RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 ZRSR1Q15695 479 aaKnown RBP13.76□□□□□ -0.21
USP1-203ENST00000442679 TMEM240Q5SV17 173 aa13.76□□□□□ -0.21
USP1-203ENST00000442679 C9orf50Q5SZB4 431 aa13.76□□□□□ -0.21
USP1-203ENST00000442679 ATL3Q6DD88 541 aa13.76□□□□□ -0.21
USP1-203ENST00000442679 PSRC1Q6PGN9 363 aaPredicted RBP13.76□□□□□ -0.21
USP1-203ENST00000442679 LINC01465Q8N7H1 131 aa13.76□□□□□ -0.21
USP1-203ENST00000442679 SLC7A3Q8WY07 619 aa13.76□□□□□ -0.21
USP1-203ENST00000442679 VWCEQ96DN2 955 aa13.76□□□□□ -0.21
USP1-203ENST00000442679 MAP7D2Q96T17 732 aa13.76□□□□□ -0.21
USP1-203ENST00000442679 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.76□□□□□ -0.215e-6■■■□□ 16.3
USP1-203ENST00000442679 MMTAG2Q9BU76 263 aaKnown RBP13.76□□□□□ -0.21
USP1-203ENST00000442679 CELF4Q9BZC1 486 aaKnown RBP13.76□□□□□ -0.21
USP1-203ENST00000442679 DDX19AQ9NUU7 478 aaKnown RBP13.76□□□□□ -0.21
USP1-203ENST00000442679 DBR1Q9UK59 544 aaKnown RBP13.76□□□□□ -0.21
USP1-203ENST00000442679 AKT3Q9Y243 479 aa13.76□□□□□ -0.21
USP1-203ENST00000442679 SRPRBQ9Y5M8 271 aaKnown RBP13.76□□□□□ -0.21
USP1-203ENST00000442679 LTBP2Q14767 1821 aa13.76□□□□□ -0.21
USP1-203ENST00000442679 CXCL10P02778 98 aa13.75□□□□□ -0.21
USP1-203ENST00000442679 VTNP04004 478 aa13.75□□□□□ -0.21
USP1-203ENST00000442679 UBA7P41226 1012 aa13.75□□□□□ -0.21
USP1-203ENST00000442679 MKRN4PQ13434 485 aaPredicted RBP13.75□□□□□ -0.21
USP1-203ENST00000442679 CABP7Q86V35 215 aa13.75□□□□□ -0.21
USP1-203ENST00000442679 TDHQ8IZJ6 230 aa13.75□□□□□ -0.21
USP1-203ENST00000442679 LINC00301Q8NCQ3 95 aa13.75□□□□□ -0.21
USP1-203ENST00000442679 CSRNP2Q9H175 543 aa13.75□□□□□ -0.21
USP1-203ENST00000442679 DHX33Q9H6R0 707 aaKnown RBP13.75□□□□□ -0.21
USP1-203ENST00000442679 SUCLA2Q9P2R7 463 aaPredicted RBP13.75□□□□□ -0.21
USP1-203ENST00000442679 FBXO2Q9UK22 296 aaPredicted RBP13.75□□□□□ -0.21
USP1-203ENST00000442679 CFAP45Q9UL16 551 aa13.75□□□□□ -0.21
USP1-203ENST00000442679 DNM3Q9UQ16 869 aa13.75□□□□□ -0.21
USP1-203ENST00000442679 TRPV2Q9Y5S1 764 aa13.75□□□□□ -0.21
USP1-203ENST00000442679 MORC2Q9Y6X9 1032 aaPredicted RBP13.75□□□□□ -0.21
USP1-203ENST00000442679 A0A1W2PPC1 479 aa13.74□□□□□ -0.21
USP1-203ENST00000442679 RBAK-RBAKDNI3L0D1 243 aa13.74□□□□□ -0.21
USP1-203ENST00000442679 SPTLC2O15270 562 aa13.74□□□□□ -0.21
USP1-203ENST00000442679 YEATS4O95619 227 aa13.74□□□□□ -0.21
USP1-203ENST00000442679 ACTN1P12814 892 aa13.74□□□□□ -0.21
USP1-203ENST00000442679 RARRES1P49788 294 aa13.74□□□□□ -0.21
USP1-203ENST00000442679 NUCB2P80303 420 aa13.74□□□□□ -0.21
USP1-203ENST00000442679 DNM1Q05193 864 aaKnown RBP13.74□□□□□ -0.21
USP1-203ENST00000442679 DRP2Q13474 957 aa13.74□□□□□ -0.21
USP1-203ENST00000442679 LPIN1Q14693 890 aa13.74□□□□□ -0.21
USP1-203ENST00000442679 KIZQ2M2Z5 673 aa13.74□□□□□ -0.21
USP1-203ENST00000442679 OTOP2Q7RTS6 562 aa13.74□□□□□ -0.21
USP1-203ENST00000442679 KRI1Q8N9T8 703 aaKnown RBP13.74□□□□□ -0.21
USP1-203ENST00000442679 CDK5RAP3Q96JB5 506 aa13.74□□□□□ -0.21
USP1-203ENST00000442679 CLIC6Q96NY7 704 aa13.74□□□□□ -0.21
USP1-203ENST00000442679 PPP1R16BQ96T49 567 aa13.74□□□□□ -0.21
USP1-203ENST00000442679 OSBPL7Q9BZF2 842 aa13.74□□□□□ -0.21
USP1-203ENST00000442679 CDHR5Q9HBB8 845 aa13.74□□□□□ -0.21
USP1-203ENST00000442679 BMP2KQ9NSY1 1161 aaPredicted RBP13.74□□□□□ -0.21
USP1-203ENST00000442679 GINS2Q9Y248 185 aa13.74□□□□□ -0.21
USP1-203ENST00000442679 ATP6V1DQ9Y5K8 247 aa13.74□□□□□ -0.21
USP1-203ENST00000442679 TRIP12Q14669 1992 aaPredicted RBP13.74□□□□□ -0.21
USP1-203ENST00000442679 KDM3AQ9Y4C1 1321 aa13.73□□□□□ -0.21
USP1-203ENST00000442679 MYH9P35579 1960 aaKnown RBP13.73□□□□□ -0.21
USP1-203ENST00000442679 ARHGEF35A5YM69 484 aa13.73□□□□□ -0.21
USP1-203ENST00000442679 E9PMD0 336 aa13.73□□□□□ -0.21
USP1-203ENST00000442679 SLC26A4O43511 780 aa13.73□□□□□ -0.21
USP1-203ENST00000442679 GAS2O43903 313 aaKnown RBP13.73□□□□□ -0.21
USP1-203ENST00000442679 GPR32O75388 356 aa13.73□□□□□ -0.21
USP1-203ENST00000442679 DGAT1O75907 488 aa13.73□□□□□ -0.21
USP1-203ENST00000442679 GHRP10912 638 aa13.73□□□□□ -0.21
USP1-203ENST00000442679 DDIT3P35638 169 aa13.73□□□□□ -0.21
USP1-203ENST00000442679 CRYBB1P53674 252 aaPredicted RBP13.73□□□□□ -0.21
USP1-203ENST00000442679 NLRP11P59045 1033 aaKnown RBP13.73□□□□□ -0.21
USP1-203ENST00000442679 CDC42EP1Q00587 391 aa13.73□□□□□ -0.21
USP1-203ENST00000442679 GRB10Q13322 594 aa13.73□□□□□ -0.21
USP1-203ENST00000442679 EMC2Q15006 297 aa13.73□□□□□ -0.21
USP1-203ENST00000442679 SPECC1Q5M775 1068 aa13.73□□□□□ -0.21
USP1-203ENST00000442679 FBXO47Q5MNV8 452 aa13.73□□□□□ -0.21
USP1-203ENST00000442679 HYIQ5T013 277 aa13.73□□□□□ -0.21
USP1-203ENST00000442679 CNKSR3Q6P9H4 555 aa13.73□□□□□ -0.21
USP1-203ENST00000442679 ZNF710Q8N1W2 664 aa13.73□□□□□ -0.21
USP1-203ENST00000442679 DBF4BQ8NFT6 615 aa13.73□□□□□ -0.21
USP1-203ENST00000442679 HERVK_113Q902F9 699 aa13.73□□□□□ -0.21
USP1-203ENST00000442679 SEPT8Q92599 483 aa13.73□□□□□ -0.21
USP1-203ENST00000442679 TMEM143Q96AN5 459 aa13.73□□□□□ -0.21
USP1-203ENST00000442679 CALML4Q96GE6 196 aa13.73□□□□□ -0.21
USP1-203ENST00000442679 RNPC3Q96LT9 517 aaKnown RBP13.73□□□□□ -0.21
USP1-203ENST00000442679 PNMA5Q96PV4 448 aa13.73□□□□□ -0.21
USP1-203ENST00000442679 PLIN2Q99541 437 aa13.73□□□□□ -0.21
USP1-203ENST00000442679 MTRQ99707 1265 aa13.73□□□□□ -0.21
USP1-203ENST00000442679 NT5C3AQ9H0P0 336 aa13.73□□□□□ -0.21
USP1-203ENST00000442679 BHMT2Q9H2M3 363 aa13.73□□□□□ -0.21
USP1-203ENST00000442679 ADAMTS10Q9H324 1103 aa13.73□□□□□ -0.21
USP1-203ENST00000442679 ATP6V0A4Q9HBG4 840 aa13.73□□□□□ -0.21
USP1-203ENST00000442679 RANBP2P49792 3224 aaKnown RBP13.72□□□□□ -0.21
USP1-203ENST00000442679 ZBBXA8MT70 800 aa13.72□□□□□ -0.21
USP1-203ENST00000442679 USO1O60763 962 aaKnown RBP13.72□□□□□ -0.21
USP1-203ENST00000442679 PPP6R2O75170 966 aa13.72□□□□□ -0.21
USP1-203ENST00000442679 EYA4O95677 639 aa13.72□□□□□ -0.21
USP1-203ENST00000442679 NCLP19338 710 aaKnown RBP13.72□□□□□ -0.21
USP1-203ENST00000442679 GPC3P51654 580 aa13.72□□□□□ -0.21
USP1-203ENST00000442679 IKBKEQ14164 716 aa13.72□□□□□ -0.21
USP1-203ENST00000442679 TCTN1Q2MV58 587 aa13.72□□□□□ -0.21
USP1-203ENST00000442679 PLEKHG4Q58EX7 1191 aa13.72□□□□□ -0.21
USP1-203ENST00000442679 PADI6Q6TGC4 694 aa13.72□□□□□ -0.21
USP1-203ENST00000442679 TSHZ1Q6ZSZ6 1077 aa13.72□□□□□ -0.21
USP1-203ENST00000442679 USP49Q70CQ1 688 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms