RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 CCND3P30281 292 aaPredicted RBP11.83□□□□□ -0.52
PKP4-206ENST00000452162 ZNF76P36508 570 aa11.83□□□□□ -0.52
PKP4-206ENST00000452162 PSMC6P62333 389 aa11.83□□□□□ -0.52
PKP4-206ENST00000452162 MAN2A1Q16706 1144 aa11.83□□□□□ -0.52
PKP4-206ENST00000452162 MCF2L2Q86YR7 1114 aa11.83□□□□□ -0.52
PKP4-206ENST00000452162 SYT2Q8N9I0 419 aaPredicted RBP11.83□□□□□ -0.52
PKP4-206ENST00000452162 TRPV1Q8NER1 839 aa11.83□□□□□ -0.52
PKP4-206ENST00000452162 SYTL5Q8TDW5 730 aaPredicted RBP11.83□□□□□ -0.52
PKP4-206ENST00000452162 POLR3CQ9BUI4 534 aaPredicted RBP11.83□□□□□ -0.52
PKP4-206ENST00000452162 IRX2Q9BZI1 471 aaPredicted RBP11.83□□□□□ -0.52
PKP4-206ENST00000452162 RNF208Q9H0X6 261 aa11.83□□□□□ -0.52
PKP4-206ENST00000452162 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.83□□□□□ -0.52
PKP4-206ENST00000452162 SIK3Q9Y2K2 1263 aa11.83□□□□□ -0.52
PKP4-206ENST00000452162 V9GYY5 206 aaPredicted RBP11.83□□□□□ -0.52
PKP4-206ENST00000452162 EML1O00423 815 aa11.82□□□□□ -0.52
PKP4-206ENST00000452162 SNAI1O95863 264 aaPredicted RBP11.82□□□□□ -0.52
PKP4-206ENST00000452162 ARHGAP25P42331 645 aa11.82□□□□□ -0.52
PKP4-206ENST00000452162 ZBED6P86452 979 aa11.82□□□□□ -0.52
PKP4-206ENST00000452162 CACNB1Q02641 598 aaPredicted RBP11.82□□□□□ -0.52
PKP4-206ENST00000452162 FKBP15Q5T1M5 1219 aa11.82□□□□□ -0.52
PKP4-206ENST00000452162 MAMDC4Q6UXC1 1216 aa11.82□□□□□ -0.52
PKP4-206ENST00000452162 ARMCX2Q7L311 632 aa11.82□□□□□ -0.52
PKP4-206ENST00000452162 ZNF467Q7Z7K2 595 aaPredicted RBP11.82□□□□□ -0.52
PKP4-206ENST00000452162 NDST4Q9H3R1 872 aa11.82□□□□□ -0.52
PKP4-206ENST00000452162 AGPAT5Q9NUQ2 364 aa11.82□□□□□ -0.52
PKP4-206ENST00000452162 DNM3Q9UQ16 869 aa11.82□□□□□ -0.52
PKP4-206ENST00000452162 REXO2Q9Y3B8 237 aaKnown RBP11.82□□□□□ -0.52
PKP4-206ENST00000452162 RPTORQ8N122 1335 aa11.82□□□□□ -0.52
PKP4-206ENST00000452162 MEIS1O00470 390 aa11.82□□□□□ -0.52
PKP4-206ENST00000452162 NDUFA10O95299 355 aa11.82□□□□□ -0.52
PKP4-206ENST00000452162 CYBAP13498 195 aa11.82□□□□□ -0.52
PKP4-206ENST00000452162 TRIM21P19474 475 aaKnown RBP11.82□□□□□ -0.52
PKP4-206ENST00000452162 HSD17B4P51659 736 aa11.82□□□□□ -0.52
PKP4-206ENST00000452162 GIT2Q14161 759 aa11.82□□□□□ -0.52
PKP4-206ENST00000452162 ELF2Q15723 593 aa11.82□□□□□ -0.52
PKP4-206ENST00000452162 HERC4Q5GLZ8 1057 aaPredicted RBP11.82□□□□□ -0.52
PKP4-206ENST00000452162 ZC3H3Q8IXZ2 948 aaKnown RBP11.82□□□□□ -0.52
PKP4-206ENST00000452162 SCFD1Q8WVM8 642 aa11.82□□□□□ -0.52
PKP4-206ENST00000452162 SLC5A5Q92911 643 aa11.82□□□□□ -0.52
PKP4-206ENST00000452162 IQCDQ96DY2 449 aa11.82□□□□□ -0.52
PKP4-206ENST00000452162 TAAR1Q96RJ0 339 aa11.82□□□□□ -0.52
PKP4-206ENST00000452162 EIF2AK1Q9BQI3 630 aaKnown RBP11.82□□□□□ -0.52
PKP4-206ENST00000452162 KCTD10Q9H3F6 313 aa11.82□□□□□ -0.52
PKP4-206ENST00000452162 HMX1Q9NP08 348 aaPredicted RBP11.82□□□□□ -0.52
PKP4-206ENST00000452162 TBC1D7Q9P0N9 293 aa11.82□□□□□ -0.52
PKP4-206ENST00000452162 EPN1Q9Y6I3 576 aaPredicted RBP11.82□□□□□ -0.52
PKP4-206ENST00000452162 PSMD10O75832 226 aa11.81□□□□□ -0.52
PKP4-206ENST00000452162 ALDH5A1P51649 535 aaPredicted RBP11.81□□□□□ -0.52
PKP4-206ENST00000452162 SOX10P56693 466 aa11.81□□□□□ -0.52
PKP4-206ENST00000452162 FKBP3Q00688 224 aaKnown RBP11.81□□□□□ -0.52
PKP4-206ENST00000452162 GHRHRQ02643 423 aa11.81□□□□□ -0.52
PKP4-206ENST00000452162 KCTD17Q8N5Z5 321 aa11.81□□□□□ -0.52
PKP4-206ENST00000452162 CEP63Q96MT8 703 aa11.81□□□□□ -0.52
PKP4-206ENST00000452162 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.81□□□□□ -0.524e-7■■□□□ 14.3
PKP4-206ENST00000452162 EHMT1Q9H9B1 1298 aa11.81□□□□□ -0.52
PKP4-206ENST00000452162 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.81□□□□□ -0.52
PKP4-206ENST00000452162 CGNQ9P2M7 1197 aaKnown RBP11.81□□□□□ -0.52
PKP4-206ENST00000452162 MRFAP1Q9Y605 127 aa11.81□□□□□ -0.52
PKP4-206ENST00000452162 LRRC37A2A6NM11 1700 aa11.81□□□□□ -0.52
PKP4-206ENST00000452162 FRMPD3Q5JV73 1810 aa11.81□□□□□ -0.52
PKP4-206ENST00000452162 KIF5CO60282 957 aa11.81□□□□□ -0.52
PKP4-206ENST00000452162 CAPN15O75808 1086 aa11.81□□□□□ -0.52
PKP4-206ENST00000452162 KRT18P05783 430 aaKnown RBP11.81□□□□□ -0.52
PKP4-206ENST00000452162 RAD51AP2Q09MP3 1159 aa11.81□□□□□ -0.52
PKP4-206ENST00000452162 PPP2R5CQ13362 524 aa11.81□□□□□ -0.52
PKP4-206ENST00000452162 MSL3Q8N5Y2 521 aaKnown RBP11.81□□□□□ -0.52
PKP4-206ENST00000452162 HSD17B14Q9BPX1 270 aa11.81□□□□□ -0.52
PKP4-206ENST00000452162 REEP2Q9BRK0 252 aa11.81□□□□□ -0.52
PKP4-206ENST00000452162 TMEM106CQ9BVX2 250 aa11.81□□□□□ -0.52
PKP4-206ENST00000452162 PAK6Q9NQU5 681 aaPredicted RBP11.81□□□□□ -0.52
PKP4-206ENST00000452162 COL4A3BPQ9Y5P4 624 aa11.81□□□□□ -0.52
PKP4-206ENST00000452162 SYNGAP1Q96PV0 1343 aa11.8□□□□□ -0.52
PKP4-206ENST00000452162 TADA3O75528 432 aa11.8□□□□□ -0.52
PKP4-206ENST00000452162 EYA4O95677 639 aa11.8□□□□□ -0.52
PKP4-206ENST00000452162 ABL1P00519 1130 aa11.8□□□□□ -0.52
PKP4-206ENST00000452162 CNGA1P29973 690 aa11.8□□□□□ -0.52
PKP4-206ENST00000452162 CDK17Q00537 523 aa11.8□□□□□ -0.52
PKP4-206ENST00000452162 CYP4A11Q02928 519 aa11.8□□□□□ -0.52
PKP4-206ENST00000452162 TSR1Q2NL82 804 aaKnown RBP11.8□□□□□ -0.52
PKP4-206ENST00000452162 ARHGAP29Q52LW3 1261 aa11.8□□□□□ -0.52
PKP4-206ENST00000452162 CEP55Q53EZ4 464 aa11.8□□□□□ -0.52
PKP4-206ENST00000452162 LRCH2Q5VUJ6 765 aa11.8□□□□□ -0.52
PKP4-206ENST00000452162 EPM2AIP1Q7L775 607 aaPredicted RBP11.8□□□□□ -0.52
PKP4-206ENST00000452162 PCMTD1Q96MG8 357 aaPredicted RBP11.8□□□□□ -0.52
PKP4-206ENST00000452162 DEFB118Q96PH6 123 aa11.8□□□□□ -0.52
PKP4-206ENST00000452162 RMDN3Q96TC7 470 aa11.8□□□□□ -0.52
PKP4-206ENST00000452162 CARD6Q9BX69 1037 aa11.8□□□□□ -0.52
PKP4-206ENST00000452162 DNAH12Q6ZR08 3092 aa11.8□□□□□ -0.52
PKP4-206ENST00000452162 ASB14A6NK59 587 aa11.79□□□□□ -0.52
PKP4-206ENST00000452162 KIF20AO95235 890 aa11.79□□□□□ -0.52
PKP4-206ENST00000452162 ZNF865P0CJ78 1059 aaPredicted RBP11.79□□□□□ -0.52
PKP4-206ENST00000452162 HNRNPH3P31942 346 aaKnown RBP11.79□□□□□ -0.52
PKP4-206ENST00000452162 MARSP56192 900 aaKnown RBP11.79□□□□□ -0.52
PKP4-206ENST00000452162 ERCC6LQ2NKX8 1250 aa11.79□□□□□ -0.52
PKP4-206ENST00000452162 EEPD1Q7L9B9 569 aa11.79□□□□□ -0.52
PKP4-206ENST00000452162 NELFCDQ8IXH7 590 aa11.79□□□□□ -0.52
PKP4-206ENST00000452162 DNERQ8NFT8 737 aa11.79□□□□□ -0.52
PKP4-206ENST00000452162 MAF1Q9H063 256 aa11.79□□□□□ -0.52
PKP4-206ENST00000452162 KATNBL1Q9H079 304 aa11.79□□□□□ -0.52
PKP4-206ENST00000452162 TUFT1Q9NNX1 390 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms