RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 BMP2KQ9NSY1 1161 aaPredicted RBP17.9■□□□□ 0.46
USP39-205ENST00000442708 RSPH10B2B2RC85 870 aa17.89■□□□□ 0.45
USP39-205ENST00000442708 E9PMD0 336 aa17.89■□□□□ 0.45
USP39-205ENST00000442708 MAFO75444 373 aaPredicted RBP17.89■□□□□ 0.45
USP39-205ENST00000442708 VTNP04004 478 aa17.89■□□□□ 0.45
USP39-205ENST00000442708 RSPH10BP0C881 870 aa17.89■□□□□ 0.45
USP39-205ENST00000442708 ACRP10323 421 aa17.89■□□□□ 0.45
USP39-205ENST00000442708 XRCC6P12956 609 aaKnown RBP eCLIP17.89■□□□□ 0.45
USP39-205ENST00000442708 MUTP22033 750 aa17.89■□□□□ 0.45
USP39-205ENST00000442708 NUCB2P80303 420 aa17.89■□□□□ 0.45
USP39-205ENST00000442708 TCTN1Q2MV58 587 aa17.89■□□□□ 0.45
USP39-205ENST00000442708 ATL3Q6DD88 541 aa17.89■□□□□ 0.45
USP39-205ENST00000442708 CHRDL2Q6WN34 429 aa17.89■□□□□ 0.45
USP39-205ENST00000442708 CABP7Q86V35 215 aa17.89■□□□□ 0.45
USP39-205ENST00000442708 TMEM199Q8N511 208 aa17.89■□□□□ 0.45
USP39-205ENST00000442708 KRI1Q8N9T8 703 aaKnown RBP17.89■□□□□ 0.45
USP39-205ENST00000442708 NACC1Q96RE7 527 aa17.89■□□□□ 0.45
USP39-205ENST00000442708 PPP1R16BQ96T49 567 aa17.89■□□□□ 0.45
USP39-205ENST00000442708 SUGCTQ9HAC7 445 aa17.89■□□□□ 0.45
USP39-205ENST00000442708 XPNPEP1Q9NQW7 623 aa17.89■□□□□ 0.45
USP39-205ENST00000442708 DBR1Q9UK59 544 aaKnown RBP17.89■□□□□ 0.45
USP39-205ENST00000442708 RCOR1Q9UKL0 485 aa17.89■□□□□ 0.45
USP39-205ENST00000442708 STK24Q9Y6E0 443 aa17.89■□□□□ 0.45
USP39-205ENST00000442708 CAND2O75155 1236 aa17.88■□□□□ 0.45
USP39-205ENST00000442708 PPP6R2O75170 966 aa17.88■□□□□ 0.45
USP39-205ENST00000442708 MRPS6P82932 125 aaKnown RBP17.88■□□□□ 0.45
USP39-205ENST00000442708 KARSQ15046 597 aaKnown RBP17.88■□□□□ 0.45
USP39-205ENST00000442708 ZRSR1Q15695 479 aaKnown RBP17.88■□□□□ 0.45
USP39-205ENST00000442708 TMEM119Q4V9L6 283 aa17.88■□□□□ 0.45
USP39-205ENST00000442708 AXDND1Q5T1B0 1012 aaPredicted RBP17.88■□□□□ 0.45
USP39-205ENST00000442708 DEFB128Q7Z7B8 93 aa17.88■□□□□ 0.45
USP39-205ENST00000442708 SYMPKQ92797 1274 aaKnown RBP17.88■□□□□ 0.45
USP39-205ENST00000442708 CDY2AQ9Y6F7 541 aa17.88■□□□□ 0.45
USP39-205ENST00000442708 NCLP19338 710 aaKnown RBP17.87■□□□□ 0.45
USP39-205ENST00000442708 RFC5P40937 340 aa17.87■□□□□ 0.45
USP39-205ENST00000442708 EMC2Q15006 297 aa17.87■□□□□ 0.45
USP39-205ENST00000442708 RSPH3Q86UC2 560 aa17.87■□□□□ 0.45
USP39-205ENST00000442708 NME8Q8N427 588 aa17.87■□□□□ 0.45
USP39-205ENST00000442708 TMEM143Q96AN5 459 aa17.87■□□□□ 0.45
USP39-205ENST00000442708 ZNF668Q96K58 619 aaPredicted RBP17.87■□□□□ 0.45
USP39-205ENST00000442708 CCSER1Q9C0I3 900 aa17.87■□□□□ 0.45
USP39-205ENST00000442708 IL23AQ9NPF7 189 aa17.87■□□□□ 0.45
USP39-205ENST00000442708 CFAP45Q9UL16 551 aa17.87■□□□□ 0.45
USP39-205ENST00000442708 PCDHA7Q9UN72 937 aa17.87■□□□□ 0.45
USP39-205ENST00000442708 PPME1Q9Y570 386 aa17.87■□□□□ 0.45
USP39-205ENST00000442708 RANBP2P49792 3224 aaKnown RBP17.87■□□□□ 0.45
USP39-205ENST00000442708 A0A087X0B3 334 aa17.86■□□□□ 0.45
USP39-205ENST00000442708 USO1O60763 962 aaKnown RBP17.86■□□□□ 0.45
USP39-205ENST00000442708 GPR32O75388 356 aa17.86■□□□□ 0.45
USP39-205ENST00000442708 EYA4O95677 639 aa17.86■□□□□ 0.45
USP39-205ENST00000442708 CXCL10P02778 98 aa17.86■□□□□ 0.45
USP39-205ENST00000442708 BMP8BP34820 402 aa17.86■□□□□ 0.45
USP39-205ENST00000442708 UBA7P41226 1012 aa17.86■□□□□ 0.45
USP39-205ENST00000442708 FXR1P51114 621 aaKnown RBP eCLIP17.86■□□□□ 0.45
USP39-205ENST00000442708 POLGP54098 1239 aaPredicted RBP17.86■□□□□ 0.45
USP39-205ENST00000442708 PPIGQ13427 754 aaKnown RBP eCLIP17.86■□□□□ 0.456e-7■■■□□ 16
USP39-205ENST00000442708 TMEM240Q5SV17 173 aa17.86■□□□□ 0.45
USP39-205ENST00000442708 C9orf50Q5SZB4 431 aa17.86■□□□□ 0.45
USP39-205ENST00000442708 LEO1Q8WVC0 666 aaPredicted RBP17.86■□□□□ 0.45
USP39-205ENST00000442708 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.86■□□□□ 0.453e-12■■□□□ 13.5
USP39-205ENST00000442708 CELF4Q9BZC1 486 aaKnown RBP17.86■□□□□ 0.45
USP39-205ENST00000442708 UBE2OQ9C0C9 1292 aaKnown RBP17.86■□□□□ 0.45
USP39-205ENST00000442708 BHMT2Q9H2M3 363 aa17.86■□□□□ 0.45
USP39-205ENST00000442708 ADAMTS10Q9H324 1103 aa17.86■□□□□ 0.45
USP39-205ENST00000442708 CIZ1Q9ULV3 898 aaPredicted RBP17.86■□□□□ 0.45
USP39-205ENST00000442708 COLQQ9Y215 455 aaPredicted RBP17.86■□□□□ 0.45
USP39-205ENST00000442708 AKT3Q9Y243 479 aa17.86■□□□□ 0.45
USP39-205ENST00000442708 TRPV2Q9Y5S1 764 aa17.86■□□□□ 0.45
USP39-205ENST00000442708 KDM3AQ9Y4C1 1321 aa17.86■□□□□ 0.45
USP39-205ENST00000442708 CUTAO60888 179 aa17.85■□□□□ 0.45
USP39-205ENST00000442708 PLCG1P19174 1290 aa17.85■□□□□ 0.45
USP39-205ENST00000442708 TMOD1P28289 359 aa17.85■□□□□ 0.45
USP39-205ENST00000442708 RFC2P35250 354 aa17.85■□□□□ 0.45
USP39-205ENST00000442708 KRT85P78386 507 aa17.85■□□□□ 0.45
USP39-205ENST00000442708 LPIN1Q14693 890 aa17.85■□□□□ 0.45
USP39-205ENST00000442708 SHHQ15465 462 aa17.85■□□□□ 0.45
USP39-205ENST00000442708 KIZQ2M2Z5 673 aa17.85■□□□□ 0.45
USP39-205ENST00000442708 IER5Q5VY09 327 aa17.85■□□□□ 0.45
USP39-205ENST00000442708 SHC4Q6S5L8 630 aa17.85■□□□□ 0.45
USP39-205ENST00000442708 PADI6Q6TGC4 694 aa17.85■□□□□ 0.45
USP39-205ENST00000442708 ZNF365Q70YC5 407 aa17.85■□□□□ 0.45
USP39-205ENST00000442708 KSR1Q8IVT5 923 aa17.85■□□□□ 0.45
USP39-205ENST00000442708 KCNG4Q8TDN1 519 aa17.85■□□□□ 0.45
USP39-205ENST00000442708 TMEM40Q8WWA1 233 aa17.85■□□□□ 0.45
USP39-205ENST00000442708 SLC7A3Q8WY07 619 aa17.85■□□□□ 0.45
USP39-205ENST00000442708 BLOC1S4Q9NUP1 217 aa17.85■□□□□ 0.45
USP39-205ENST00000442708 SUCLA2Q9P2R7 463 aaPredicted RBP17.85■□□□□ 0.45
USP39-205ENST00000442708 DNM3Q9UQ16 869 aa17.85■□□□□ 0.45
USP39-205ENST00000442708 ATP6V1DQ9Y5K8 247 aa17.85■□□□□ 0.45
USP39-205ENST00000442708 ARHGEF35A5YM69 484 aa17.84■□□□□ 0.45
USP39-205ENST00000442708 SLC26A4O43511 780 aa17.84■□□□□ 0.45
USP39-205ENST00000442708 DGAT1O75907 488 aa17.84■□□□□ 0.45
USP39-205ENST00000442708 GHRP10912 638 aa17.84■□□□□ 0.45
USP39-205ENST00000442708 NLRP11P59045 1033 aaKnown RBP17.84■□□□□ 0.45
USP39-205ENST00000442708 FBXO47Q5MNV8 452 aa17.84■□□□□ 0.45
USP39-205ENST00000442708 PRPF31Q8WWY3 499 aaKnown RBP17.84■□□□□ 0.45
USP39-205ENST00000442708 SPATA32Q96LK8 384 aa17.84■□□□□ 0.45
USP39-205ENST00000442708 IPO9Q96P70 1041 aaKnown RBP17.84■□□□□ 0.45
USP39-205ENST00000442708 MTRQ99707 1265 aa17.84■□□□□ 0.45
USP39-205ENST00000442708 NT5C3AQ9H0P0 336 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms