RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 DBR1Q9UK59 544 aaKnown RBP9.91□□□□□ -0.82
COL8A1-203ENST00000452013 DNM3Q9UQ16 869 aa9.91□□□□□ -0.82
COL8A1-203ENST00000452013 GINS2Q9Y248 185 aa9.91□□□□□ -0.82
COL8A1-203ENST00000452013 BRCA2P51587 3418 aa9.91□□□□□ -0.82
COL8A1-203ENST00000452013 KIAA1217Q5T5P2 1943 aa9.9□□□□□ -0.82
COL8A1-203ENST00000452013 TMEM150BA6NC51 233 aa9.9□□□□□ -0.82
COL8A1-203ENST00000452013 VWA3AA6NCI4 1184 aa9.9□□□□□ -0.82
COL8A1-203ENST00000452013 ZBTB39O15060 712 aa9.9□□□□□ -0.82
COL8A1-203ENST00000452013 GPR182O15218 404 aa9.9□□□□□ -0.82
COL8A1-203ENST00000452013 SLC26A4O43511 780 aa9.9□□□□□ -0.82
COL8A1-203ENST00000452013 MED24O75448 989 aa9.9□□□□□ -0.82
COL8A1-203ENST00000452013 RPS6KA5O75582 802 aa9.9□□□□□ -0.82
COL8A1-203ENST00000452013 DGAT1O75907 488 aa9.9□□□□□ -0.82
COL8A1-203ENST00000452013 GHRP10912 638 aa9.9□□□□□ -0.82
COL8A1-203ENST00000452013 LONP1P36776 959 aaKnown RBP9.9□□□□□ -0.82
COL8A1-203ENST00000452013 CLCN3P51790 818 aa9.9□□□□□ -0.82
COL8A1-203ENST00000452013 LPIN1Q14693 890 aa9.9□□□□□ -0.82
COL8A1-203ENST00000452013 NFKBIBQ15653 356 aa9.9□□□□□ -0.82
COL8A1-203ENST00000452013 IL17AQ16552 155 aa9.9□□□□□ -0.82
COL8A1-203ENST00000452013 PLA2G4FQ68DD2 849 aa9.9□□□□□ -0.82
COL8A1-203ENST00000452013 ATL3Q6DD88 541 aa9.9□□□□□ -0.82
COL8A1-203ENST00000452013 TSHZ1Q6ZSZ6 1077 aa9.9□□□□□ -0.82
COL8A1-203ENST00000452013 LINC01465Q8N7H1 131 aa9.9□□□□□ -0.82
COL8A1-203ENST00000452013 SNX29Q8TEQ0 813 aa9.9□□□□□ -0.82
COL8A1-203ENST00000452013 PIGOQ8TEQ8 1089 aa9.9□□□□□ -0.82
COL8A1-203ENST00000452013 SCLT1Q96NL6 688 aa9.9□□□□□ -0.82
COL8A1-203ENST00000452013 SLC9A7Q96T83 725 aa9.9□□□□□ -0.82
COL8A1-203ENST00000452013 SH2D3AQ9BRG2 576 aa9.9□□□□□ -0.82
COL8A1-203ENST00000452013 FTHL17Q9BXU8 183 aa9.9□□□□□ -0.82
COL8A1-203ENST00000452013 IFIH1Q9BYX4 1025 aaKnown RBP9.9□□□□□ -0.82
COL8A1-203ENST00000452013 INO80BQ9C086 356 aaPredicted RBP9.9□□□□□ -0.82
COL8A1-203ENST00000452013 DHX33Q9H6R0 707 aaKnown RBP9.9□□□□□ -0.82
COL8A1-203ENST00000452013 MSRAQ9UJ68 235 aa9.9□□□□□ -0.82
COL8A1-203ENST00000452013 KIAA1024Q9UPX6 916 aa9.9□□□□□ -0.82
COL8A1-203ENST00000452013 CLIC4Q9Y696 253 aa9.9□□□□□ -0.82
COL8A1-203ENST00000452013 ARHGEF35A5YM69 484 aa9.89□□□□□ -0.83
COL8A1-203ENST00000452013 GPR32O75388 356 aa9.89□□□□□ -0.83
COL8A1-203ENST00000452013 AMHP03971 560 aa9.89□□□□□ -0.83
COL8A1-203ENST00000452013 VTNP04004 478 aa9.89□□□□□ -0.83
COL8A1-203ENST00000452013 ATP2A2P16615 1042 aaKnown RBP9.89□□□□□ -0.83
COL8A1-203ENST00000452013 UBA7P41226 1012 aa9.89□□□□□ -0.83
COL8A1-203ENST00000452013 RARRES1P49788 294 aa9.89□□□□□ -0.83
COL8A1-203ENST00000452013 NFX1Q12986 1120 aaKnown RBP9.89□□□□□ -0.83
COL8A1-203ENST00000452013 PAK2Q13177 524 aa9.89□□□□□ -0.83
COL8A1-203ENST00000452013 RAB30Q15771 203 aa9.89□□□□□ -0.83
COL8A1-203ENST00000452013 KIZQ2M2Z5 673 aa9.89□□□□□ -0.83
COL8A1-203ENST00000452013 GPR153Q6NV75 609 aa9.89□□□□□ -0.83
COL8A1-203ENST00000452013 FAM173BQ6P4H8 233 aa9.89□□□□□ -0.83
COL8A1-203ENST00000452013 ZNF410Q86VK4 478 aa9.89□□□□□ -0.83
COL8A1-203ENST00000452013 RHPN2Q8IUC4 686 aa9.89□□□□□ -0.83
COL8A1-203ENST00000452013 ZNF579Q8NAF0 562 aaKnown RBP9.89□□□□□ -0.83
COL8A1-203ENST00000452013 NLRP7Q8WX94 980 aa9.89□□□□□ -0.83
COL8A1-203ENST00000452013 PSPC1Q8WXF1 523 aaKnown RBP9.89□□□□□ -0.83
COL8A1-203ENST00000452013 CALML4Q96GE6 196 aa9.89□□□□□ -0.83
COL8A1-203ENST00000452013 CDK5RAP3Q96JB5 506 aa9.89□□□□□ -0.83
COL8A1-203ENST00000452013 MTRQ99707 1265 aa9.89□□□□□ -0.83
COL8A1-203ENST00000452013 ZBED2Q9BTP6 218 aa9.89□□□□□ -0.83
COL8A1-203ENST00000452013 GCOM2Q9BZD3 368 aaPredicted RBP9.89□□□□□ -0.83
COL8A1-203ENST00000452013 NT5C3AQ9H0P0 336 aa9.89□□□□□ -0.83
COL8A1-203ENST00000452013 ADAMTS10Q9H324 1103 aa9.89□□□□□ -0.83
COL8A1-203ENST00000452013 CDHR5Q9HBB8 845 aa9.89□□□□□ -0.83
COL8A1-203ENST00000452013 RNF216Q9NWF9 866 aaPredicted RBP9.89□□□□□ -0.83
COL8A1-203ENST00000452013 CXXC1Q9P0U4 656 aaPredicted RBP9.89□□□□□ -0.83
COL8A1-203ENST00000452013 PADI3Q9ULW8 664 aa9.89□□□□□ -0.83
COL8A1-203ENST00000452013 SCN10AQ9Y5Y9 1956 aa9.88□□□□□ -0.83
COL8A1-203ENST00000452013 A0A087WWV3 80 aa9.88□□□□□ -0.83
COL8A1-203ENST00000452013 ENPP3O14638 875 aa9.88□□□□□ -0.83
COL8A1-203ENST00000452013 F13A1P00488 732 aa9.88□□□□□ -0.83
COL8A1-203ENST00000452013 EIF4BP23588 611 aaKnown RBP9.88□□□□□ -0.83
COL8A1-203ENST00000452013 CDC25AP30304 524 aa9.88□□□□□ -0.83
COL8A1-203ENST00000452013 CD52P31358 61 aa9.88□□□□□ -0.83
COL8A1-203ENST00000452013 GPC3P51654 580 aa9.88□□□□□ -0.83
COL8A1-203ENST00000452013 WDR5P61964 334 aaKnown RBP9.88□□□□□ -0.83
COL8A1-203ENST00000452013 CEBPZQ03701 1054 aaKnown RBP9.88□□□□□ -0.83
COL8A1-203ENST00000452013 MKRN4PQ13434 485 aaPredicted RBP9.88□□□□□ -0.83
COL8A1-203ENST00000452013 TFDP1Q14186 410 aa9.88□□□□□ -0.83
COL8A1-203ENST00000452013 MXD4Q14582 209 aaPredicted RBP9.88□□□□□ -0.83
COL8A1-203ENST00000452013 GSE1Q14687 1217 aa9.88□□□□□ -0.83
COL8A1-203ENST00000452013 EMC2Q15006 297 aa9.88□□□□□ -0.83
COL8A1-203ENST00000452013 SLC39A14Q15043 492 aa9.88□□□□□ -0.83
COL8A1-203ENST00000452013 STK38Q15208 465 aa9.88□□□□□ -0.83
COL8A1-203ENST00000452013 PTPAQ15257 358 aa9.88□□□□□ -0.83
COL8A1-203ENST00000452013 ZRSR1Q15695 479 aaKnown RBP9.88□□□□□ -0.83
COL8A1-203ENST00000452013 FOXD4L5Q5VV16 416 aaPredicted RBP9.88□□□□□ -0.83
COL8A1-203ENST00000452013 CABP7Q86V35 215 aa9.88□□□□□ -0.83
COL8A1-203ENST00000452013 MCPH1Q8NEM0 835 aa9.88□□□□□ -0.83
COL8A1-203ENST00000452013 PRPF31Q8WWY3 499 aaKnown RBP9.88□□□□□ -0.83
COL8A1-203ENST00000452013 FOXD4L4Q8WXT5 416 aaPredicted RBP9.88□□□□□ -0.83
COL8A1-203ENST00000452013 TMEM143Q96AN5 459 aa9.88□□□□□ -0.83
COL8A1-203ENST00000452013 USP28Q96RU2 1077 aa9.88□□□□□ -0.83
COL8A1-203ENST00000452013 OSMRQ99650 979 aa9.88□□□□□ -0.83
COL8A1-203ENST00000452013 AGO3Q9H9G7 860 aaKnown RBP9.88□□□□□ -0.83
COL8A1-203ENST00000452013 ATP6V0A4Q9HBG4 840 aa9.88□□□□□ -0.83
COL8A1-203ENST00000452013 DDX19AQ9NUU7 478 aaKnown RBP9.88□□□□□ -0.83
COL8A1-203ENST00000452013 TFIP11Q9UBB9 837 aaKnown RBP9.88□□□□□ -0.83
COL8A1-203ENST00000452013 CFAP45Q9UL16 551 aa9.88□□□□□ -0.83
COL8A1-203ENST00000452013 ST3GAL5Q9UNP4 418 aa9.88□□□□□ -0.83
COL8A1-203ENST00000452013 NOC2LQ9Y3T9 749 aaKnown RBP9.88□□□□□ -0.83
COL8A1-203ENST00000452013 SRPRBQ9Y5M8 271 aaKnown RBP9.88□□□□□ -0.83
COL8A1-203ENST00000452013 MORC2Q9Y6X9 1032 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms