RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 MRFAP1Q9Y605 127 aa24.18■■□□□ 1.46
CTDSPL-206ENST00000443503 RWDD2BP57060 319 aa24.18■■□□□ 1.46
CTDSPL-206ENST00000443503 PPP2R5CQ13362 524 aa24.18■■□□□ 1.46
CTDSPL-206ENST00000443503 RNF10Q8N5U6 811 aaKnown RBP24.18■■□□□ 1.46
CTDSPL-206ENST00000443503 NSMCE1Q8WV22 266 aa24.18■■□□□ 1.46
CTDSPL-206ENST00000443503 SH2D3AQ9BRG2 576 aa24.18■■□□□ 1.46
CTDSPL-206ENST00000443503 GPR75-ASB3A0A0A6YYF3 556 aa24.17■■□□□ 1.46
CTDSPL-206ENST00000443503 IFT88Q13099 833 aa24.17■■□□□ 1.46
CTDSPL-206ENST00000443503 SLFN12LQ6IEE8 588 aa24.17■■□□□ 1.46
CTDSPL-206ENST00000443503 ZNF746Q6NUN9 644 aaPredicted RBP24.17■■□□□ 1.46
CTDSPL-206ENST00000443503 ZMYND12Q9H0C1 365 aa24.17■■□□□ 1.46
CTDSPL-206ENST00000443503 NOVA2Q9UNW9 492 aaKnown RBP24.17■■□□□ 1.46
CTDSPL-206ENST00000443503 A6NJR5 290 aa24.17■■□□□ 1.46
CTDSPL-206ENST00000443503 CTNND1O60716 968 aaKnown RBP24.17■■□□□ 1.46
CTDSPL-206ENST00000443503 NMT1P30419 496 aaKnown RBP24.17■■□□□ 1.46
CTDSPL-206ENST00000443503 CNOT8Q9UFF9 292 aaKnown RBP24.17■■□□□ 1.46
CTDSPL-206ENST00000443503 IREB2P48200 963 aaKnown RBP24.17■■□□□ 1.46
CTDSPL-206ENST00000443503 STXBP2Q15833 593 aa24.17■■□□□ 1.46
CTDSPL-206ENST00000443503 AGPAT5Q9NUQ2 364 aa24.17■■□□□ 1.46
CTDSPL-206ENST00000443503 DNAJC17Q9NVM6 304 aaKnown RBP24.17■■□□□ 1.46
CTDSPL-206ENST00000443503 GABBR1Q9UBS5 961 aa24.17■■□□□ 1.46
CTDSPL-206ENST00000443503 PACSIN2Q9UNF0 486 aaPredicted RBP24.17■■□□□ 1.46
CTDSPL-206ENST00000443503 PDS5AQ29RF7 1337 aaKnown RBP24.17■■□□□ 1.46
CTDSPL-206ENST00000443503 ESYT3A0FGR9 886 aa24.17■■□□□ 1.46
CTDSPL-206ENST00000443503 CCDC160A6NGH7 325 aa24.17■■□□□ 1.46
CTDSPL-206ENST00000443503 ATP1A1P05023 1023 aaKnown RBP24.17■■□□□ 1.46
CTDSPL-206ENST00000443503 ZKSCAN8Q15776 578 aaPredicted RBP24.17■■□□□ 1.46
CTDSPL-206ENST00000443503 ALS2CLQ60I27 953 aa24.17■■□□□ 1.46
CTDSPL-206ENST00000443503 C7orf25Q9BPX7 421 aa24.17■■□□□ 1.46
CTDSPL-206ENST00000443503 FAM213AQ9BRX8 229 aa24.17■■□□□ 1.46
CTDSPL-206ENST00000443503 ANAPC7Q9UJX3 599 aa24.17■■□□□ 1.46
CTDSPL-206ENST00000443503 PCK1P35558 622 aa24.16■■□□□ 1.46
CTDSPL-206ENST00000443503 KCNJ6P48051 423 aa24.16■■□□□ 1.46
CTDSPL-206ENST00000443503 NLRP7Q8WX94 980 aa24.16■■□□□ 1.46
CTDSPL-206ENST00000443503 ATP6V0A4Q9HBG4 840 aa24.16■■□□□ 1.46
CTDSPL-206ENST00000443503 ZCCHC17Q9NP64 241 aaKnown RBP24.16■■□□□ 1.46
CTDSPL-206ENST00000443503 SLC12A2P55011 1212 aa24.16■■□□□ 1.46
CTDSPL-206ENST00000443503 ADAM21Q9UKJ8 722 aa24.16■■□□□ 1.46
CTDSPL-206ENST00000443503 SNX24Q9Y343 169 aa24.16■■□□□ 1.46
CTDSPL-206ENST00000443503 EYA4O95677 639 aa24.16■■□□□ 1.46
CTDSPL-206ENST00000443503 GLYCTKQ8IVS8 523 aa24.16■■□□□ 1.46
CTDSPL-206ENST00000443503 HOXC10Q9NYD6 342 aa24.16■■□□□ 1.46
CTDSPL-206ENST00000443503 VAMP7P51809 220 aa24.15■■□□□ 1.46
CTDSPL-206ENST00000443503 RINT1Q6NUQ1 792 aa24.15■■□□□ 1.46
CTDSPL-206ENST00000443503 SWSAP1Q6NVH7 229 aa24.15■■□□□ 1.46
CTDSPL-206ENST00000443503 RAD9BQ6WBX8 426 aa24.15■■□□□ 1.46
CTDSPL-206ENST00000443503 TXNRD3Q86VQ6 643 aa24.15■■□□□ 1.46
CTDSPL-206ENST00000443503 NYAP2Q9P242 653 aa24.15■■□□□ 1.46
CTDSPL-206ENST00000443503 BAZ2BQ9UIF8 2168 aaKnown RBP24.15■■□□□ 1.46
CTDSPL-206ENST00000443503 CLDN3O15551 220 aa24.15■■□□□ 1.46
CTDSPL-206ENST00000443503 TADA3O75528 432 aa24.15■■□□□ 1.46
CTDSPL-206ENST00000443503 MKRN3Q13064 507 aaKnown RBP24.15■■□□□ 1.46
CTDSPL-206ENST00000443503 PDXDC1Q6P996 788 aa24.15■■□□□ 1.46
CTDSPL-206ENST00000443503 EXOC8Q8IYI6 725 aa24.15■■□□□ 1.46
CTDSPL-206ENST00000443503 SAAL1Q96ER3 474 aa24.15■■□□□ 1.46
CTDSPL-206ENST00000443503 ADAM22Q9P0K1 906 aa24.15■■□□□ 1.46
CTDSPL-206ENST00000443503 ODF2LQ9ULJ1 636 aa24.15■■□□□ 1.46
CTDSPL-206ENST00000443503 XPOTO43592 962 aaKnown RBP24.15■■□□□ 1.46
CTDSPL-206ENST00000443503 NR1D1P20393 614 aa24.15■■□□□ 1.46
CTDSPL-206ENST00000443503 HHIPL2Q6UWX4 724 aa24.15■■□□□ 1.46
CTDSPL-206ENST00000443503 SPATS2Q86XZ4 545 aaKnown RBP24.15■■□□□ 1.46
CTDSPL-206ENST00000443503 RPS6KC1Q96S38 1066 aa24.15■■□□□ 1.46
CTDSPL-206ENST00000443503 TBK1Q9UHD2 729 aa24.15■■□□□ 1.46
CTDSPL-206ENST00000443503 ADGRB2O60241 1585 aa24.15■■□□□ 1.46
CTDSPL-206ENST00000443503 ST3GAL1Q11201 340 aa24.15■■□□□ 1.46
CTDSPL-206ENST00000443503 PODXL2Q9NZ53 605 aa24.15■■□□□ 1.46
CTDSPL-206ENST00000443503 ZBTB12Q9Y330 459 aaPredicted RBP24.15■■□□□ 1.46
CTDSPL-206ENST00000443503 SRGNP10124 158 aa24.14■■□□□ 1.46
CTDSPL-206ENST00000443503 EPHA7Q15375 998 aa24.14■■□□□ 1.46
CTDSPL-206ENST00000443503 TERF2Q15554 542 aa24.14■■□□□ 1.46
CTDSPL-206ENST00000443503 CRCPO75575 148 aa24.14■■□□□ 1.46
CTDSPL-206ENST00000443503 OR6B2Q6IFH4 312 aa24.14■■□□□ 1.46
CTDSPL-206ENST00000443503 PPP1R2P3Q6NXS1 205 aa24.14■■□□□ 1.46
CTDSPL-206ENST00000443503 GIMAP8Q8ND71 665 aaPredicted RBP24.14■■□□□ 1.46
CTDSPL-206ENST00000443503 EDEM3Q9BZQ6 932 aa24.14■■□□□ 1.46
CTDSPL-206ENST00000443503 JMJD4Q9H9V9 463 aa24.14■■□□□ 1.46
CTDSPL-206ENST00000443503 PALM3A6NDB9 673 aaPredicted RBP24.14■■□□□ 1.45
CTDSPL-206ENST00000443503 PPP4CP60510 307 aa24.14■■□□□ 1.45
CTDSPL-206ENST00000443503 CUL1Q13616 776 aa24.14■■□□□ 1.45
CTDSPL-206ENST00000443503 DDX47Q9H0S4 455 aaKnown RBP24.14■■□□□ 1.45
CTDSPL-206ENST00000443503 ABL1P00519 1130 aa24.14■■□□□ 1.45
CTDSPL-206ENST00000443503 PDZD4Q76G19 769 aaPredicted RBP24.14■■□□□ 1.45
CTDSPL-206ENST00000443503 ARHGAP24Q8N264 748 aa24.14■■□□□ 1.45
CTDSPL-206ENST00000443503 RPF1Q9H9Y2 349 aaKnown RBP24.14■■□□□ 1.45
CTDSPL-206ENST00000443503 MIF4GDA9UHW6 222 aaKnown RBP24.13■■□□□ 1.45
CTDSPL-206ENST00000443503 LDHAP00338 332 aaKnown RBP24.13■■□□□ 1.45
CTDSPL-206ENST00000443503 INHBAP08476 426 aa24.13■■□□□ 1.45
CTDSPL-206ENST00000443503 GPC5P78333 572 aa24.13■■□□□ 1.45
CTDSPL-206ENST00000443503 EN1Q05925 392 aaPredicted RBP24.13■■□□□ 1.45
CTDSPL-206ENST00000443503 ZNF211Q13398 564 aaPredicted RBP24.13■■□□□ 1.45
CTDSPL-206ENST00000443503 GLE1Q53GS7 698 aaKnown RBP24.13■■□□□ 1.45
CTDSPL-206ENST00000443503 ARMC9Q7Z3E5 817 aa24.13■■□□□ 1.45
CTDSPL-206ENST00000443503 HAUS6Q7Z4H7 955 aa24.13■■□□□ 1.45
CTDSPL-206ENST00000443503 RPUSD2Q8IZ73 545 aaKnown RBP24.13■■□□□ 1.45
CTDSPL-206ENST00000443503 LRRC8CQ8TDW0 803 aa24.13■■□□□ 1.45
CTDSPL-206ENST00000443503 MROH1Q8NDA8 1641 aa24.13■■□□□ 1.45
CTDSPL-206ENST00000443503 PSMC5P62195 406 aa24.13■■□□□ 1.45
CTDSPL-206ENST00000443503 MAP3K14Q99558 947 aa24.13■■□□□ 1.45
CTDSPL-206ENST00000443503 AGXT2Q9BYV1 514 aa24.13■■□□□ 1.45
CTDSPL-206ENST00000443503 RASGRF2O14827 1237 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms