RNA–Protein interactions for RNA: ENST00000442892.2

SLC48A1-202, Transcript of solute carrier family 48 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC48A1, Length 1,024 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-202ENST00000442892 FAM109BQ6ICB4 259 aaPredicted RBP13.63□□□□□ -0.23
SLC48A1-202ENST00000442892 FAM117BQ6P1L5 589 aa13.63□□□□□ -0.23
SLC48A1-202ENST00000442892 CATSPER3Q86XQ3 398 aa13.63□□□□□ -0.23
SLC48A1-202ENST00000442892 NME8Q8N427 588 aa13.63□□□□□ -0.23
SLC48A1-202ENST00000442892 ZNF579Q8NAF0 562 aaKnown RBP13.63□□□□□ -0.23
SLC48A1-202ENST00000442892 RASSF8Q8NHQ8 419 aa13.63□□□□□ -0.23
SLC48A1-202ENST00000442892 SLC7A3Q8WY07 619 aa13.63□□□□□ -0.23
SLC48A1-202ENST00000442892 VWCEQ96DN2 955 aa13.63□□□□□ -0.23
SLC48A1-202ENST00000442892 OSMRQ99650 979 aa13.63□□□□□ -0.23
SLC48A1-202ENST00000442892 CELF4Q9BZC1 486 aaKnown RBP13.63□□□□□ -0.23
SLC48A1-202ENST00000442892 TUFT1Q9NNX1 390 aa13.63□□□□□ -0.23
SLC48A1-202ENST00000442892 DAXXQ9UER7 740 aaPredicted RBP13.63□□□□□ -0.23
SLC48A1-202ENST00000442892 CLIC4Q9Y696 253 aa13.63□□□□□ -0.23
SLC48A1-202ENST00000442892 LAMA3Q16787 3333 aa13.62□□□□□ -0.23
SLC48A1-202ENST00000442892 USO1O60763 962 aaKnown RBP13.62□□□□□ -0.23
SLC48A1-202ENST00000442892 BMP15O95972 392 aa13.62□□□□□ -0.23
SLC48A1-202ENST00000442892 ATP2A2P16615 1042 aaKnown RBP13.62□□□□□ -0.23
SLC48A1-202ENST00000442892 CDC25AP30304 524 aa13.62□□□□□ -0.23
SLC48A1-202ENST00000442892 PRPHP41219 470 aa13.62□□□□□ -0.23
SLC48A1-202ENST00000442892 FXR1P51114 621 aaKnown RBP eCLIP13.62□□□□□ -0.23
SLC48A1-202ENST00000442892 NLRP11P59045 1033 aaKnown RBP13.62□□□□□ -0.23
SLC48A1-202ENST00000442892 NFX1Q12986 1120 aaKnown RBP13.62□□□□□ -0.23
SLC48A1-202ENST00000442892 PAK2Q13177 524 aa13.62□□□□□ -0.23
SLC48A1-202ENST00000442892 DRP2Q13474 957 aa13.62□□□□□ -0.23
SLC48A1-202ENST00000442892 EMC2Q15006 297 aa13.62□□□□□ -0.23
SLC48A1-202ENST00000442892 TARBP2Q15633 366 aaKnown RBP13.62□□□□□ -0.23
SLC48A1-202ENST00000442892 IL17AQ16552 155 aa13.62□□□□□ -0.23
SLC48A1-202ENST00000442892 LRIT3Q3SXY7 679 aa13.62□□□□□ -0.23
SLC48A1-202ENST00000442892 FBXO47Q5MNV8 452 aa13.62□□□□□ -0.23
SLC48A1-202ENST00000442892 TSHZ1Q6ZSZ6 1077 aa13.62□□□□□ -0.23
SLC48A1-202ENST00000442892 MAEAQ7L5Y9 396 aa13.62□□□□□ -0.23
SLC48A1-202ENST00000442892 TMCO2Q7Z6W1 182 aaPredicted RBP13.62□□□□□ -0.23
SLC48A1-202ENST00000442892 RPAINQ86UA6 219 aa13.62□□□□□ -0.23
SLC48A1-202ENST00000442892 RHPN2Q8IUC4 686 aa13.62□□□□□ -0.23
SLC48A1-202ENST00000442892 TMEM143Q96AN5 459 aa13.62□□□□□ -0.23
SLC48A1-202ENST00000442892 CDK5RAP3Q96JB5 506 aa13.62□□□□□ -0.23
SLC48A1-202ENST00000442892 NLRP4Q96MN2 994 aa13.62□□□□□ -0.23
SLC48A1-202ENST00000442892 PLIN2Q99541 437 aa13.62□□□□□ -0.23
SLC48A1-202ENST00000442892 HSD17B14Q9BPX1 270 aa13.62□□□□□ -0.23
SLC48A1-202ENST00000442892 JPH2Q9BR39 696 aaPredicted RBP13.62□□□□□ -0.23
SLC48A1-202ENST00000442892 ZSCAN16Q9H4T2 348 aaPredicted RBP13.62□□□□□ -0.23
SLC48A1-202ENST00000442892 SUCLA2Q9P2R7 463 aaPredicted RBP13.62□□□□□ -0.23
SLC48A1-202ENST00000442892 KIAA1024Q9UPX6 916 aa13.62□□□□□ -0.23
SLC48A1-202ENST00000442892 MYO9BQ13459 2157 aa13.61□□□□□ -0.23
SLC48A1-202ENST00000442892 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.61□□□□□ -0.23
SLC48A1-202ENST00000442892 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.61□□□□□ -0.23
SLC48A1-202ENST00000442892 ARHGEF35A5YM69 484 aa13.61□□□□□ -0.23
SLC48A1-202ENST00000442892 RPS6KA5O75582 802 aa13.61□□□□□ -0.23
SLC48A1-202ENST00000442892 BAIAP3O94812 1187 aa13.61□□□□□ -0.23
SLC48A1-202ENST00000442892 SPATA31C1P0DKV0 1188 aa13.61□□□□□ -0.23
SLC48A1-202ENST00000442892 ZSCAN22P10073 491 aaPredicted RBP13.61□□□□□ -0.23
SLC48A1-202ENST00000442892 MARCKSP29966 332 aaPredicted RBP13.61□□□□□ -0.23
SLC48A1-202ENST00000442892 RFC5P40937 340 aa13.61□□□□□ -0.23
SLC48A1-202ENST00000442892 RABGGTBP53611 331 aa13.61□□□□□ -0.23
SLC48A1-202ENST00000442892 WDR5P61964 334 aaKnown RBP13.61□□□□□ -0.23
SLC48A1-202ENST00000442892 DEFB103AP81534 67 aa13.61□□□□□ -0.23
SLC48A1-202ENST00000442892 PKP1Q13835 747 aa13.61□□□□□ -0.23
SLC48A1-202ENST00000442892 PLEKHG4Q58EX7 1191 aa13.61□□□□□ -0.23
SLC48A1-202ENST00000442892 MYOCDQ8IZQ8 938 aa13.61□□□□□ -0.23
SLC48A1-202ENST00000442892 NACC1Q96RE7 527 aa13.61□□□□□ -0.23
SLC48A1-202ENST00000442892 MTRQ99707 1265 aa13.61□□□□□ -0.23
SLC48A1-202ENST00000442892 ZBED2Q9BTP6 218 aa13.61□□□□□ -0.23
SLC48A1-202ENST00000442892 POLR3CQ9BUI4 534 aaPredicted RBP13.61□□□□□ -0.23
SLC48A1-202ENST00000442892 CDHR5Q9HBB8 845 aa13.61□□□□□ -0.23
SLC48A1-202ENST00000442892 ATP6V0A4Q9HBG4 840 aa13.61□□□□□ -0.23
SLC48A1-202ENST00000442892 DDX19AQ9NUU7 478 aaKnown RBP13.61□□□□□ -0.23
SLC48A1-202ENST00000442892 MYH11P35749 1972 aa13.61□□□□□ -0.23
SLC48A1-202ENST00000442892 MAFO75444 373 aaPredicted RBP13.6□□□□□ -0.23
SLC48A1-202ENST00000442892 UPP2O95045 317 aa13.6□□□□□ -0.23
SLC48A1-202ENST00000442892 F13A1P00488 732 aa13.6□□□□□ -0.23
SLC48A1-202ENST00000442892 AMHP03971 560 aa13.6□□□□□ -0.23
SLC48A1-202ENST00000442892 SSBP05455 408 aaKnown RBP eCLIP13.6□□□□□ -0.23
SLC48A1-202ENST00000442892 RPA1P27694 616 aa13.6□□□□□ -0.23
SLC48A1-202ENST00000442892 GPC3P51654 580 aa13.6□□□□□ -0.23
SLC48A1-202ENST00000442892 CRYBB1P53674 252 aaPredicted RBP13.6□□□□□ -0.23
SLC48A1-202ENST00000442892 PDIA5Q14554 519 aa13.6□□□□□ -0.23
SLC48A1-202ENST00000442892 STK38Q15208 465 aa13.6□□□□□ -0.23
SLC48A1-202ENST00000442892 ECM1Q16610 540 aa13.6□□□□□ -0.23
SLC48A1-202ENST00000442892 KSR1Q8IVT5 923 aa13.6□□□□□ -0.23
SLC48A1-202ENST00000442892 IGSF22Q8N9C0 903 aa13.6□□□□□ -0.23
SLC48A1-202ENST00000442892 APBB2Q92870 758 aa13.6□□□□□ -0.23
SLC48A1-202ENST00000442892 FAM161BQ96MY7 647 aa13.6□□□□□ -0.23
SLC48A1-202ENST00000442892 ZNF396Q96N95 335 aaPredicted RBP13.6□□□□□ -0.23
SLC48A1-202ENST00000442892 SLC9A7Q96T83 725 aa13.6□□□□□ -0.23
SLC48A1-202ENST00000442892 AGO3Q9H9G7 860 aaKnown RBP13.6□□□□□ -0.23
SLC48A1-202ENST00000442892 ANKEF1Q9NU02 776 aa13.6□□□□□ -0.23
SLC48A1-202ENST00000442892 NOC2LQ9Y3T9 749 aaKnown RBP13.6□□□□□ -0.23
SLC48A1-202ENST00000442892 STK24Q9Y6E0 443 aa13.6□□□□□ -0.23
SLC48A1-202ENST00000442892 A0A087WZ62 844 aa13.59□□□□□ -0.23
SLC48A1-202ENST00000442892 ABHD14A-ACY1A0A1B0GW23 586 aa13.59□□□□□ -0.23
SLC48A1-202ENST00000442892 EFCAB14O75071 495 aa13.59□□□□□ -0.23
SLC48A1-202ENST00000442892 GPR32O75388 356 aa13.59□□□□□ -0.23
SLC48A1-202ENST00000442892 LYPLA2O95372 231 aa13.59□□□□□ -0.23
SLC48A1-202ENST00000442892 SRGAP2CP0DJJ0 459 aa13.59□□□□□ -0.23
SLC48A1-202ENST00000442892 FGFR4P22455 802 aa13.59□□□□□ -0.23
SLC48A1-202ENST00000442892 PBX2P40425 430 aa13.59□□□□□ -0.23
SLC48A1-202ENST00000442892 RARRES1P49788 294 aa13.59□□□□□ -0.23
SLC48A1-202ENST00000442892 MKRN4PQ13434 485 aaPredicted RBP13.59□□□□□ -0.23
SLC48A1-202ENST00000442892 RASIP1Q5U651 963 aa13.59□□□□□ -0.23
SLC48A1-202ENST00000442892 ARL6IP4Q66PJ3 421 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms