RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 FBXO47Q5MNV8 452 aa13.32□□□□□ -0.28
RFC4-208ENST00000447345 RASIP1Q5U651 963 aa13.32□□□□□ -0.28
RFC4-208ENST00000447345 HAUS3Q68CZ6 603 aa13.32□□□□□ -0.28
RFC4-208ENST00000447345 FOXD4L3Q6VB84 417 aaPredicted RBP13.32□□□□□ -0.28
RFC4-208ENST00000447345 TMCO2Q7Z6W1 182 aaPredicted RBP13.32□□□□□ -0.28
RFC4-208ENST00000447345 CATSPER3Q86XQ3 398 aa13.32□□□□□ -0.28
RFC4-208ENST00000447345 SEPT8Q92599 483 aa13.32□□□□□ -0.28
RFC4-208ENST00000447345 SCLT1Q96NL6 688 aa13.32□□□□□ -0.28
RFC4-208ENST00000447345 CEP89Q96ST8 783 aa13.32□□□□□ -0.28
RFC4-208ENST00000447345 OSMRQ99650 979 aa13.32□□□□□ -0.28
RFC4-208ENST00000447345 IFIH1Q9BYX4 1025 aaKnown RBP13.32□□□□□ -0.28
RFC4-208ENST00000447345 CELF4Q9BZC1 486 aaKnown RBP13.32□□□□□ -0.28
RFC4-208ENST00000447345 RAB34Q9BZG1 259 aa13.32□□□□□ -0.28
RFC4-208ENST00000447345 CLIC4Q9Y696 253 aa13.32□□□□□ -0.28
RFC4-208ENST00000447345 SLC4A7Q9Y6M7 1214 aa13.32□□□□□ -0.28
RFC4-208ENST00000447345 SPATA31C1P0DKV0 1188 aa13.31□□□□□ -0.28
RFC4-208ENST00000447345 CDC25AP30304 524 aa13.31□□□□□ -0.28
RFC4-208ENST00000447345 CD52P31358 61 aa13.31□□□□□ -0.28
RFC4-208ENST00000447345 PRPHP41219 470 aa13.31□□□□□ -0.28
RFC4-208ENST00000447345 KCNJ6P48051 423 aa13.31□□□□□ -0.28
RFC4-208ENST00000447345 DEFB103AP81534 67 aa13.31□□□□□ -0.28
RFC4-208ENST00000447345 BECN1Q14457 450 aa13.31□□□□□ -0.28
RFC4-208ENST00000447345 EMC2Q15006 297 aa13.31□□□□□ -0.28
RFC4-208ENST00000447345 PLEKHG4Q58EX7 1191 aa13.31□□□□□ -0.28
RFC4-208ENST00000447345 TSHZ1Q6ZSZ6 1077 aa13.31□□□□□ -0.28
RFC4-208ENST00000447345 OTUD6AQ7L8S5 288 aa13.31□□□□□ -0.28
RFC4-208ENST00000447345 LINC01465Q8N7H1 131 aa13.31□□□□□ -0.28
RFC4-208ENST00000447345 SLC7A3Q8WY07 619 aa13.31□□□□□ -0.28
RFC4-208ENST00000447345 AGO3Q9H9G7 860 aaKnown RBP13.31□□□□□ -0.28
RFC4-208ENST00000447345 CDHR5Q9HBB8 845 aa13.31□□□□□ -0.28
RFC4-208ENST00000447345 TUFT1Q9NNX1 390 aa13.31□□□□□ -0.28
RFC4-208ENST00000447345 KIAA1671Q9BY89 1806 aa13.31□□□□□ -0.28
RFC4-208ENST00000447345 USO1O60763 962 aaKnown RBP13.3□□□□□ -0.28
RFC4-208ENST00000447345 MAFO75444 373 aaPredicted RBP13.3□□□□□ -0.28
RFC4-208ENST00000447345 BAIAP3O94812 1187 aa13.3□□□□□ -0.28
RFC4-208ENST00000447345 ATP2A2P16615 1042 aaKnown RBP13.3□□□□□ -0.28
RFC4-208ENST00000447345 IBSPP21815 317 aaPredicted RBP13.3□□□□□ -0.28
RFC4-208ENST00000447345 PBX2P40425 430 aa13.3□□□□□ -0.28
RFC4-208ENST00000447345 RABGGTBP53611 331 aa13.3□□□□□ -0.28
RFC4-208ENST00000447345 NLRP11P59045 1033 aaKnown RBP13.3□□□□□ -0.28
RFC4-208ENST00000447345 WDR5P61964 334 aaKnown RBP13.3□□□□□ -0.28
RFC4-208ENST00000447345 PAK2Q13177 524 aa13.3□□□□□ -0.28
RFC4-208ENST00000447345 MKRN4PQ13434 485 aaPredicted RBP13.3□□□□□ -0.28
RFC4-208ENST00000447345 IKBKEQ14164 716 aa13.3□□□□□ -0.28
RFC4-208ENST00000447345 ECM1Q16610 540 aa13.3□□□□□ -0.28
RFC4-208ENST00000447345 NME8Q8N427 588 aa13.3□□□□□ -0.28
RFC4-208ENST00000447345 IGSF22Q8N9C0 903 aa13.3□□□□□ -0.28
RFC4-208ENST00000447345 TMEM40Q8WWA1 233 aa13.3□□□□□ -0.28
RFC4-208ENST00000447345 NLRP7Q8WX94 980 aa13.3□□□□□ -0.28
RFC4-208ENST00000447345 TMEM143Q96AN5 459 aa13.3□□□□□ -0.28
RFC4-208ENST00000447345 NLRP4Q96MN2 994 aa13.3□□□□□ -0.28
RFC4-208ENST00000447345 POLR3CQ9BUI4 534 aaPredicted RBP13.3□□□□□ -0.28
RFC4-208ENST00000447345 ZSCAN16Q9H4T2 348 aaPredicted RBP13.3□□□□□ -0.28
RFC4-208ENST00000447345 COL4A4P53420 1690 aaPredicted RBP13.29□□□□□ -0.28
RFC4-208ENST00000447345 LYPLA2O95372 231 aa13.29□□□□□ -0.28
RFC4-208ENST00000447345 ZSCAN22P10073 491 aaPredicted RBP13.29□□□□□ -0.28
RFC4-208ENST00000447345 RPA1P27694 616 aa13.29□□□□□ -0.28
RFC4-208ENST00000447345 MARCKSP29966 332 aaPredicted RBP13.29□□□□□ -0.28
RFC4-208ENST00000447345 RFC5P40937 340 aa13.29□□□□□ -0.28
RFC4-208ENST00000447345 RARRES1P49788 294 aa13.29□□□□□ -0.28
RFC4-208ENST00000447345 DNM2P50570 870 aa13.29□□□□□ -0.28
RFC4-208ENST00000447345 GPC3P51654 580 aa13.29□□□□□ -0.28
RFC4-208ENST00000447345 GRIN1Q05586 938 aa13.29□□□□□ -0.28
RFC4-208ENST00000447345 PDIA5Q14554 519 aa13.29□□□□□ -0.28
RFC4-208ENST00000447345 KRT79Q5XKE5 535 aa13.29□□□□□ -0.28
RFC4-208ENST00000447345 FAM117BQ6P1L5 589 aa13.29□□□□□ -0.28
RFC4-208ENST00000447345 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.29□□□□□ -0.28
RFC4-208ENST00000447345 RHPN2Q8IUC4 686 aa13.29□□□□□ -0.28
RFC4-208ENST00000447345 KSR1Q8IVT5 923 aa13.29□□□□□ -0.28
RFC4-208ENST00000447345 USP28Q96RU2 1077 aa13.29□□□□□ -0.28
RFC4-208ENST00000447345 SLC9A7Q96T83 725 aa13.29□□□□□ -0.28
RFC4-208ENST00000447345 PLIN2Q99541 437 aa13.29□□□□□ -0.28
RFC4-208ENST00000447345 MTRQ99707 1265 aa13.29□□□□□ -0.28
RFC4-208ENST00000447345 ANKEF1Q9NU02 776 aa13.29□□□□□ -0.28
RFC4-208ENST00000447345 DDX19AQ9NUU7 478 aaKnown RBP13.29□□□□□ -0.28
RFC4-208ENST00000447345 SUCLA2Q9P2R7 463 aaPredicted RBP13.29□□□□□ -0.28
RFC4-208ENST00000447345 DAXXQ9UER7 740 aaPredicted RBP13.29□□□□□ -0.28
RFC4-208ENST00000447345 KIAA1024Q9UPX6 916 aa13.29□□□□□ -0.28
RFC4-208ENST00000447345 NOC2LQ9Y3T9 749 aaKnown RBP13.29□□□□□ -0.28
RFC4-208ENST00000447345 KDM3AQ9Y4C1 1321 aa13.29□□□□□ -0.28
RFC4-208ENST00000447345 TTC3P53804 2025 aa13.29□□□□□ -0.28
RFC4-208ENST00000447345 SZT2Q5T011 3432 aa13.28□□□□□ -0.28
RFC4-208ENST00000447345 IGKV6-21A0A0C4DH24 114 aa13.28□□□□□ -0.28
RFC4-208ENST00000447345 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.28□□□□□ -0.28
RFC4-208ENST00000447345 ABHD14A-ACY1A0A1B0GW23 586 aa13.28□□□□□ -0.28
RFC4-208ENST00000447345 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.28□□□□□ -0.28
RFC4-208ENST00000447345 GPR32O75388 356 aa13.28□□□□□ -0.28
RFC4-208ENST00000447345 RPS6KA5O75582 802 aa13.28□□□□□ -0.28
RFC4-208ENST00000447345 BMP15O95972 392 aa13.28□□□□□ -0.28
RFC4-208ENST00000447345 F13A1P00488 732 aa13.28□□□□□ -0.28
RFC4-208ENST00000447345 CRYBB1P53674 252 aaPredicted RBP13.28□□□□□ -0.28
RFC4-208ENST00000447345 SMAD3P84022 425 aaKnown RBP13.28□□□□□ -0.28
RFC4-208ENST00000447345 NFX1Q12986 1120 aaKnown RBP13.28□□□□□ -0.28
RFC4-208ENST00000447345 PTPAQ15257 358 aa13.28□□□□□ -0.28
RFC4-208ENST00000447345 ARL6IP4Q66PJ3 421 aaKnown RBP13.28□□□□□ -0.28
RFC4-208ENST00000447345 MAEAQ7L5Y9 396 aa13.28□□□□□ -0.28
RFC4-208ENST00000447345 MYOCDQ8IZQ8 938 aa13.28□□□□□ -0.28
RFC4-208ENST00000447345 APBB2Q92870 758 aa13.28□□□□□ -0.28
RFC4-208ENST00000447345 NACC1Q96RE7 527 aa13.28□□□□□ -0.28
RFC4-208ENST00000447345 JPH2Q9BR39 696 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms