RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 NLRP11P59045 1033 aaKnown RBP14.3□□□□□ -0.12
PRPF40A-203ENST00000448428 TBC1D8BQ0IIM8 1120 aa14.3□□□□□ -0.12
PRPF40A-203ENST00000448428 NFX1Q12986 1120 aaKnown RBP14.3□□□□□ -0.12
PRPF40A-203ENST00000448428 PAK2Q13177 524 aa14.3□□□□□ -0.12
PRPF40A-203ENST00000448428 LINC01599Q8WXQ3 324 aa14.3□□□□□ -0.12
PRPF40A-203ENST00000448428 TMEM60Q9H2L4 133 aa14.3□□□□□ -0.12
PRPF40A-203ENST00000448428 TMX1Q9H3N1 280 aa14.3□□□□□ -0.12
PRPF40A-203ENST00000448428 TTC12Q9H892 705 aaPredicted RBP14.3□□□□□ -0.12
PRPF40A-203ENST00000448428 COL6A3P12111 3177 aa14.3□□□□□ -0.12
PRPF40A-203ENST00000448428 LINC01553A4QN01 128 aa14.29□□□□□ -0.12
PRPF40A-203ENST00000448428 ZBTB39O15060 712 aa14.29□□□□□ -0.12
PRPF40A-203ENST00000448428 DKC1O60832 514 aaKnown RBP eCLIP14.29□□□□□ -0.12
PRPF40A-203ENST00000448428 RPS6KA5O75582 802 aa14.29□□□□□ -0.12
PRPF40A-203ENST00000448428 SLITRK3O94933 977 aa14.29□□□□□ -0.12
PRPF40A-203ENST00000448428 IGFBP4P22692 258 aa14.29□□□□□ -0.12
PRPF40A-203ENST00000448428 U2AF2P26368 475 aaKnown RBP eCLIP14.29□□□□□ -0.125e-7■■■■□ 19.7
PRPF40A-203ENST00000448428 NPEPPSP55786 919 aa14.29□□□□□ -0.12
PRPF40A-203ENST00000448428 DRP2Q13474 957 aa14.29□□□□□ -0.12
PRPF40A-203ENST00000448428 GNL2Q13823 731 aaKnown RBP14.29□□□□□ -0.12
PRPF40A-203ENST00000448428 ZNF174Q15697 407 aa14.29□□□□□ -0.12
PRPF40A-203ENST00000448428 PLA2G4FQ68DD2 849 aa14.29□□□□□ -0.12
PRPF40A-203ENST00000448428 NOSTRINQ8IVI9 506 aa14.29□□□□□ -0.12
PRPF40A-203ENST00000448428 C4orf19Q8IY42 314 aa14.29□□□□□ -0.12
PRPF40A-203ENST00000448428 ZNF579Q8NAF0 562 aaKnown RBP14.29□□□□□ -0.12
PRPF40A-203ENST00000448428 SP7Q8TDD2 431 aaPredicted RBP14.29□□□□□ -0.12
PRPF40A-203ENST00000448428 ARNTL2Q8WYA1 636 aa14.29□□□□□ -0.12
PRPF40A-203ENST00000448428 DYDC2Q96IM9 177 aa14.29□□□□□ -0.12
PRPF40A-203ENST00000448428 MAP7D2Q96T17 732 aa14.29□□□□□ -0.12
PRPF40A-203ENST00000448428 OSMRQ99650 979 aa14.29□□□□□ -0.12
PRPF40A-203ENST00000448428 FTHL17Q9BXU8 183 aa14.29□□□□□ -0.12
PRPF40A-203ENST00000448428 ADAMTS10Q9H324 1103 aa14.29□□□□□ -0.12
PRPF40A-203ENST00000448428 ERVK-5Q9HDB9 667 aa14.29□□□□□ -0.12
PRPF40A-203ENST00000448428 ST3GAL5Q9UNP4 418 aa14.29□□□□□ -0.12
PRPF40A-203ENST00000448428 AKT3Q9Y243 479 aa14.29□□□□□ -0.12
PRPF40A-203ENST00000448428 IGKV6-21A0A0C4DH24 114 aa14.28□□□□□ -0.12
PRPF40A-203ENST00000448428 MAFO75444 373 aaPredicted RBP14.28□□□□□ -0.12
PRPF40A-203ENST00000448428 ERVK-21P61565 698 aa14.28□□□□□ -0.12
PRPF40A-203ENST00000448428 CYP4A11Q02928 519 aa14.28□□□□□ -0.12
PRPF40A-203ENST00000448428 CTTNQ14247 550 aaKnown RBP14.28□□□□□ -0.12
PRPF40A-203ENST00000448428 CHD9Q3L8U1 2897 aa14.28□□□□□ -0.12
PRPF40A-203ENST00000448428 TPH2Q8IWU9 490 aa14.28□□□□□ -0.12
PRPF40A-203ENST00000448428 CRIPAKQ8N1N5 446 aa14.28□□□□□ -0.12
PRPF40A-203ENST00000448428 SLC17A8Q8NDX2 589 aa14.28□□□□□ -0.12
PRPF40A-203ENST00000448428 ZNF668Q96K58 619 aaPredicted RBP14.28□□□□□ -0.12
PRPF40A-203ENST00000448428 TGS1Q96RS0 853 aaKnown RBP14.28□□□□□ -0.12
PRPF40A-203ENST00000448428 YME1L1Q96TA2 773 aa14.28□□□□□ -0.12
PRPF40A-203ENST00000448428 HSD17B14Q9BPX1 270 aa14.28□□□□□ -0.12
PRPF40A-203ENST00000448428 EIF2AK1Q9BQI3 630 aaKnown RBP14.28□□□□□ -0.12
PRPF40A-203ENST00000448428 LXNQ9BS40 222 aa14.28□□□□□ -0.12
PRPF40A-203ENST00000448428 TSPYL2Q9H2G4 693 aaPredicted RBP14.28□□□□□ -0.12
PRPF40A-203ENST00000448428 CYP26B1Q9NR63 512 aa14.28□□□□□ -0.12
PRPF40A-203ENST00000448428 NLRC5Q86WI3 1866 aa14.27□□□□□ -0.12
PRPF40A-203ENST00000448428 ARID2Q68CP9 1835 aa14.27□□□□□ -0.12
PRPF40A-203ENST00000448428 GPR182O15218 404 aa14.27□□□□□ -0.13
PRPF40A-203ENST00000448428 GJB2P29033 226 aa14.27□□□□□ -0.13
PRPF40A-203ENST00000448428 YWHABP31946 246 aaKnown RBP14.27□□□□□ -0.13
PRPF40A-203ENST00000448428 TOB1P50616 345 aaPredicted RBP14.27□□□□□ -0.13
PRPF40A-203ENST00000448428 GPC3P51654 580 aa14.27□□□□□ -0.13
PRPF40A-203ENST00000448428 TTC38Q5R3I4 469 aa14.27□□□□□ -0.13
PRPF40A-203ENST00000448428 ODR4Q5SWX8 454 aa14.27□□□□□ -0.13
PRPF40A-203ENST00000448428 FAM228AQ86W67 206 aa14.27□□□□□ -0.13
PRPF40A-203ENST00000448428 ZNF710Q8N1W2 664 aa14.27□□□□□ -0.13
PRPF40A-203ENST00000448428 CEP170P1Q96L14 293 aa14.27□□□□□ -0.13
PRPF40A-203ENST00000448428 ZSWIM4Q9H7M6 989 aa14.27□□□□□ -0.13
PRPF40A-203ENST00000448428 MTUS1Q9ULD2 1270 aa14.27□□□□□ -0.13
PRPF40A-203ENST00000448428 KIF3AQ9Y496 699 aa14.27□□□□□ -0.13
PRPF40A-203ENST00000448428 CDH23Q9H251 3354 aa14.27□□□□□ -0.13
PRPF40A-203ENST00000448428 MGEA5O60502 916 aa14.26□□□□□ -0.13
PRPF40A-203ENST00000448428 LPXNO60711 386 aa14.26□□□□□ -0.13
PRPF40A-203ENST00000448428 POU3F3P20264 500 aaPredicted RBP14.26□□□□□ -0.13
PRPF40A-203ENST00000448428 EIF4BP23588 611 aaKnown RBP14.26□□□□□ -0.13
PRPF40A-203ENST00000448428 TRAPPC10P48553 1259 aa14.26□□□□□ -0.13
PRPF40A-203ENST00000448428 DNM2P50570 870 aa14.26□□□□□ -0.13
PRPF40A-203ENST00000448428 ORC2Q13416 577 aaPredicted RBP14.26□□□□□ -0.13
PRPF40A-203ENST00000448428 NBR1Q14596 966 aa14.26□□□□□ -0.13
PRPF40A-203ENST00000448428 CCDC85BQ15834 202 aaPredicted RBP14.26□□□□□ -0.13
PRPF40A-203ENST00000448428 FAM43BQ6ZT52 329 aaPredicted RBP14.26□□□□□ -0.13
PRPF40A-203ENST00000448428 OTUD6AQ7L8S5 288 aa14.26□□□□□ -0.13
PRPF40A-203ENST00000448428 C4orf32Q8N8J7 132 aa14.26□□□□□ -0.13
PRPF40A-203ENST00000448428 PPM1EQ8WY54 764 aa14.26□□□□□ -0.13
PRPF40A-203ENST00000448428 ADAM2Q99965 735 aa14.26□□□□□ -0.13
PRPF40A-203ENST00000448428 C17orf80Q9BSJ5 609 aa14.26□□□□□ -0.13
PRPF40A-203ENST00000448428 RGS18Q9NS28 235 aa14.26□□□□□ -0.13
PRPF40A-203ENST00000448428 SUCLA2Q9P2R7 463 aaPredicted RBP14.26□□□□□ -0.13
PRPF40A-203ENST00000448428 NOL7Q9UMY1 257 aaKnown RBP14.26□□□□□ -0.13
PRPF40A-203ENST00000448428 A0A087WWV3 80 aa14.25□□□□□ -0.13
PRPF40A-203ENST00000448428 POTEMA6NI47 508 aa14.25□□□□□ -0.13
PRPF40A-203ENST00000448428 CSDE1O75534 798 aaKnown RBP14.25□□□□□ -0.13
PRPF40A-203ENST00000448428 DGKIO75912 1065 aa14.25□□□□□ -0.13
PRPF40A-203ENST00000448428 LYPLA2O95372 231 aa14.25□□□□□ -0.13
PRPF40A-203ENST00000448428 DARSP14868 501 aaKnown RBP14.25□□□□□ -0.13
PRPF40A-203ENST00000448428 TECP42680 631 aa14.25□□□□□ -0.13
PRPF40A-203ENST00000448428 CDC42EP1Q00587 391 aa14.25□□□□□ -0.13
PRPF40A-203ENST00000448428 GRB10Q13322 594 aa14.25□□□□□ -0.13
PRPF40A-203ENST00000448428 DSC3Q14574 896 aa14.25□□□□□ -0.13
PRPF40A-203ENST00000448428 XKR9Q5GH70 373 aa14.25□□□□□ -0.13
PRPF40A-203ENST00000448428 KSR1Q8IVT5 923 aa14.25□□□□□ -0.13
PRPF40A-203ENST00000448428 NLRP7Q8WX94 980 aa14.25□□□□□ -0.13
PRPF40A-203ENST00000448428 ZNF689Q96CS4 500 aaPredicted RBP14.25□□□□□ -0.13
PRPF40A-203ENST00000448428 JPH2Q9BR39 696 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms