RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 TMEM40Q8WWA1 233 aa19.54■□□□□ 0.72
CLTCL1-203ENST00000449918 PPP1R16BQ96T49 567 aa19.54■□□□□ 0.72
CLTCL1-203ENST00000449918 OSMRQ99650 979 aa19.54■□□□□ 0.72
CLTCL1-203ENST00000449918 BRMS1Q9HCU9 246 aa19.54■□□□□ 0.72
CLTCL1-203ENST00000449918 PCDHB7Q9Y5E2 793 aa19.54■□□□□ 0.72
CLTCL1-203ENST00000449918 SIP14410 1827 aa19.53■□□□□ 0.72
CLTCL1-203ENST00000449918 KCNQ1P51787 676 aa19.53■□□□□ 0.72
CLTCL1-203ENST00000449918 CLCN3P51790 818 aa19.53■□□□□ 0.72
CLTCL1-203ENST00000449918 TBC1D8BQ0IIM8 1120 aa19.53■□□□□ 0.72
CLTCL1-203ENST00000449918 XKR3Q5GH77 459 aa19.53■□□□□ 0.72
CLTCL1-203ENST00000449918 B3GNT9Q6UX72 402 aa19.53■□□□□ 0.72
CLTCL1-203ENST00000449918 PIK3AP1Q6ZUJ8 805 aa19.53■□□□□ 0.72
CLTCL1-203ENST00000449918 SLC24A5Q71RS6 500 aa19.53■□□□□ 0.72
CLTCL1-203ENST00000449918 BANK1Q8NDB2 785 aa19.53■□□□□ 0.72
CLTCL1-203ENST00000449918 GTF3C6Q969F1 213 aa19.53■□□□□ 0.72
CLTCL1-203ENST00000449918 ADAM2Q99965 735 aa19.53■□□□□ 0.72
CLTCL1-203ENST00000449918 PLVAPQ9BX97 442 aa19.53■□□□□ 0.72
CLTCL1-203ENST00000449918 NIFKQ9BYG3 293 aaKnown RBP19.53■□□□□ 0.72
CLTCL1-203ENST00000449918 RGS18Q9NS28 235 aa19.53■□□□□ 0.72
CLTCL1-203ENST00000449918 TTC3P53804 2025 aa19.52■□□□□ 0.72
CLTCL1-203ENST00000449918 COL4A4P53420 1690 aaPredicted RBP19.52■□□□□ 0.72
CLTCL1-203ENST00000449918 SLC37A4O43826 429 aa19.52■□□□□ 0.72
CLTCL1-203ENST00000449918 MARCH6O60337 910 aa19.52■□□□□ 0.72
CLTCL1-203ENST00000449918 CCNT1O60563 726 aaKnown RBP19.52■□□□□ 0.72
CLTCL1-203ENST00000449918 KRT2P35908 639 aa19.52■□□□□ 0.72
CLTCL1-203ENST00000449918 NLRP11P59045 1033 aaKnown RBP19.52■□□□□ 0.72
CLTCL1-203ENST00000449918 CDC42EP1Q00587 391 aa19.52■□□□□ 0.72
CLTCL1-203ENST00000449918 TARBP2Q15633 366 aaKnown RBP19.52■□□□□ 0.72
CLTCL1-203ENST00000449918 LRRC71Q8N4P6 559 aa19.52■□□□□ 0.72
CLTCL1-203ENST00000449918 LINC01465Q8N7H1 131 aa19.52■□□□□ 0.72
CLTCL1-203ENST00000449918 LMAN2LQ9H0V9 348 aa19.52■□□□□ 0.72
CLTCL1-203ENST00000449918 GJB4Q9NTQ9 266 aa19.52■□□□□ 0.72
CLTCL1-203ENST00000449918 SEPT9Q9UHD8 586 aaPredicted RBP19.52■□□□□ 0.72
CLTCL1-203ENST00000449918 TBX3O15119 743 aa19.51■□□□□ 0.71
CLTCL1-203ENST00000449918 DKC1O60832 514 aaKnown RBP eCLIP19.51■□□□□ 0.71
CLTCL1-203ENST00000449918 LINC00271P0C7V0 271 aa19.51■□□□□ 0.71
CLTCL1-203ENST00000449918 FDPSP14324 419 aaKnown RBP19.51■□□□□ 0.71
CLTCL1-203ENST00000449918 EIF4BP23588 611 aaKnown RBP19.51■□□□□ 0.71
CLTCL1-203ENST00000449918 DNM2P50570 870 aa19.51■□□□□ 0.71
CLTCL1-203ENST00000449918 PSMC5P62195 406 aa19.51■□□□□ 0.71
CLTCL1-203ENST00000449918 PPP2R5CQ13362 524 aa19.51■□□□□ 0.71
CLTCL1-203ENST00000449918 FAM228AQ86W67 206 aa19.51■□□□□ 0.71
CLTCL1-203ENST00000449918 OXER1Q8TDS5 423 aa19.51■□□□□ 0.71
CLTCL1-203ENST00000449918 ADAMTS10Q9H324 1103 aa19.51■□□□□ 0.71
CLTCL1-203ENST00000449918 NSUN3Q9H649 340 aaKnown RBP19.51■□□□□ 0.71
CLTCL1-203ENST00000449918 KCNMB3Q9NPA1 279 aa19.51■□□□□ 0.71
CLTCL1-203ENST00000449918 MYH9P35579 1960 aaKnown RBP19.51■□□□□ 0.71
CLTCL1-203ENST00000449918 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.5■□□□□ 0.71
CLTCL1-203ENST00000449918 DDX11L8A8MPP1 907 aa19.5■□□□□ 0.71
CLTCL1-203ENST00000449918 MGEA5O60502 916 aa19.5■□□□□ 0.71
CLTCL1-203ENST00000449918 DTNBO60941 627 aa19.5■□□□□ 0.71
CLTCL1-203ENST00000449918 SEC24BO95487 1268 aa19.5■□□□□ 0.71
CLTCL1-203ENST00000449918 IBSPP21815 317 aaPredicted RBP19.5■□□□□ 0.71
CLTCL1-203ENST00000449918 TRIM29Q14134 588 aa19.5■□□□□ 0.71
CLTCL1-203ENST00000449918 MTERF2Q49AM1 385 aa19.5■□□□□ 0.71
CLTCL1-203ENST00000449918 PAN2Q504Q3 1202 aaKnown RBP19.5■□□□□ 0.71
CLTCL1-203ENST00000449918 NAALADL2Q58DX5 795 aa19.5■□□□□ 0.71
CLTCL1-203ENST00000449918 SCLT1Q96NL6 688 aa19.5■□□□□ 0.71
CLTCL1-203ENST00000449918 UBE2ZQ9H832 354 aaPredicted RBP19.5■□□□□ 0.71
CLTCL1-203ENST00000449918 MRPL42Q9Y6G3 142 aaKnown RBP19.5■□□□□ 0.71
CLTCL1-203ENST00000449918 C9IYK1 514 aa19.49■□□□□ 0.71
CLTCL1-203ENST00000449918 NCK2O43639 380 aa19.49■□□□□ 0.71
CLTCL1-203ENST00000449918 STBD1O95210 358 aa19.49■□□□□ 0.71
CLTCL1-203ENST00000449918 BAG4O95429 457 aaKnown RBP19.49■□□□□ 0.71
CLTCL1-203ENST00000449918 LARGE1O95461 756 aa19.49■□□□□ 0.71
CLTCL1-203ENST00000449918 ZSCAN20P17040 1043 aaPredicted RBP19.49■□□□□ 0.71
CLTCL1-203ENST00000449918 QARSP47897 775 aaKnown RBP19.49■□□□□ 0.71
CLTCL1-203ENST00000449918 GPC3P51654 580 aa19.49■□□□□ 0.71
CLTCL1-203ENST00000449918 FAM189BP81408 668 aa19.49■□□□□ 0.71
CLTCL1-203ENST00000449918 SLFN12Q8IYM2 578 aa19.49■□□□□ 0.71
CLTCL1-203ENST00000449918 NSUN7Q8NE18 718 aaKnown RBP19.49■□□□□ 0.71
CLTCL1-203ENST00000449918 NLRP7Q8WX94 980 aa19.49■□□□□ 0.71
CLTCL1-203ENST00000449918 P2RX5Q93086 422 aa19.49■□□□□ 0.71
CLTCL1-203ENST00000449918 JPH2Q9BR39 696 aaPredicted RBP19.49■□□□□ 0.71
CLTCL1-203ENST00000449918 ATP6V0A4Q9HBG4 840 aa19.49■□□□□ 0.71
CLTCL1-203ENST00000449918 VAV3Q9UKW4 847 aa19.49■□□□□ 0.71
CLTCL1-203ENST00000449918 TTC28Q96AY4 2481 aa19.49■□□□□ 0.71
CLTCL1-203ENST00000449918 EML1O00423 815 aa19.48■□□□□ 0.71
CLTCL1-203ENST00000449918 GRM6O15303 877 aa19.48■□□□□ 0.71
CLTCL1-203ENST00000449918 P4HBP07237 508 aaKnown RBP19.48■□□□□ 0.71
CLTCL1-203ENST00000449918 TCEAL5Q5H9L2 206 aa19.48■□□□□ 0.71
CLTCL1-203ENST00000449918 ELAC1Q9H777 363 aaKnown RBP19.48■□□□□ 0.71
CLTCL1-203ENST00000449918 TMEM161AQ9NX61 479 aa19.48■□□□□ 0.71
CLTCL1-203ENST00000449918 PLAGL2Q9UPG8 496 aa19.48■□□□□ 0.71
CLTCL1-203ENST00000449918 LIMCH1Q9UPQ0 1083 aa19.48■□□□□ 0.71
CLTCL1-203ENST00000449918 MMP1P03956 469 aa19.47■□□□□ 0.71
CLTCL1-203ENST00000449918 DARSP14868 501 aaKnown RBP19.47■□□□□ 0.71
CLTCL1-203ENST00000449918 KCNA5P22460 613 aa19.47■□□□□ 0.71
CLTCL1-203ENST00000449918 NR5A1Q13285 461 aa19.47■□□□□ 0.71
CLTCL1-203ENST00000449918 DSC3Q14574 896 aa19.47■□□□□ 0.71
CLTCL1-203ENST00000449918 LEXMQ3ZCV2 418 aa19.47■□□□□ 0.71
CLTCL1-203ENST00000449918 EXOC8Q8IYI6 725 aa19.47■□□□□ 0.71
CLTCL1-203ENST00000449918 HAS1Q92839 578 aa19.47■□□□□ 0.71
CLTCL1-203ENST00000449918 CEP89Q96ST8 783 aa19.47■□□□□ 0.71
CLTCL1-203ENST00000449918 GCOM2Q9BZD3 368 aaPredicted RBP19.47■□□□□ 0.71
CLTCL1-203ENST00000449918 AAASQ9NRG9 546 aa19.47■□□□□ 0.71
CLTCL1-203ENST00000449918 EVPLQ92817 2033 aa19.47■□□□□ 0.71
CLTCL1-203ENST00000449918 XIRP2A4UGR9 3374 aa19.47■□□□□ 0.71
CLTCL1-203ENST00000449918 SPTBN5Q9NRC6 3674 aaKnown RBP19.46■□□□□ 0.71
CLTCL1-203ENST00000449918 IGKV6-21A0A0C4DH24 114 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms