□□□□ -1.52
RIF1-207ENST00000454583 TIPINQ9BVW5 301 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 JPH1Q9HDC5 661 aaPredicted RBP5.55□□□□□ -1.52
RIF1-207ENST00000454583 TOMM22Q9NS69 142 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 SLC9A2Q9UBY0 812 aa5.55□□□□□ -1.52
RIF1-207ENST00000454583 VWA3AA6NCI4 1184 aa5.54□□□□□ -1.52
RIF1-207ENST00000454583 SEPT4O43236 478 aa5.54□□□□□ -1.52
RIF1-207ENST00000454583 CXCL10P02778 98 aa5.54□□□□□ -1.52
RIF1-207ENST00000454583 P4HBP07237 508 aaKnown RBP5.54□□□□□ -1.52
RIF1-207ENST00000454583 KCNA1Q09470 495 aa5.54□□□□□ -1.52
RIF1-207ENST00000454583 NR1I3Q14994 352 aa5.54□□□□□ -1.52
RIF1-207ENST00000454583 GJC2Q5T442 439 aaPredicted RBP5.54□□□□□ -1.52
RIF1-207ENST00000454583 CABP7Q86V35 215 aa5.54□□□□□ -1.52
RIF1-207ENST00000454583 GSTCDQ8NEC7 633 aa5.54□□□□□ -1.52
RIF1-207ENST00000454583 ASAP3Q8TDY4 903 aa5.54□□□□□ -1.52
RIF1-207ENST00000454583 SYAP1Q96A49 352 aaPredicted RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms