RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 CNOT8Q9UFF9 292 aaKnown RBP14.62□□□□□ -0.07
SYNGAP1-204ENST00000449372 RHOBTB3O94955 611 aa14.62□□□□□ -0.07
SYNGAP1-204ENST00000449372 PAEPP09466 180 aa14.62□□□□□ -0.07
SYNGAP1-204ENST00000449372 SEPT2Q15019 361 aa14.62□□□□□ -0.07
SYNGAP1-204ENST00000449372 PDXDC2PQ6P474 469 aa14.62□□□□□ -0.07
SYNGAP1-204ENST00000449372 OR2W6PQ8NHA6 318 aa14.62□□□□□ -0.07
SYNGAP1-204ENST00000449372 PCDHA4Q9UN74 947 aa14.62□□□□□ -0.07
SYNGAP1-204ENST00000449372 GNA11P29992 359 aa14.62□□□□□ -0.07
SYNGAP1-204ENST00000449372 PDE4DQ08499 809 aa14.62□□□□□ -0.07
SYNGAP1-204ENST00000449372 WDR59Q6PJI9 974 aa14.62□□□□□ -0.07
SYNGAP1-204ENST00000449372 ZNF444Q8N0Y2 327 aaPredicted RBP14.62□□□□□ -0.07
SYNGAP1-204ENST00000449372 RNF10Q8N5U6 811 aaKnown RBP14.62□□□□□ -0.07
SYNGAP1-204ENST00000449372 EYA3Q99504 573 aa14.62□□□□□ -0.07
SYNGAP1-204ENST00000449372 SYT15Q9BQS2 421 aa14.62□□□□□ -0.07
SYNGAP1-204ENST00000449372 ABCB11O95342 1321 aa14.62□□□□□ -0.07
SYNGAP1-204ENST00000449372 RIMBP2O15034 1052 aa14.61□□□□□ -0.07
SYNGAP1-204ENST00000449372 OATP04181 439 aa14.61□□□□□ -0.07
SYNGAP1-204ENST00000449372 CCNG1P51959 295 aa14.61□□□□□ -0.07
SYNGAP1-204ENST00000449372 CYP27A1Q02318 531 aa14.61□□□□□ -0.07
SYNGAP1-204ENST00000449372 ADAM9Q13443 819 aa14.61□□□□□ -0.07
SYNGAP1-204ENST00000449372 BIRC3Q13489 604 aa14.61□□□□□ -0.07
SYNGAP1-204ENST00000449372 RUFY4Q6ZNE9 571 aa14.61□□□□□ -0.07
SYNGAP1-204ENST00000449372 MXD3Q9BW11 206 aa14.61□□□□□ -0.07
SYNGAP1-204ENST00000449372 SPZ1Q9BXG8 430 aa14.61□□□□□ -0.07
SYNGAP1-204ENST00000449372 AGAP1Q9UPQ3 857 aa14.61□□□□□ -0.07
SYNGAP1-204ENST00000449372 STK38LQ9Y2H1 464 aa14.61□□□□□ -0.07
SYNGAP1-204ENST00000449372 A8MUI8 341 aa14.61□□□□□ -0.07
SYNGAP1-204ENST00000449372 ABLIM1O14639 778 aa14.61□□□□□ -0.07
SYNGAP1-204ENST00000449372 ATP6V1G1O75348 118 aa14.61□□□□□ -0.07
SYNGAP1-204ENST00000449372 VIMP08670 466 aaKnown RBP14.61□□□□□ -0.07
SYNGAP1-204ENST00000449372 MAGEA1P43355 309 aa14.61□□□□□ -0.07
SYNGAP1-204ENST00000449372 ENOX2Q16206 610 aaKnown RBP14.61□□□□□ -0.07
SYNGAP1-204ENST00000449372 ANKRD27Q96NW4 1050 aa14.61□□□□□ -0.07
SYNGAP1-204ENST00000449372 NOVA2Q9UNW9 492 aaKnown RBP14.61□□□□□ -0.07
SYNGAP1-204ENST00000449372 SMARCA1P28370 1054 aa14.6□□□□□ -0.07
SYNGAP1-204ENST00000449372 ATP11AP98196 1134 aa14.6□□□□□ -0.07
SYNGAP1-204ENST00000449372 APOBEC3HQ6NTF7 200 aaKnown RBP14.6□□□□□ -0.07
SYNGAP1-204ENST00000449372 LRIG3Q6UXM1 1119 aa14.6□□□□□ -0.07
SYNGAP1-204ENST00000449372 DNAJC14Q6Y2X3 702 aaPredicted RBP14.6□□□□□ -0.07
SYNGAP1-204ENST00000449372 TRPM8Q7Z2W7 1104 aa14.6□□□□□ -0.07
SYNGAP1-204ENST00000449372 MIPOL1Q8TD10 442 aa14.6□□□□□ -0.07
SYNGAP1-204ENST00000449372 MAIP1Q8WWC4 291 aa14.6□□□□□ -0.07
SYNGAP1-204ENST00000449372 STAMQ92783 540 aa14.6□□□□□ -0.07
SYNGAP1-204ENST00000449372 PURBQ96QR8 312 aaKnown RBP14.6□□□□□ -0.07
SYNGAP1-204ENST00000449372 ERGIC2Q96RQ1 377 aa14.6□□□□□ -0.07
SYNGAP1-204ENST00000449372 PLCB1Q9NQ66 1216 aa14.6□□□□□ -0.07
SYNGAP1-204ENST00000449372 MAGEA10P43363 369 aaPredicted RBP14.6□□□□□ -0.07
SYNGAP1-204ENST00000449372 LBRQ14739 615 aaKnown RBP14.6□□□□□ -0.07
SYNGAP1-204ENST00000449372 MYBPC3Q14896 1274 aa14.6□□□□□ -0.07
SYNGAP1-204ENST00000449372 HHIPL2Q6UWX4 724 aa14.6□□□□□ -0.07
SYNGAP1-204ENST00000449372 C7orf43Q8WVR3 580 aa14.6□□□□□ -0.07
SYNGAP1-204ENST00000449372 CEP95Q96GE4 821 aa14.6□□□□□ -0.07
SYNGAP1-204ENST00000449372 CNOT6LQ96LI5 555 aaKnown RBP14.6□□□□□ -0.07
SYNGAP1-204ENST00000449372 C6orf50Q9HD87 102 aa14.6□□□□□ -0.07
SYNGAP1-204ENST00000449372 BARHL2Q9NY43 387 aa14.6□□□□□ -0.07
SYNGAP1-204ENST00000449372 VWA3BQ502W6 1294 aa14.6□□□□□ -0.07
SYNGAP1-204ENST00000449372 TMEM154Q6P9G4 183 aa14.6□□□□□ -0.07
SYNGAP1-204ENST00000449372 CAPN6Q9Y6Q1 641 aa14.6□□□□□ -0.07
SYNGAP1-204ENST00000449372 MYH4Q9Y623 1939 aa14.6□□□□□ -0.07
SYNGAP1-204ENST00000449372 IGF2BP3O00425 579 aaKnown RBP eCLIP14.6□□□□□ -0.07
SYNGAP1-204ENST00000449372 CASP1P29466 404 aa14.6□□□□□ -0.07
SYNGAP1-204ENST00000449372 CTNNA1P35221 906 aaKnown RBP14.6□□□□□ -0.07
SYNGAP1-204ENST00000449372 RNF220Q5VTB9 566 aa14.6□□□□□ -0.07
SYNGAP1-204ENST00000449372 DPP8Q6V1X1 898 aaPredicted RBP14.6□□□□□ -0.07
SYNGAP1-204ENST00000449372 CABP7Q86V35 215 aa14.6□□□□□ -0.07
SYNGAP1-204ENST00000449372 GIMAP8Q8ND71 665 aaPredicted RBP14.6□□□□□ -0.07
SYNGAP1-204ENST00000449372 CTNND1O60716 968 aaKnown RBP14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 LGR5O75473 907 aa14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 SNHG28P0DPA3 235 aa14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 HSPA9P38646 679 aaKnown RBP14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 EPS15P42566 896 aa14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 FKBP1AP62942 108 aaKnown RBP14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 LACTBP83111 547 aaPredicted RBP14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 ITIH4Q14624 930 aa14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 SV2BQ7L1I2 683 aa14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 DYDC1Q8WWB3 177 aa14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 CASKIN2Q8WXE0 1202 aa14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 GPKOWQ92917 476 aaPredicted RBP eCLIP14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 LRRC45Q96CN5 670 aa14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 MRIQ9BWK5 157 aa14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 ZC3H12CQ9C0D7 883 aaKnown RBP14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 MAF1Q9H063 256 aa14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 MYO3BQ8WXR4 1341 aa14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 MAGOHP61326 146 aaKnown RBP14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 STYK1Q6J9G0 422 aa14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 MAGOHBQ96A72 148 aaKnown RBP14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 KCNQ5Q9NR82 932 aa14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 LRWD1Q9UFC0 647 aa14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 PCDHA6Q9UN73 950 aa14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 PCDHA8Q9Y5H6 950 aa14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 PDLIM1O00151 329 aa14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 HSD17B3P37058 310 aa14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 HLTFQ14527 1009 aaKnown RBP eCLIP14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 MAN2A1Q16706 1144 aa14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 DOK7Q18PE1 504 aa14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 SGSM1Q2NKQ1 1148 aa14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 SLC9C1Q4G0N8 1177 aa14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 TDRD12Q587J7 1177 aaKnown RBP14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 MFSD4BQ5TF39 518 aa14.59□□□□□ -0.07
SYNGAP1-204ENST00000449372 ADAM22Q9P0K1 906 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms