RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 BAG4O95429 457 aaKnown RBP16.38■□□□□ 0.21
USP39-206ENST00000448971 RSPH10BP0C881 870 aa16.38■□□□□ 0.21
USP39-206ENST00000448971 ADAM17P78536 824 aa16.38■□□□□ 0.21
USP39-206ENST00000448971 PRKCEQ02156 737 aa16.38■□□□□ 0.21
USP39-206ENST00000448971 CALCRLQ16602 461 aa16.38■□□□□ 0.21
USP39-206ENST00000448971 PLEKHG4Q58EX7 1191 aa16.38■□□□□ 0.21
USP39-206ENST00000448971 RUFY4Q6ZNE9 571 aa16.38■□□□□ 0.21
USP39-206ENST00000448971 RSPH3Q86UC2 560 aa16.38■□□□□ 0.21
USP39-206ENST00000448971 NOSTRINQ8IVI9 506 aa16.38■□□□□ 0.21
USP39-206ENST00000448971 SLFN12Q8IYM2 578 aa16.38■□□□□ 0.21
USP39-206ENST00000448971 BBXQ8WY36 941 aaPredicted RBP16.38■□□□□ 0.21
USP39-206ENST00000448971 OSBPL7Q9BZF2 842 aa16.38■□□□□ 0.21
USP39-206ENST00000448971 FAM49AQ9H0Q0 323 aaPredicted RBP16.38■□□□□ 0.21
USP39-206ENST00000448971 NOL7Q9UMY1 257 aaKnown RBP16.38■□□□□ 0.21
USP39-206ENST00000448971 MAFBQ9Y5Q3 323 aaPredicted RBP16.38■□□□□ 0.21
USP39-206ENST00000448971 C5orf42Q9H799 3197 aa16.38■□□□□ 0.21
USP39-206ENST00000448971 COL1A2P08123 1366 aa16.38■□□□□ 0.21
USP39-206ENST00000448971 MBLAC1A4D2B0 266 aaPredicted RBP16.37■□□□□ 0.21
USP39-206ENST00000448971 OATP04181 439 aa16.37■□□□□ 0.21
USP39-206ENST00000448971 KCNA5P22460 613 aa16.37■□□□□ 0.21
USP39-206ENST00000448971 MCM7P33993 719 aa16.37■□□□□ 0.21
USP39-206ENST00000448971 UGCGQ16739 394 aa16.37■□□□□ 0.21
USP39-206ENST00000448971 MCTP1Q6DN14 999 aa16.37■□□□□ 0.21
USP39-206ENST00000448971 NCAPH2Q6IBW4 605 aa16.37■□□□□ 0.21
USP39-206ENST00000448971 GJD3Q8N144 294 aa16.37■□□□□ 0.21
USP39-206ENST00000448971 FBXO22Q8NEZ5 403 aa16.37■□□□□ 0.21
USP39-206ENST00000448971 NEK9Q8TD19 979 aa16.37■□□□□ 0.21
USP39-206ENST00000448971 ZBTB10Q96DT7 871 aa16.37■□□□□ 0.21
USP39-206ENST00000448971 MRPL38Q96DV4 380 aaKnown RBP16.37■□□□□ 0.21
USP39-206ENST00000448971 VAV3Q9UKW4 847 aa16.37■□□□□ 0.21
USP39-206ENST00000448971 CEP131Q9UPN4 1083 aa16.37■□□□□ 0.21
USP39-206ENST00000448971 WDFY4Q6ZS81 3184 aa16.36■□□□□ 0.21
USP39-206ENST00000448971 GRXCR2A6NFK2 248 aa16.36■□□□□ 0.21
USP39-206ENST00000448971 M0QZ92 97 aa16.36■□□□□ 0.21
USP39-206ENST00000448971 WNT7AO00755 349 aa16.36■□□□□ 0.21
USP39-206ENST00000448971 AMHP03971 560 aa16.36■□□□□ 0.21
USP39-206ENST00000448971 RPLP2P05387 115 aaKnown RBP16.36■□□□□ 0.21
USP39-206ENST00000448971 IL9P15248 144 aa16.36■□□□□ 0.21
USP39-206ENST00000448971 PPP2R5CQ13362 524 aa16.36■□□□□ 0.21
USP39-206ENST00000448971 EPC2Q52LR7 807 aa16.36■□□□□ 0.21
USP39-206ENST00000448971 ZNF484Q5JVG2 852 aa16.36■□□□□ 0.21
USP39-206ENST00000448971 TTC38Q5R3I4 469 aa16.36■□□□□ 0.21
USP39-206ENST00000448971 MARCH8Q5T0T0 291 aa16.36■□□□□ 0.21
USP39-206ENST00000448971 MYOCDQ8IZQ8 938 aa16.36■□□□□ 0.21
USP39-206ENST00000448971 BANK1Q8NDB2 785 aa16.36■□□□□ 0.21
USP39-206ENST00000448971 DNAJB3Q8WWF6 145 aa16.36■□□□□ 0.21
USP39-206ENST00000448971 HAS1Q92839 578 aa16.36■□□□□ 0.21
USP39-206ENST00000448971 TOP1MTQ969P6 601 aa16.36■□□□□ 0.21
USP39-206ENST00000448971 SEPT9Q9UHD8 586 aaPredicted RBP16.36■□□□□ 0.21
USP39-206ENST00000448971 K7ELQ4 463 aaPredicted RBP16.35■□□□□ 0.21
USP39-206ENST00000448971 ATP4AP20648 1035 aa16.35■□□□□ 0.21
USP39-206ENST00000448971 PTCRAQ6ISU1 281 aaPredicted RBP16.35■□□□□ 0.21
USP39-206ENST00000448971 MTHFD1LQ6UB35 978 aa16.35■□□□□ 0.21
USP39-206ENST00000448971 B3GNT9Q6UX72 402 aa16.35■□□□□ 0.21
USP39-206ENST00000448971 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.34■□□□□ 0.21
USP39-206ENST00000448971 PRR33A8MZF0 331 aa16.34■□□□□ 0.21
USP39-206ENST00000448971 H3BNC9 293 aa16.34■□□□□ 0.21
USP39-206ENST00000448971 EML1O00423 815 aa16.34■□□□□ 0.21
USP39-206ENST00000448971 ZNF862O60290 1169 aa16.34■□□□□ 0.21
USP39-206ENST00000448971 KLRC1P26715 233 aa16.34■□□□□ 0.21
USP39-206ENST00000448971 TXKP42681 527 aa16.34■□□□□ 0.21
USP39-206ENST00000448971 TRAPPC10P48553 1259 aa16.34■□□□□ 0.21
USP39-206ENST00000448971 MRPS6P82932 125 aaKnown RBP16.34■□□□□ 0.21
USP39-206ENST00000448971 CUL4AQ13619 759 aa16.34■□□□□ 0.21
USP39-206ENST00000448971 COL19A1Q14993 1142 aa16.34■□□□□ 0.21
USP39-206ENST00000448971 HSCBQ8IWL3 235 aa16.34■□□□□ 0.21
USP39-206ENST00000448971 NRBP2Q9NSY0 501 aa16.34■□□□□ 0.21
USP39-206ENST00000448971 PCDHA2Q9Y5H9 948 aa16.34■□□□□ 0.21
USP39-206ENST00000448971 SMIM35A0A1B0GVV1 85 aa16.33■□□□□ 0.2
USP39-206ENST00000448971 DKC1O60832 514 aaKnown RBP eCLIP16.33■□□□□ 0.2
USP39-206ENST00000448971 C22orf31O95567 290 aa16.33■□□□□ 0.2
USP39-206ENST00000448971 OR52Z1P0C646 297 aa16.33■□□□□ 0.2
USP39-206ENST00000448971 U2AF2P26368 475 aaKnown RBP eCLIP16.33■□□□□ 0.2
USP39-206ENST00000448971 PSMC5P62195 406 aa16.33■□□□□ 0.2
USP39-206ENST00000448971 TMEM62Q0P6H9 643 aa16.33■□□□□ 0.2
USP39-206ENST00000448971 ORC2Q13416 577 aaPredicted RBP16.33■□□□□ 0.2
USP39-206ENST00000448971 ZNF174Q15697 407 aa16.33■□□□□ 0.2
USP39-206ENST00000448971 MTERF2Q49AM1 385 aa16.33■□□□□ 0.2
USP39-206ENST00000448971 LARP1BQ659C4 914 aaKnown RBP16.33■□□□□ 0.2
USP39-206ENST00000448971 RPAINQ86UA6 219 aa16.33■□□□□ 0.2
USP39-206ENST00000448971 METTL13Q8N6R0 699 aa16.33■□□□□ 0.2
USP39-206ENST00000448971 SAMD11Q96NU1 681 aa16.33■□□□□ 0.2
USP39-206ENST00000448971 LXNQ9BS40 222 aa16.33■□□□□ 0.2
USP39-206ENST00000448971 TTC12Q9H892 705 aaPredicted RBP16.33■□□□□ 0.2
USP39-206ENST00000448971 PCDHA12Q9UN75 941 aa16.33■□□□□ 0.2
USP39-206ENST00000448971 TRPV2Q9Y5S1 764 aa16.33■□□□□ 0.2
USP39-206ENST00000448971 CDY2AQ9Y6F7 541 aa16.33■□□□□ 0.2
USP39-206ENST00000448971 VPS37CA5D8V6 355 aaPredicted RBP16.32■□□□□ 0.2
USP39-206ENST00000448971 ZBTB42B2RXF5 422 aa16.32■□□□□ 0.2
USP39-206ENST00000448971 GHRP10912 638 aa16.32■□□□□ 0.2
USP39-206ENST00000448971 QARSP47897 775 aaKnown RBP16.32■□□□□ 0.2
USP39-206ENST00000448971 NUBP1P53384 320 aa16.32■□□□□ 0.2
USP39-206ENST00000448971 CYP4A11Q02928 519 aa16.32■□□□□ 0.2
USP39-206ENST00000448971 SPIRE1Q08AE8 756 aa16.32■□□□□ 0.2
USP39-206ENST00000448971 MGAT3Q09327 533 aa16.32■□□□□ 0.2
USP39-206ENST00000448971 TBC1D8BQ0IIM8 1120 aa16.32■□□□□ 0.2
USP39-206ENST00000448971 GPM6BQ13491 265 aa16.32■□□□□ 0.2
USP39-206ENST00000448971 NBR1Q14596 966 aa16.32■□□□□ 0.2
USP39-206ENST00000448971 EPHA7Q15375 998 aa16.32■□□□□ 0.2
USP39-206ENST00000448971 PTPROQ16827 1216 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms