RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 SLC24A5Q71RS6 500 aa13.29□□□□□ -0.28
TTC28-203ENST00000442232 RTN4RL1Q86UN2 441 aaPredicted RBP13.29□□□□□ -0.28
TTC28-203ENST00000442232 FAM178BQ8IXR5 827 aa13.29□□□□□ -0.28
TTC28-203ENST00000442232 BLIDQ8IZY5 108 aa13.29□□□□□ -0.28
TTC28-203ENST00000442232 TBCKQ8TEA7 893 aa13.29□□□□□ -0.28
TTC28-203ENST00000442232 ZNF274Q96GC6 653 aaPredicted RBP13.29□□□□□ -0.28
TTC28-203ENST00000442232 TM6SF1Q9BZW5 370 aa13.29□□□□□ -0.28
TTC28-203ENST00000442232 TMX1Q9H3N1 280 aa13.29□□□□□ -0.28
TTC28-203ENST00000442232 IGFLR1Q9H665 355 aa13.29□□□□□ -0.28
TTC28-203ENST00000442232 ATP6V0A4Q9HBG4 840 aa13.29□□□□□ -0.28
TTC28-203ENST00000442232 RGS18Q9NS28 235 aa13.29□□□□□ -0.28
TTC28-203ENST00000442232 ST3GAL5Q9UNP4 418 aa13.29□□□□□ -0.28
TTC28-203ENST00000442232 PLXNA4Q9HCM2 1894 aa13.28□□□□□ -0.28
TTC28-203ENST00000442232 TBKBP1A7MCY6 615 aa13.28□□□□□ -0.28
TTC28-203ENST00000442232 ADAMTS3O15072 1205 aa13.28□□□□□ -0.28
TTC28-203ENST00000442232 HOXA2O43364 376 aa13.28□□□□□ -0.28
TTC28-203ENST00000442232 LINC00271P0C7V0 271 aa13.28□□□□□ -0.28
TTC28-203ENST00000442232 ZSCAN20P17040 1043 aaPredicted RBP13.28□□□□□ -0.28
TTC28-203ENST00000442232 XBP1P17861 261 aa13.28□□□□□ -0.28
TTC28-203ENST00000442232 NDUFV1P49821 464 aa13.28□□□□□ -0.28
TTC28-203ENST00000442232 TBC1D8BQ0IIM8 1120 aa13.28□□□□□ -0.28
TTC28-203ENST00000442232 CSPP1Q1MSJ5 1256 aa13.28□□□□□ -0.28
TTC28-203ENST00000442232 GALNT17Q6IS24 598 aa13.28□□□□□ -0.28
TTC28-203ENST00000442232 EFCAB12Q6NXP0 572 aa13.28□□□□□ -0.28
TTC28-203ENST00000442232 MIER3Q7Z3K6 550 aa13.28□□□□□ -0.28
TTC28-203ENST00000442232 FAM228AQ86W67 206 aa13.28□□□□□ -0.28
TTC28-203ENST00000442232 KLHL23Q8NBE8 558 aa13.28□□□□□ -0.28
TTC28-203ENST00000442232 RDM1Q8NG50 284 aa13.28□□□□□ -0.28
TTC28-203ENST00000442232 SLC5A5Q92911 643 aa13.28□□□□□ -0.28
TTC28-203ENST00000442232 LENG9Q96B70 501 aa13.28□□□□□ -0.28
TTC28-203ENST00000442232 POP1Q99575 1024 aaKnown RBP13.28□□□□□ -0.28
TTC28-203ENST00000442232 UPF3BQ9BZI7 483 aaKnown RBP13.28□□□□□ -0.28
TTC28-203ENST00000442232 CDHR5Q9HBB8 845 aa13.28□□□□□ -0.28
TTC28-203ENST00000442232 PDRG1Q9NUG6 133 aa13.28□□□□□ -0.28
TTC28-203ENST00000442232 PRKAG3Q9UGI9 489 aa13.28□□□□□ -0.28
TTC28-203ENST00000442232 PLAGL2Q9UPG8 496 aa13.28□□□□□ -0.28
TTC28-203ENST00000442232 HCN4Q9Y3Q4 1203 aa13.28□□□□□ -0.28
TTC28-203ENST00000442232 FSD2A1L4K1 749 aa13.27□□□□□ -0.29
TTC28-203ENST00000442232 MGEA5O60502 916 aa13.27□□□□□ -0.29
TTC28-203ENST00000442232 ITGB1P05556 798 aa13.27□□□□□ -0.29
TTC28-203ENST00000442232 GATMP50440 423 aa13.27□□□□□ -0.29
TTC28-203ENST00000442232 NLRP11P59045 1033 aaKnown RBP13.27□□□□□ -0.29
TTC28-203ENST00000442232 HYAL1Q12794 435 aa13.27□□□□□ -0.29
TTC28-203ENST00000442232 COL19A1Q14993 1142 aa13.27□□□□□ -0.29
TTC28-203ENST00000442232 NONOQ15233 471 aaKnown RBP eCLIP13.27□□□□□ -0.29
TTC28-203ENST00000442232 CLUL1Q15846 466 aa13.27□□□□□ -0.29
TTC28-203ENST00000442232 Q4G0T1 1027 aa13.27□□□□□ -0.29
TTC28-203ENST00000442232 KRT25Q7Z3Z0 450 aa13.27□□□□□ -0.29
TTC28-203ENST00000442232 THNSL1Q8IYQ7 743 aa13.27□□□□□ -0.29
TTC28-203ENST00000442232 ABI1Q8IZP0 508 aa13.27□□□□□ -0.29
TTC28-203ENST00000442232 DAGLBQ8NCG7 672 aa13.27□□□□□ -0.29
TTC28-203ENST00000442232 POF1BQ8WVV4 589 aa13.27□□□□□ -0.29
TTC28-203ENST00000442232 TMEM40Q8WWA1 233 aa13.27□□□□□ -0.29
TTC28-203ENST00000442232 NLRP7Q8WX94 980 aa13.27□□□□□ -0.29
TTC28-203ENST00000442232 UNC45AQ9H3U1 944 aa13.27□□□□□ -0.29
TTC28-203ENST00000442232 EPHX3Q9H6B9 360 aa13.27□□□□□ -0.29
TTC28-203ENST00000442232 TMEM161AQ9NX61 479 aa13.27□□□□□ -0.29
TTC28-203ENST00000442232 SEPT9Q9UHD8 586 aaPredicted RBP13.27□□□□□ -0.29
TTC28-203ENST00000442232 CCDC194A0A1B0GVG4 234 aa13.26□□□□□ -0.29
TTC28-203ENST00000442232 C9IYK1 514 aa13.26□□□□□ -0.29
TTC28-203ENST00000442232 GPR32O75388 356 aa13.26□□□□□ -0.29
TTC28-203ENST00000442232 ALADP13716 330 aa13.26□□□□□ -0.29
TTC28-203ENST00000442232 LAG3P18627 525 aa13.26□□□□□ -0.29
TTC28-203ENST00000442232 DNM2P50570 870 aa13.26□□□□□ -0.29
TTC28-203ENST00000442232 UBE3AQ05086 875 aa13.26□□□□□ -0.29
TTC28-203ENST00000442232 CRIPAKQ8N1N5 446 aa13.26□□□□□ -0.29
TTC28-203ENST00000442232 LRRC71Q8N4P6 559 aa13.26□□□□□ -0.29
TTC28-203ENST00000442232 SPPL3Q8TCT6 385 aa13.26□□□□□ -0.29
TTC28-203ENST00000442232 MICAL1Q8TDZ2 1067 aa13.26□□□□□ -0.29
TTC28-203ENST00000442232 ELAC1Q9H777 363 aaKnown RBP13.26□□□□□ -0.29
TTC28-203ENST00000442232 DDX25Q9UHL0 483 aaKnown RBP13.26□□□□□ -0.29
TTC28-203ENST00000442232 CD207Q9UJ71 328 aa13.26□□□□□ -0.29
TTC28-203ENST00000442232 PI4K2BG5E9Z4 385 aa13.25□□□□□ -0.29
TTC28-203ENST00000442232 ZNF862O60290 1169 aa13.25□□□□□ -0.29
TTC28-203ENST00000442232 MARCH6O60337 910 aa13.25□□□□□ -0.29
TTC28-203ENST00000442232 TDP2O95551 362 aa13.25□□□□□ -0.29
TTC28-203ENST00000442232 SRGAP2BP0DMP2 458 aa13.25□□□□□ -0.29
TTC28-203ENST00000442232 CDC42EP1Q00587 391 aa13.25□□□□□ -0.29
TTC28-203ENST00000442232 SMAD4Q13485 552 aaKnown RBP13.25□□□□□ -0.29
TTC28-203ENST00000442232 MTERF2Q49AM1 385 aa13.25□□□□□ -0.29
TTC28-203ENST00000442232 XKR3Q5GH77 459 aa13.25□□□□□ -0.29
TTC28-203ENST00000442232 MOXD1Q6UVY6 613 aa13.25□□□□□ -0.29
TTC28-203ENST00000442232 ADHFE1Q8IWW8 467 aa13.25□□□□□ -0.29
TTC28-203ENST00000442232 COLGALT1Q8NBJ5 622 aa13.25□□□□□ -0.29
TTC28-203ENST00000442232 RNF169Q8NCN4 708 aa13.25□□□□□ -0.29
TTC28-203ENST00000442232 NAP1L4Q99733 375 aaKnown RBP13.25□□□□□ -0.29
TTC28-203ENST00000442232 JPH2Q9BR39 696 aaPredicted RBP13.25□□□□□ -0.29
TTC28-203ENST00000442232 LARP6Q9BRS8 491 aaKnown RBP13.25□□□□□ -0.29
TTC28-203ENST00000442232 TMEM117Q9H0C3 514 aa13.25□□□□□ -0.29
TTC28-203ENST00000442232 SLKQ9H2G2 1235 aaPredicted RBP13.25□□□□□ -0.29
TTC28-203ENST00000442232 TLR9Q9NR96 1032 aa13.25□□□□□ -0.29
TTC28-203ENST00000442232 STK36Q9NRP7 1315 aa13.24□□□□□ -0.29
TTC28-203ENST00000442232 CYP3A7-CYP3A51PA0A087WV96 503 aa13.24□□□□□ -0.29
TTC28-203ENST00000442232 DKC1O60832 514 aaKnown RBP eCLIP13.24□□□□□ -0.29
TTC28-203ENST00000442232 GPR37L1O60883 481 aa13.24□□□□□ -0.29
TTC28-203ENST00000442232 PSMD10O75832 226 aa13.24□□□□□ -0.29
TTC28-203ENST00000442232 FGFR1P11362 822 aa13.24□□□□□ -0.29
TTC28-203ENST00000442232 EIF4BP23588 611 aaKnown RBP13.24□□□□□ -0.29
TTC28-203ENST00000442232 CYP3A7P24462 503 aa13.24□□□□□ -0.29
TTC28-203ENST00000442232 PPM1AP35813 382 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms