RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 HOXA2O43364 376 aa8.14□□□□□ -1.11
LRRC28-203ENST00000447360 MGEA5O60502 916 aa8.14□□□□□ -1.11
LRRC28-203ENST00000447360 ATP9AO75110 1047 aa8.14□□□□□ -1.11
LRRC28-203ENST00000447360 RPS6KA5O75582 802 aa8.14□□□□□ -1.11
LRRC28-203ENST00000447360 FAM189BP81408 668 aa8.14□□□□□ -1.11
LRRC28-203ENST00000447360 KRT76Q01546 638 aa8.14□□□□□ -1.11
LRRC28-203ENST00000447360 BMS1Q14692 1282 aaKnown RBP8.14□□□□□ -1.11
LRRC28-203ENST00000447360 TMEM266Q2M3C6 531 aa8.14□□□□□ -1.11
LRRC28-203ENST00000447360 KCNT2Q6UVM3 1135 aa8.14□□□□□ -1.11
LRRC28-203ENST00000447360 HOMER1Q86YM7 354 aa8.14□□□□□ -1.11
LRRC28-203ENST00000447360 ZBTB10Q96DT7 871 aa8.14□□□□□ -1.11
LRRC28-203ENST00000447360 ZNF558Q96NG5 402 aa8.14□□□□□ -1.11
LRRC28-203ENST00000447360 ADAM2Q99965 735 aa8.14□□□□□ -1.11
LRRC28-203ENST00000447360 UBAC1Q9BSL1 405 aa8.14□□□□□ -1.11
LRRC28-203ENST00000447360 ZMYND15Q9H091 742 aa8.14□□□□□ -1.11
LRRC28-203ENST00000447360 ATP6V0A4Q9HBG4 840 aa8.14□□□□□ -1.11
LRRC28-203ENST00000447360 ERVK-5Q9HDB9 667 aa8.14□□□□□ -1.11
LRRC28-203ENST00000447360 DZANK1Q9NVP4 752 aa8.14□□□□□ -1.11
LRRC28-203ENST00000447360 SPG21Q9NZD8 308 aa8.14□□□□□ -1.11
LRRC28-203ENST00000447360 HCSTQ9UBK5 93 aa8.14□□□□□ -1.11
LRRC28-203ENST00000447360 FBXL21Q9UKT6 434 aa8.14□□□□□ -1.11
LRRC28-203ENST00000447360 DUSP12Q9UNI6 340 aa8.14□□□□□ -1.11
LRRC28-203ENST00000447360 GPR179Q6PRD1 2367 aa8.14□□□□□ -1.11
LRRC28-203ENST00000447360 B4E1Z4 1266 aa8.13□□□□□ -1.11
LRRC28-203ENST00000447360 PIK3CDO00329 1044 aa8.13□□□□□ -1.11
LRRC28-203ENST00000447360 CLASP2O75122 1294 aaKnown RBP8.13□□□□□ -1.11
LRRC28-203ENST00000447360 FGFR1P11362 822 aa8.13□□□□□ -1.11
LRRC28-203ENST00000447360 IBSPP21815 317 aaPredicted RBP8.13□□□□□ -1.11
LRRC28-203ENST00000447360 NMIQ13287 307 aaPredicted RBP8.13□□□□□ -1.11
LRRC28-203ENST00000447360 RARS2Q5T160 578 aaKnown RBP8.13□□□□□ -1.11
LRRC28-203ENST00000447360 OTOP3Q7RTS5 596 aa8.13□□□□□ -1.11
LRRC28-203ENST00000447360 PLPPR4Q7Z2D5 763 aa8.13□□□□□ -1.11
LRRC28-203ENST00000447360 SIX5Q8N196 739 aa8.13□□□□□ -1.11
LRRC28-203ENST00000447360 BORCS6Q96GS4 357 aa8.13□□□□□ -1.11
LRRC28-203ENST00000447360 PIGSQ96S52 555 aa8.13□□□□□ -1.11
LRRC28-203ENST00000447360 HINFPQ9BQA5 517 aa8.13□□□□□ -1.11
LRRC28-203ENST00000447360 KRT23Q9C075 422 aa8.13□□□□□ -1.11
LRRC28-203ENST00000447360 TMEM117Q9H0C3 514 aa8.13□□□□□ -1.11
LRRC28-203ENST00000447360 AZI2Q9H6S1 392 aa8.13□□□□□ -1.11
LRRC28-203ENST00000447360 CNNM2Q9H8M5 875 aa8.13□□□□□ -1.11
LRRC28-203ENST00000447360 KCNK12Q9HB15 430 aa8.13□□□□□ -1.11
LRRC28-203ENST00000447360 IGSF9Q9P2J2 1179 aa8.13□□□□□ -1.11
LRRC28-203ENST00000447360 WNT16Q9UBV4 365 aa8.13□□□□□ -1.11
LRRC28-203ENST00000447360 ST3GAL5Q9UNP4 418 aa8.13□□□□□ -1.11
LRRC28-203ENST00000447360 NOC2LQ9Y3T9 749 aaKnown RBP8.13□□□□□ -1.11
LRRC28-203ENST00000447360 R4GN57 208 aa8.13□□□□□ -1.11
LRRC28-203ENST00000447360 MYO10Q9HD67 2058 aa8.13□□□□□ -1.11
LRRC28-203ENST00000447360 MEIS2O14770 477 aa8.12□□□□□ -1.11
LRRC28-203ENST00000447360 CYTH3O43739 400 aa8.12□□□□□ -1.11
LRRC28-203ENST00000447360 WEE2P0C1S8 567 aa8.12□□□□□ -1.11
LRRC28-203ENST00000447360 ITGB5P18084 799 aa8.12□□□□□ -1.11
LRRC28-203ENST00000447360 SLC26A2P50443 739 aa8.12□□□□□ -1.11
LRRC28-203ENST00000447360 TBC1D8BQ0IIM8 1120 aa8.12□□□□□ -1.11
LRRC28-203ENST00000447360 CAMK2BQ13554 666 aa8.12□□□□□ -1.11
LRRC28-203ENST00000447360 MTMR1Q13613 665 aa8.12□□□□□ -1.11
LRRC28-203ENST00000447360 GIT2Q14161 759 aa8.12□□□□□ -1.11
LRRC28-203ENST00000447360 SEC23AQ15436 765 aa8.12□□□□□ -1.11
LRRC28-203ENST00000447360 RSPO4Q2I0M5 234 aaPredicted RBP8.12□□□□□ -1.11
LRRC28-203ENST00000447360 SLC35G1Q2M3R5 365 aa8.12□□□□□ -1.11
LRRC28-203ENST00000447360 MTHFD1LQ6UB35 978 aa8.12□□□□□ -1.11
LRRC28-203ENST00000447360 LRRC55Q6ZSA7 311 aa8.12□□□□□ -1.11
LRRC28-203ENST00000447360 GPIHBP1Q8IV16 184 aa8.12□□□□□ -1.11
LRRC28-203ENST00000447360 LRRC43Q8N309 656 aa8.12□□□□□ -1.11
LRRC28-203ENST00000447360 GPR161Q8N6U8 529 aaKnown RBP8.12□□□□□ -1.11
LRRC28-203ENST00000447360 EFCAB3Q8N7B9 438 aa8.12□□□□□ -1.11
LRRC28-203ENST00000447360 SMARCC2Q8TAQ2 1214 aa8.12□□□□□ -1.11
LRRC28-203ENST00000447360 CUL5Q93034 780 aa8.12□□□□□ -1.11
LRRC28-203ENST00000447360 CASD1Q96PB1 797 aa8.12□□□□□ -1.11
LRRC28-203ENST00000447360 PCYT2Q99447 389 aa8.12□□□□□ -1.11
LRRC28-203ENST00000447360 GINS2Q9Y248 185 aa8.12□□□□□ -1.11
LRRC28-203ENST00000447360 IRAK3Q9Y616 596 aa8.12□□□□□ -1.11
LRRC28-203ENST00000447360 PLXNA4Q9HCM2 1894 aa8.12□□□□□ -1.11
LRRC28-203ENST00000447360 ATRXP46100 2492 aa8.12□□□□□ -1.11
LRRC28-203ENST00000447360 KIAA1671Q9BY89 1806 aa8.11□□□□□ -1.11
LRRC28-203ENST00000447360 CARNS1A5YM72 827 aa8.11□□□□□ -1.11
LRRC28-203ENST00000447360 CXCL14O95715 111 aa8.11□□□□□ -1.11
LRRC28-203ENST00000447360 ARP10275 920 aa8.11□□□□□ -1.11
LRRC28-203ENST00000447360 PBX3P40426 434 aa8.11□□□□□ -1.11
LRRC28-203ENST00000447360 ALDH7A1P49419 539 aaKnown RBP8.11□□□□□ -1.11
LRRC28-203ENST00000447360 CRYBB1P53674 252 aaPredicted RBP8.11□□□□□ -1.11
LRRC28-203ENST00000447360 PDE1AP54750 535 aa8.11□□□□□ -1.11
LRRC28-203ENST00000447360 HDAC1Q13547 482 aaPredicted RBP8.11□□□□□ -1.11
LRRC28-203ENST00000447360 GRM4Q14833 912 aa8.11□□□□□ -1.11
LRRC28-203ENST00000447360 PLCB4Q15147 1175 aa8.11□□□□□ -1.11
LRRC28-203ENST00000447360 NONOQ15233 471 aaKnown RBP eCLIP8.11□□□□□ -1.11
LRRC28-203ENST00000447360 IMMTQ16891 758 aaKnown RBP8.11□□□□□ -1.11
LRRC28-203ENST00000447360 KIAA0319Q5VV43 1072 aa8.11□□□□□ -1.11
LRRC28-203ENST00000447360 USP17L6PQ6QN14 398 aa8.11□□□□□ -1.11
LRRC28-203ENST00000447360 CCDC149Q6ZUS6 474 aa8.11□□□□□ -1.11
LRRC28-203ENST00000447360 GPR149Q86SP6 731 aa8.11□□□□□ -1.11
LRRC28-203ENST00000447360 CABP7Q86V35 215 aa8.11□□□□□ -1.11
LRRC28-203ENST00000447360 KIAA0319LQ8IZA0 1049 aa8.11□□□□□ -1.11
LRRC28-203ENST00000447360 ABI1Q8IZP0 508 aa8.11□□□□□ -1.11
LRRC28-203ENST00000447360 SLC39A11Q8N1S5 342 aa8.11□□□□□ -1.11
LRRC28-203ENST00000447360 C12orf76Q8N812 135 aaPredicted RBP8.11□□□□□ -1.11
LRRC28-203ENST00000447360 TMEM87AQ8NBN3 555 aa8.11□□□□□ -1.11
LRRC28-203ENST00000447360 EXOC6Q8TAG9 804 aa8.11□□□□□ -1.11
LRRC28-203ENST00000447360 TRAPPC12Q8WVT3 735 aa8.11□□□□□ -1.11
LRRC28-203ENST00000447360 TMEM40Q8WWA1 233 aa8.11□□□□□ -1.11
LRRC28-203ENST00000447360 DDX27Q96GQ7 796 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms