RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 MBOAT7Q96N66 472 aa19.15■□□□□ 0.66
PRPF40A-204ENST00000450303 THEGQ9P2T0 379 aa19.15■□□□□ 0.66
PRPF40A-204ENST00000450303 DDX25Q9UHL0 483 aaKnown RBP19.15■□□□□ 0.66
PRPF40A-204ENST00000450303 ATP6V1DQ9Y5K8 247 aa19.15■□□□□ 0.66
PRPF40A-204ENST00000450303 NLRC5Q86WI3 1866 aa19.15■□□□□ 0.66
PRPF40A-204ENST00000450303 TTC3P53804 2025 aa19.14■□□□□ 0.65
PRPF40A-204ENST00000450303 BRD1O95696 1058 aa19.14■□□□□ 0.65
PRPF40A-204ENST00000450303 VTNP04004 478 aa19.14■□□□□ 0.65
PRPF40A-204ENST00000450303 OATP04181 439 aa19.14■□□□□ 0.65
PRPF40A-204ENST00000450303 U2AF2P26368 475 aaKnown RBP eCLIP19.14■□□□□ 0.656e-7■■■■□ 26.4
PRPF40A-204ENST00000450303 SFNP31947 248 aa19.14■□□□□ 0.65
PRPF40A-204ENST00000450303 CLCN3P51790 818 aa19.14■□□□□ 0.65
PRPF40A-204ENST00000450303 JAK3P52333 1124 aa19.14■□□□□ 0.65
PRPF40A-204ENST00000450303 PRKCEQ02156 737 aa19.14■□□□□ 0.65
PRPF40A-204ENST00000450303 NFX1Q12986 1120 aaKnown RBP19.14■□□□□ 0.65
PRPF40A-204ENST00000450303 PAK2Q13177 524 aa19.14■□□□□ 0.65
PRPF40A-204ENST00000450303 EARS2Q5JPH6 523 aaKnown RBP19.14■□□□□ 0.65
PRPF40A-204ENST00000450303 ETNPPLQ8TBG4 499 aa19.14■□□□□ 0.65
PRPF40A-204ENST00000450303 NRBP2Q9NSY0 501 aa19.14■□□□□ 0.65
PRPF40A-204ENST00000450303 NOC2LQ9Y3T9 749 aaKnown RBP19.14■□□□□ 0.65
PRPF40A-204ENST00000450303 SQORQ9Y6N5 450 aa19.14■□□□□ 0.65
PRPF40A-204ENST00000450303 FAM205CA6NFA0 338 aa19.13■□□□□ 0.65
PRPF40A-204ENST00000450303 F13A1P00488 732 aa19.13■□□□□ 0.65
PRPF40A-204ENST00000450303 KIZQ2M2Z5 673 aa19.13■□□□□ 0.65
PRPF40A-204ENST00000450303 EPC2Q52LR7 807 aa19.13■□□□□ 0.65
PRPF40A-204ENST00000450303 EFCAB12Q6NXP0 572 aa19.13■□□□□ 0.65
PRPF40A-204ENST00000450303 MOXD1Q6UVY6 613 aa19.13■□□□□ 0.65
PRPF40A-204ENST00000450303 NEK8Q86SG6 692 aa19.13■□□□□ 0.65
PRPF40A-204ENST00000450303 NOSTRINQ8IVI9 506 aa19.13■□□□□ 0.65
PRPF40A-204ENST00000450303 LRRC71Q8N4P6 559 aa19.13■□□□□ 0.65
PRPF40A-204ENST00000450303 TMEM40Q8WWA1 233 aa19.13■□□□□ 0.65
PRPF40A-204ENST00000450303 FAM167AQ96KS9 214 aa19.13■□□□□ 0.65
PRPF40A-204ENST00000450303 TSPYL2Q9H2G4 693 aaPredicted RBP19.13■□□□□ 0.65
PRPF40A-204ENST00000450303 TMX1Q9H3N1 280 aa19.13■□□□□ 0.65
PRPF40A-204ENST00000450303 NOL7Q9UMY1 257 aaKnown RBP19.13■□□□□ 0.65
PRPF40A-204ENST00000450303 KDM3AQ9Y4C1 1321 aa19.13■□□□□ 0.65
PRPF40A-204ENST00000450303 TMEM150BA6NC51 233 aa19.12■□□□□ 0.65
PRPF40A-204ENST00000450303 CCNT1O60563 726 aaKnown RBP19.12■□□□□ 0.65
PRPF40A-204ENST00000450303 RPS6KA5O75582 802 aa19.12■□□□□ 0.65
PRPF40A-204ENST00000450303 TFF2Q03403 129 aa19.12■□□□□ 0.65
PRPF40A-204ENST00000450303 NR5A1Q13285 461 aa19.12■□□□□ 0.65
PRPF40A-204ENST00000450303 TJAP1Q5JTD0 557 aa19.12■□□□□ 0.65
PRPF40A-204ENST00000450303 FOXD4L5Q5VV16 416 aaPredicted RBP19.12■□□□□ 0.65
PRPF40A-204ENST00000450303 B3GNT9Q6UX72 402 aa19.12■□□□□ 0.65
PRPF40A-204ENST00000450303 FERMT3Q86UX7 667 aa19.12■□□□□ 0.65
PRPF40A-204ENST00000450303 TMEM192Q8IY95 271 aa19.12■□□□□ 0.65
PRPF40A-204ENST00000450303 FIBCD1Q8N539 461 aa19.12■□□□□ 0.65
PRPF40A-204ENST00000450303 ATXN2LQ8WWM7 1075 aaKnown RBP19.12■□□□□ 0.65
PRPF40A-204ENST00000450303 FOXD4L4Q8WXT5 416 aaPredicted RBP19.12■□□□□ 0.65
PRPF40A-204ENST00000450303 ZNF668Q96K58 619 aaPredicted RBP19.12■□□□□ 0.65
PRPF40A-204ENST00000450303 OSMRQ99650 979 aa19.12■□□□□ 0.65
PRPF40A-204ENST00000450303 SH2D3AQ9BRG2 576 aa19.12■□□□□ 0.65
PRPF40A-204ENST00000450303 CEP131Q9UPN4 1083 aa19.12■□□□□ 0.65
PRPF40A-204ENST00000450303 CUL9Q8IWT3 2517 aa19.12■□□□□ 0.65
PRPF40A-204ENST00000450303 REV3LO60673 3130 aa19.11■□□□□ 0.65
PRPF40A-204ENST00000450303 MAGEB2O15479 319 aa19.11■□□□□ 0.65
PRPF40A-204ENST00000450303 MGEA5O60502 916 aa19.11■□□□□ 0.65
PRPF40A-204ENST00000450303 MRPS5P82675 430 aaKnown RBP19.11■□□□□ 0.65
PRPF40A-204ENST00000450303 PKP1Q13835 747 aa19.11■□□□□ 0.65
PRPF40A-204ENST00000450303 BANK1Q8NDB2 785 aa19.11■□□□□ 0.65
PRPF40A-204ENST00000450303 ASB2Q96Q27 587 aa19.11■□□□□ 0.65
PRPF40A-204ENST00000450303 FTHL17Q9BXU8 183 aa19.11■□□□□ 0.65
PRPF40A-204ENST00000450303 ERVK-5Q9HDB9 667 aa19.11■□□□□ 0.65
PRPF40A-204ENST00000450303 AKT3Q9Y243 479 aa19.11■□□□□ 0.65
PRPF40A-204ENST00000450303 TCF20Q9UGU0 1960 aaKnown RBP19.11■□□□□ 0.65
PRPF40A-204ENST00000450303 MYH15Q9Y2K3 1946 aa19.1■□□□□ 0.65
PRPF40A-204ENST00000450303 EML1O00423 815 aa19.1■□□□□ 0.65
PRPF40A-204ENST00000450303 GPR32O75388 356 aa19.1■□□□□ 0.65
PRPF40A-204ENST00000450303 CRYBB1P53674 252 aaPredicted RBP19.1■□□□□ 0.65
PRPF40A-204ENST00000450303 RESTQ13127 1097 aa19.1■□□□□ 0.65
PRPF40A-204ENST00000450303 GPM6BQ13491 265 aa19.1■□□□□ 0.65
PRPF40A-204ENST00000450303 MTERF2Q49AM1 385 aa19.1■□□□□ 0.65
PRPF40A-204ENST00000450303 RDM1Q8NG50 284 aa19.1■□□□□ 0.65
PRPF40A-204ENST00000450303 TNFRSF25Q93038 417 aa19.1■□□□□ 0.65
PRPF40A-204ENST00000450303 SAMD11Q96NU1 681 aa19.1■□□□□ 0.65
PRPF40A-204ENST00000450303 NAP1L4Q99733 375 aaKnown RBP19.1■□□□□ 0.65
PRPF40A-204ENST00000450303 LMCD1Q9NZU5 365 aa19.1■□□□□ 0.65
PRPF40A-204ENST00000450303 SEPT9Q9UHD8 586 aaPredicted RBP19.1■□□□□ 0.65
PRPF40A-204ENST00000450303 ST3GAL5Q9UNP4 418 aa19.1■□□□□ 0.65
PRPF40A-204ENST00000450303 RALGAPA2Q2PPJ7 1873 aa19.09■□□□□ 0.65
PRPF40A-204ENST00000450303 ADGRA3Q8IWK6 1321 aa19.09■□□□□ 0.65
PRPF40A-204ENST00000450303 DDX11L8A8MPP1 907 aa19.09■□□□□ 0.65
PRPF40A-204ENST00000450303 MARCH6O60337 910 aa19.09■□□□□ 0.65
PRPF40A-204ENST00000450303 DGKIO75912 1065 aa19.09■□□□□ 0.65
PRPF40A-204ENST00000450303 STBD1O95210 358 aa19.09■□□□□ 0.65
PRPF40A-204ENST00000450303 CTNNB1P35222 781 aa19.09■□□□□ 0.65
PRPF40A-204ENST00000450303 GATMP50440 423 aa19.09■□□□□ 0.65
PRPF40A-204ENST00000450303 NLRP11P59045 1033 aaKnown RBP19.09■□□□□ 0.65
PRPF40A-204ENST00000450303 BTG3Q14201 252 aaPredicted RBP19.09■□□□□ 0.65
PRPF40A-204ENST00000450303 PAN2Q504Q3 1202 aaKnown RBP19.09■□□□□ 0.65
PRPF40A-204ENST00000450303 RILPL1Q5EBL4 403 aa19.09■□□□□ 0.65
PRPF40A-204ENST00000450303 PPP4R3AQ6IN85 833 aa19.09■□□□□ 0.65
PRPF40A-204ENST00000450303 FAM228AQ86W67 206 aa19.09■□□□□ 0.65
PRPF40A-204ENST00000450303 POTEDQ86YR6 584 aa19.09■□□□□ 0.65
PRPF40A-204ENST00000450303 LINC01465Q8N7H1 131 aa19.09■□□□□ 0.65
PRPF40A-204ENST00000450303 SYMPKQ92797 1274 aaKnown RBP19.09■□□□□ 0.65
PRPF40A-204ENST00000450303 ZNF689Q96CS4 500 aaPredicted RBP19.09■□□□□ 0.65
PRPF40A-204ENST00000450303 ZNF396Q96N95 335 aaPredicted RBP19.09■□□□□ 0.65
PRPF40A-204ENST00000450303 RC3H2Q9HBD1 1191 aaKnown RBP19.09■□□□□ 0.65
PRPF40A-204ENST00000450303 KCNMB3Q9NPA1 279 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms