RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 CLCN3P51790 818 aa12.09□□□□□ -0.47
HDAC6-211ENST00000443563 GPNMBQ14956 572 aa12.09□□□□□ -0.47
HDAC6-211ENST00000443563 PLEKHG4Q58EX7 1191 aa12.09□□□□□ -0.47
HDAC6-211ENST00000443563 RASIP1Q5U651 963 aa12.09□□□□□ -0.47
HDAC6-211ENST00000443563 PLA2G4FQ68DD2 849 aa12.09□□□□□ -0.47
HDAC6-211ENST00000443563 ATL3Q6DD88 541 aa12.09□□□□□ -0.47
HDAC6-211ENST00000443563 TSHZ1Q6ZSZ6 1077 aa12.09□□□□□ -0.47
HDAC6-211ENST00000443563 OTOP2Q7RTS6 562 aa12.09□□□□□ -0.47
HDAC6-211ENST00000443563 LINC01465Q8N7H1 131 aa12.09□□□□□ -0.47
HDAC6-211ENST00000443563 TCP11Q8WWU5 503 aa12.09□□□□□ -0.47
HDAC6-211ENST00000443563 CEP89Q96ST8 783 aa12.09□□□□□ -0.47
HDAC6-211ENST00000443563 NT5C3AQ9H0P0 336 aa12.09□□□□□ -0.47
HDAC6-211ENST00000443563 DHX33Q9H6R0 707 aaKnown RBP12.09□□□□□ -0.47
HDAC6-211ENST00000443563 DBR1Q9UK59 544 aaKnown RBP12.09□□□□□ -0.47
HDAC6-211ENST00000443563 SLC4A7Q9Y6M7 1214 aa12.09□□□□□ -0.47
HDAC6-211ENST00000443563 MORC2Q9Y6X9 1032 aaPredicted RBP12.09□□□□□ -0.47
HDAC6-211ENST00000443563 TMEM150BA6NC51 233 aa12.08□□□□□ -0.48
HDAC6-211ENST00000443563 DGAT1O75907 488 aa12.08□□□□□ -0.48
HDAC6-211ENST00000443563 F13A1P00488 732 aa12.08□□□□□ -0.48
HDAC6-211ENST00000443563 KCNJ6P48051 423 aa12.08□□□□□ -0.48
HDAC6-211ENST00000443563 RARRES1P49788 294 aa12.08□□□□□ -0.48
HDAC6-211ENST00000443563 CRYBB1P53674 252 aaPredicted RBP12.08□□□□□ -0.48
HDAC6-211ENST00000443563 NPEPPSP55786 919 aa12.08□□□□□ -0.48
HDAC6-211ENST00000443563 TMEM62Q0P6H9 643 aa12.08□□□□□ -0.48
HDAC6-211ENST00000443563 MBTPS1Q14703 1052 aa12.08□□□□□ -0.48
HDAC6-211ENST00000443563 FBXO47Q5MNV8 452 aa12.08□□□□□ -0.48
HDAC6-211ENST00000443563 LRRC71Q8N4P6 559 aa12.08□□□□□ -0.48
HDAC6-211ENST00000443563 CDK5RAP3Q96JB5 506 aa12.08□□□□□ -0.48
HDAC6-211ENST00000443563 MTRQ99707 1265 aa12.08□□□□□ -0.48
HDAC6-211ENST00000443563 SH2D3AQ9BRG2 576 aa12.08□□□□□ -0.48
HDAC6-211ENST00000443563 IFIH1Q9BYX4 1025 aaKnown RBP12.08□□□□□ -0.48
HDAC6-211ENST00000443563 CLIC4Q9Y696 253 aa12.08□□□□□ -0.48
HDAC6-211ENST00000443563 MICAL3Q7RTP6 2002 aa12.08□□□□□ -0.48
HDAC6-211ENST00000443563 LAMA3Q16787 3333 aa12.08□□□□□ -0.48
HDAC6-211ENST00000443563 TET1Q8NFU7 2136 aa12.07□□□□□ -0.48
HDAC6-211ENST00000443563 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.07□□□□□ -0.48
HDAC6-211ENST00000443563 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.07□□□□□ -0.48
HDAC6-211ENST00000443563 ARHGEF35A5YM69 484 aa12.07□□□□□ -0.48
HDAC6-211ENST00000443563 ASAP2O43150 1006 aa12.07□□□□□ -0.48
HDAC6-211ENST00000443563 VTNP04004 478 aa12.07□□□□□ -0.48
HDAC6-211ENST00000443563 GHRP10912 638 aa12.07□□□□□ -0.48
HDAC6-211ENST00000443563 UBA7P41226 1012 aa12.07□□□□□ -0.48
HDAC6-211ENST00000443563 NLRP11P59045 1033 aaKnown RBP12.07□□□□□ -0.48
HDAC6-211ENST00000443563 SMAD3P84022 425 aaKnown RBP12.07□□□□□ -0.48
HDAC6-211ENST00000443563 PAK2Q13177 524 aa12.07□□□□□ -0.48
HDAC6-211ENST00000443563 LPIN1Q14693 890 aa12.07□□□□□ -0.48
HDAC6-211ENST00000443563 EMC2Q15006 297 aa12.07□□□□□ -0.48
HDAC6-211ENST00000443563 IL17AQ16552 155 aa12.07□□□□□ -0.48
HDAC6-211ENST00000443563 KIZQ2M2Z5 673 aa12.07□□□□□ -0.48
HDAC6-211ENST00000443563 POTEGQ6S5H5 508 aa12.07□□□□□ -0.48
HDAC6-211ENST00000443563 DBF4BQ8NFT6 615 aa12.07□□□□□ -0.48
HDAC6-211ENST00000443563 PHOSPHO2Q8TCD6 241 aa12.07□□□□□ -0.48
HDAC6-211ENST00000443563 PIGOQ8TEQ8 1089 aa12.07□□□□□ -0.48
HDAC6-211ENST00000443563 PSPC1Q8WXF1 523 aaKnown RBP12.07□□□□□ -0.48
HDAC6-211ENST00000443563 VWCEQ96DN2 955 aa12.07□□□□□ -0.48
HDAC6-211ENST00000443563 CALML4Q96GE6 196 aa12.07□□□□□ -0.48
HDAC6-211ENST00000443563 SCLT1Q96NL6 688 aa12.07□□□□□ -0.48
HDAC6-211ENST00000443563 SLC9A7Q96T83 725 aa12.07□□□□□ -0.48
HDAC6-211ENST00000443563 FTHL17Q9BXU8 183 aa12.07□□□□□ -0.48
HDAC6-211ENST00000443563 INO80BQ9C086 356 aaPredicted RBP12.07□□□□□ -0.48
HDAC6-211ENST00000443563 ATP6V0A4Q9HBG4 840 aa12.07□□□□□ -0.48
HDAC6-211ENST00000443563 DDX19AQ9NUU7 478 aaKnown RBP12.07□□□□□ -0.48
HDAC6-211ENST00000443563 SUCLA2Q9P2R7 463 aaPredicted RBP12.07□□□□□ -0.48
HDAC6-211ENST00000443563 DAXXQ9UER7 740 aaPredicted RBP12.07□□□□□ -0.48
HDAC6-211ENST00000443563 CFAP45Q9UL16 551 aa12.07□□□□□ -0.48
HDAC6-211ENST00000443563 KIAA1024Q9UPX6 916 aa12.07□□□□□ -0.48
HDAC6-211ENST00000443563 DNM3Q9UQ16 869 aa12.07□□□□□ -0.48
HDAC6-211ENST00000443563 GINS2Q9Y248 185 aa12.07□□□□□ -0.48
HDAC6-211ENST00000443563 ATP6V1DQ9Y5K8 247 aa12.07□□□□□ -0.48
HDAC6-211ENST00000443563 SRPRBQ9Y5M8 271 aaKnown RBP12.07□□□□□ -0.48
HDAC6-211ENST00000443563 ZBTB39O15060 712 aa12.06□□□□□ -0.48
HDAC6-211ENST00000443563 GPR182O15218 404 aa12.06□□□□□ -0.48
HDAC6-211ENST00000443563 GPR32O75388 356 aa12.06□□□□□ -0.48
HDAC6-211ENST00000443563 RPS6KA5O75582 802 aa12.06□□□□□ -0.48
HDAC6-211ENST00000443563 YEATS4O95619 227 aa12.06□□□□□ -0.48
HDAC6-211ENST00000443563 TXLNAP40222 546 aa12.06□□□□□ -0.48
HDAC6-211ENST00000443563 NASPP49321 788 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-211ENST00000443563 GPC3P51654 580 aa12.06□□□□□ -0.48
HDAC6-211ENST00000443563 CEBPZQ03701 1054 aaKnown RBP12.06□□□□□ -0.48
HDAC6-211ENST00000443563 MXD4Q14582 209 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-211ENST00000443563 SLC39A14Q15043 492 aa12.06□□□□□ -0.48
HDAC6-211ENST00000443563 STK38Q15208 465 aa12.06□□□□□ -0.48
HDAC6-211ENST00000443563 PTPAQ15257 358 aa12.06□□□□□ -0.48
HDAC6-211ENST00000443563 HYIQ5T013 277 aa12.06□□□□□ -0.48
HDAC6-211ENST00000443563 FAM173BQ6P4H8 233 aa12.06□□□□□ -0.48
HDAC6-211ENST00000443563 CABP7Q86V35 215 aa12.06□□□□□ -0.48
HDAC6-211ENST00000443563 ZNF410Q86VK4 478 aa12.06□□□□□ -0.48
HDAC6-211ENST00000443563 RHPN2Q8IUC4 686 aa12.06□□□□□ -0.48
HDAC6-211ENST00000443563 ZNF579Q8NAF0 562 aaKnown RBP12.06□□□□□ -0.48
HDAC6-211ENST00000443563 MCPH1Q8NEM0 835 aa12.06□□□□□ -0.48
HDAC6-211ENST00000443563 NLRP7Q8WX94 980 aa12.06□□□□□ -0.48
HDAC6-211ENST00000443563 USP28Q96RU2 1077 aa12.06□□□□□ -0.48
HDAC6-211ENST00000443563 GCOM2Q9BZD3 368 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-211ENST00000443563 RNF216Q9NWF9 866 aaPredicted RBP12.06□□□□□ -0.48
HDAC6-211ENST00000443563 COL4A3BPQ9Y5P4 624 aa12.06□□□□□ -0.48
HDAC6-211ENST00000443563 PP2D1A8MPX8 630 aa12.05□□□□□ -0.48
HDAC6-211ENST00000443563 EYA4O95677 639 aa12.05□□□□□ -0.48
HDAC6-211ENST00000443563 BRD1O95696 1058 aa12.05□□□□□ -0.48
HDAC6-211ENST00000443563 AMHP03971 560 aa12.05□□□□□ -0.48
HDAC6-211ENST00000443563 ATP2A2P16615 1042 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms