RNA–Protein interactions for RNA: ENST00000450056.6

CHFR-205, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 3,250 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-205ENST00000450056 C3orf20Q8ND61 904 aa15.21■□□□□ 0.02
CHFR-205ENST00000450056 PNMA5Q96PV4 448 aa15.21■□□□□ 0.02
CHFR-205ENST00000450056 ERVK-5Q9HDB9 667 aa15.21■□□□□ 0.02
CHFR-205ENST00000450056 EMILIN3Q9NT22 766 aa15.21■□□□□ 0.02
CHFR-205ENST00000450056 USP15Q9Y4E8 981 aaPredicted RBP15.21■□□□□ 0.02
CHFR-205ENST00000450056 PHLPP1O60346 1717 aa15.2■□□□□ 0.02
CHFR-205ENST00000450056 GSTTP1A0A1W2PQM5 241 aa15.2■□□□□ 0.02
CHFR-205ENST00000450056 LAD1O00515 517 aa15.2■□□□□ 0.02
CHFR-205ENST00000450056 KLRK1P26718 216 aa15.2■□□□□ 0.02
CHFR-205ENST00000450056 ACTRT1Q8TDG2 376 aa15.2■□□□□ 0.02
CHFR-205ENST00000450056 TGFBRAP1Q8WUH2 860 aa15.2■□□□□ 0.02
CHFR-205ENST00000450056 RAD54LQ92698 747 aa15.2■□□□□ 0.02
CHFR-205ENST00000450056 ARHGEF2Q92974 986 aaKnown RBP15.2■□□□□ 0.02
CHFR-205ENST00000450056 BRIP1Q9BX63 1249 aa15.2■□□□□ 0.02
CHFR-205ENST00000450056 RIC8AQ9NPQ8 531 aa15.2■□□□□ 0.02
CHFR-205ENST00000450056 RASAL2Q9UJF2 1139 aa15.2■□□□□ 0.02
CHFR-205ENST00000450056 PPP1R9AQ9ULJ8 1098 aa15.2■□□□□ 0.02
CHFR-205ENST00000450056 NRAPQ86VF7 1730 aa15.2■□□□□ 0.02
CHFR-205ENST00000450056 CCDC6Q16204 474 aa15.2■□□□□ 0.02
CHFR-205ENST00000450056 BARGINQ6ZT62 677 aa15.2■□□□□ 0.02
CHFR-205ENST00000450056 TAOK1Q7L7X3 1001 aa15.2■□□□□ 0.02
CHFR-205ENST00000450056 CCDC65Q8IXS2 484 aa15.2■□□□□ 0.02
CHFR-205ENST00000450056 TMEM237Q96Q45 408 aa15.2■□□□□ 0.02
CHFR-205ENST00000450056 IL17RBQ9NRM6 502 aa15.2■□□□□ 0.02
CHFR-205ENST00000450056 HOMER3Q9NSC5 361 aa15.2■□□□□ 0.02
CHFR-205ENST00000450056 KLHL14Q9P2G3 628 aa15.2■□□□□ 0.02
CHFR-205ENST00000450056 ECM29Q5VYK3 1845 aa15.2■□□□□ 0.02
CHFR-205ENST00000450056 XRCC5P13010 732 aaKnown RBP15.19■□□□□ 0.02
CHFR-205ENST00000450056 COPS2P61201 443 aa15.19■□□□□ 0.02
CHFR-205ENST00000450056 EMC10Q5UCC4 262 aa15.19■□□□□ 0.02
CHFR-205ENST00000450056 CAPN12Q6ZSI9 719 aa15.19■□□□□ 0.02
CHFR-205ENST00000450056 CCHCR1Q8TD31 782 aa15.19■□□□□ 0.02
CHFR-205ENST00000450056 MAGEC3Q8TD91 643 aa15.19■□□□□ 0.02
CHFR-205ENST00000450056 ZNF317Q96PQ6 595 aaPredicted RBP15.19■□□□□ 0.02
CHFR-205ENST00000450056 TMEM47Q9BQJ4 181 aa15.19■□□□□ 0.02
CHFR-205ENST00000450056 ERP44Q9BS26 406 aa15.19■□□□□ 0.02
CHFR-205ENST00000450056 PABPC3Q9H361 631 aaKnown RBP15.19■□□□□ 0.02
CHFR-205ENST00000450056 SLITRK6Q9H5Y7 841 aa15.19■□□□□ 0.02
CHFR-205ENST00000450056 BTG4Q9NY30 223 aa15.19■□□□□ 0.02
CHFR-205ENST00000450056 MAD2L2Q9UI95 211 aa15.19■□□□□ 0.02
CHFR-205ENST00000450056 BCL9LQ86UU0 1499 aa15.19■□□□□ 0.02
CHFR-205ENST00000450056 TMEM120BA0PK00 339 aa15.19■□□□□ 0.02
CHFR-205ENST00000450056 TRMT1LQ7Z2T5 733 aaKnown RBP15.19■□□□□ 0.02
CHFR-205ENST00000450056 JAMLQ86YT9 394 aa15.19■□□□□ 0.02
CHFR-205ENST00000450056 CTTNBP2NLQ9P2B4 639 aa15.19■□□□□ 0.02
CHFR-205ENST00000450056 CTNNAL1Q9UBT7 734 aa15.19■□□□□ 0.02
CHFR-205ENST00000450056 MYH7BA7E2Y1 1941 aa15.19■□□□□ 0.02
CHFR-205ENST00000450056 NUP188Q5SRE5 1749 aa15.19■□□□□ 0.02
CHFR-205ENST00000450056 PVALEFA0A1B0GWK0 134 aa15.19■□□□□ 0.02
CHFR-205ENST00000450056 LRRD1A4D1F6 860 aa15.19■□□□□ 0.02
CHFR-205ENST00000450056 CCND1P24385 295 aa15.19■□□□□ 0.02
CHFR-205ENST00000450056 KIAA1755Q5JYT7 1200 aa15.19■□□□□ 0.02
CHFR-205ENST00000450056 SYCE1Q8N0S2 351 aa15.19■□□□□ 0.02
CHFR-205ENST00000450056 SLC35G2Q8TBE7 412 aa15.19■□□□□ 0.02
CHFR-205ENST00000450056 TRIM7Q9C029 511 aa15.19■□□□□ 0.02
CHFR-205ENST00000450056 EBF2Q9HAK2 575 aa15.19■□□□□ 0.02
CHFR-205ENST00000450056 GCNT4Q9P109 453 aa15.19■□□□□ 0.02
CHFR-205ENST00000450056 SPEF2Q9C093 1822 aa15.19■□□□□ 0.02
CHFR-205ENST00000450056 A0A1W2PRG0 241 aa15.18■□□□□ 0.02
CHFR-205ENST00000450056 SFI1A8K8P3 1242 aa15.18■□□□□ 0.02
CHFR-205ENST00000450056 RARAP10276 462 aa15.18■□□□□ 0.02
CHFR-205ENST00000450056 GNAT1P11488 350 aa15.18■□□□□ 0.02
CHFR-205ENST00000450056 MESDQ14696 234 aa15.18■□□□□ 0.02
CHFR-205ENST00000450056 DIXDC1Q155Q3 683 aa15.18■□□□□ 0.02
CHFR-205ENST00000450056 C6orf118Q5T5N4 469 aa15.18■□□□□ 0.02
CHFR-205ENST00000450056 MIS18BP1Q6P0N0 1132 aa15.18■□□□□ 0.02
CHFR-205ENST00000450056 ITGB4P16144 1822 aa15.18■□□□□ 0.02
CHFR-205ENST00000450056 POTEB3A0JP26 581 aa15.18■□□□□ 0.02
CHFR-205ENST00000450056 POTECB2RU33 542 aa15.18■□□□□ 0.02
CHFR-205ENST00000450056 SNX3O60493 162 aa15.18■□□□□ 0.02
CHFR-205ENST00000450056 NEFHP12036 1026 aa15.18■□□□□ 0.02
CHFR-205ENST00000450056 PRPHP41219 470 aa15.18■□□□□ 0.02
CHFR-205ENST00000450056 PLS1Q14651 629 aa15.18■□□□□ 0.02
CHFR-205ENST00000450056 SLC35G1Q2M3R5 365 aa15.18■□□□□ 0.02
CHFR-205ENST00000450056 POTEBQ6S5H4 581 aa15.18■□□□□ 0.02
CHFR-205ENST00000450056 NAF1Q96HR8 494 aaKnown RBP15.18■□□□□ 0.02
CHFR-205ENST00000450056 ASIC3Q9UHC3 531 aa15.18■□□□□ 0.02
CHFR-205ENST00000450056 KIF3CO14782 793 aa15.18■□□□□ 0.02
CHFR-205ENST00000450056 CLSTN1O94985 981 aa15.18■□□□□ 0.02
CHFR-205ENST00000450056 GH1P01241 217 aa15.18■□□□□ 0.02
CHFR-205ENST00000450056 STAT1P42224 750 aa15.18■□□□□ 0.02
CHFR-205ENST00000450056 CALCOCO2Q13137 446 aa15.18■□□□□ 0.02
CHFR-205ENST00000450056 PABPC4Q13310 644 aaKnown RBP eCLIP15.18■□□□□ 0.02
CHFR-205ENST00000450056 ECM1Q16610 540 aa15.18■□□□□ 0.02
CHFR-205ENST00000450056 SLC30A9Q6PML9 568 aa15.18■□□□□ 0.02
CHFR-205ENST00000450056 LMNTD2Q8IXW0 634 aa15.18■□□□□ 0.02
CHFR-205ENST00000450056 SRRM1Q8IYB3 904 aaKnown RBP15.18■□□□□ 0.02
CHFR-205ENST00000450056 ATXN2LQ8WWM7 1075 aaKnown RBP15.18■□□□□ 0.02
CHFR-205ENST00000450056 TMEM59LQ9UK28 342 aa15.18■□□□□ 0.02
CHFR-205ENST00000450056 PCDHA12Q9UN75 941 aa15.18■□□□□ 0.02
CHFR-205ENST00000450056 SLC12A4Q9UP95 1085 aa15.18■□□□□ 0.02
CHFR-205ENST00000450056 SRRM3A6NNA2 597 aaPredicted RBP15.17■□□□□ 0.02
CHFR-205ENST00000450056 ASAP2O43150 1006 aa15.17■□□□□ 0.02
CHFR-205ENST00000450056 TARSP26639 723 aaKnown RBP15.17■□□□□ 0.02
CHFR-205ENST00000450056 GRIK3Q13003 919 aa15.17■□□□□ 0.02
CHFR-205ENST00000450056 ITIH4Q14624 930 aa15.17■□□□□ 0.02
CHFR-205ENST00000450056 ZNF746Q6NUN9 644 aaPredicted RBP15.17■□□□□ 0.02
CHFR-205ENST00000450056 SPATA21Q7Z572 469 aa15.17■□□□□ 0.02
CHFR-205ENST00000450056 C1orf131Q8NDD1 294 aaKnown RBP15.17■□□□□ 0.02
CHFR-205ENST00000450056 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms