RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 PIGOQ8TEQ8 1089 aa8.43□□□□□ -1.06
AC004540.1-206ENST00000448056 PPP1R13LQ8WUF5 828 aa8.43□□□□□ -1.06
AC004540.1-206ENST00000448056 FAM167AQ96KS9 214 aa8.43□□□□□ -1.06
AC004540.1-206ENST00000448056 GBP4Q96PP9 640 aa8.43□□□□□ -1.06
AC004540.1-206ENST00000448056 SEZ6LQ9BYH1 1024 aa8.43□□□□□ -1.06
AC004540.1-206ENST00000448056 NT5C3AQ9H0P0 336 aa8.43□□□□□ -1.06
AC004540.1-206ENST00000448056 C11orf49Q9H6J7 331 aa8.43□□□□□ -1.06
AC004540.1-206ENST00000448056 STARD7Q9NQZ5 370 aa8.43□□□□□ -1.06
AC004540.1-206ENST00000448056 ANKEF1Q9NU02 776 aa8.43□□□□□ -1.06
AC004540.1-206ENST00000448056 DDX19AQ9NUU7 478 aaKnown RBP8.43□□□□□ -1.06
AC004540.1-206ENST00000448056 SETD4Q9NVD3 440 aa8.43□□□□□ -1.06
AC004540.1-206ENST00000448056 FAM13BQ9NYF5 915 aa8.43□□□□□ -1.06
AC004540.1-206ENST00000448056 HDAC6Q9UBN7 1215 aa8.43□□□□□ -1.06
AC004540.1-206ENST00000448056 CCDC39Q9UFE4 941 aa8.43□□□□□ -1.06
AC004540.1-206ENST00000448056 DNM3Q9UQ16 869 aa8.43□□□□□ -1.06
AC004540.1-206ENST00000448056 VPS9D1Q9Y2B5 631 aa8.43□□□□□ -1.06
AC004540.1-206ENST00000448056 ADGRG1Q9Y653 693 aa8.43□□□□□ -1.06
AC004540.1-206ENST00000448056 A0A087X0B3 334 aa8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 A0A0U1RQG5 324 aaPredicted RBP8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 FAM237AA0A1B0GTK4 181 aa8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 A0A1B0GVL5 298 aa8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 TMEM150BA6NC51 233 aa8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 RRN3P2A6NIE6 340 aa8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 ZBTB42B2RXF5 422 aa8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 TRIM66O15016 1216 aa8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 GADD45BO75293 160 aaPredicted RBP8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 GNAT1P11488 350 aa8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 PLCG1P19174 1290 aa8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 HOXC8P31273 242 aa8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 NPEPPSP55786 919 aa8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 PTPN11Q06124 597 aaPredicted RBP8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 PPFIA1Q13136 1202 aa8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 TARBP2Q15633 366 aaKnown RBP8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 ZNF484Q5JVG2 852 aa8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 MARCH8Q5T0T0 291 aa8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 C1orf53Q5VUE5 145 aa8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 KCNK18Q7Z418 384 aa8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 SESTD1Q86VW0 696 aa8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 FSIP1Q8NA03 581 aa8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 RASSF8Q8NHQ8 419 aa8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 CDK5RAP3Q96JB5 506 aa8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 CEP170P1Q96L14 293 aa8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 CEP89Q96ST8 783 aa8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 CYP26B1Q9NR63 512 aa8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 KIAA1468Q9P260 1216 aa8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 RABGEF1Q9UJ41 708 aa8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 DBR1Q9UK59 544 aaKnown RBP8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 KCNH3Q9ULD8 1083 aa8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 HPSEQ9Y251 543 aa8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 NRCAMQ92823 1304 aa8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 KDM3AQ9Y4C1 1321 aa8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 DOCK5Q9H7D0 1870 aa8.42□□□□□ -1.06
AC004540.1-206ENST00000448056 DNAH12Q6ZR08 3092 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 KIAA0100Q14667 2235 aaKnown RBP8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 MYH15Q9Y2K3 1946 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 C17orf102A2RUQ5 167 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 E9PMD0 336 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 C3orf80F5H4A9 247 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 POLR2DO15514 142 aaKnown RBP8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 EYA4O95677 639 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 PFKFB1P16118 471 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 KLRC1P26715 233 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 RARRES1P49788 294 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 NDUFA8P51970 172 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 SOX10P56693 466 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 UBE2HP62256 183 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 IGBP1P78318 339 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 ADAM17P78536 824 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 LSM11P83369 360 aaKnown RBP eCLIP8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 ZNF200P98182 395 aaPredicted RBP8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 SNX17Q15036 470 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 GRIK4Q16099 956 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 MTERF2Q49AM1 385 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 NAALADL2Q58DX5 795 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 XKR9Q5GH70 373 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 FAM47CQ5HY64 1035 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 PLA2G4FQ68DD2 849 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 GDF6Q6KF10 455 aaPredicted RBP8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 MTHFD1LQ6UB35 978 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 CCDC73Q6ZRK6 1079 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 PDILTQ8N807 584 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 SYT2Q8N9I0 419 aaPredicted RBP8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 IQUBQ8NA54 791 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 LRRC15Q8TF66 581 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 LMBR1Q8WVP7 490 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 TRAPPC12Q8WVT3 735 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 MRPS27Q92552 414 aaKnown RBP8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 RAD54LQ92698 747 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 SH2D3AQ9BRG2 576 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 BHMT2Q9H2M3 363 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 GOLPH3LQ9H4A5 285 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 LMBRD1Q9NUN5 540 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 BLOC1S4Q9NUP1 217 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 SEPT9Q9UHD8 586 aaPredicted RBP8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 GTF2IRD1Q9UHL9 959 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 PPME1Q9Y570 386 aa8.41□□□□□ -1.06
AC004540.1-206ENST00000448056 COL1A2P08123 1366 aa8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 MBLAC1A4D2B0 266 aaPredicted RBP8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 ARHGEF35A5YM69 484 aa8.4□□□□□ -1.06
AC004540.1-206ENST00000448056 BHMG1C9JSJ3 638 aaPredicted RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms