RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 MICALL1Q8N3F8 863 aa17.98■□□□□ 0.47
SEMA3B-207ENST00000441915 GJD4Q96KN9 370 aaPredicted RBP17.98■□□□□ 0.47
SEMA3B-207ENST00000441915 SAMM50Q9Y512 469 aa17.98■□□□□ 0.47
SEMA3B-207ENST00000441915 EP400Q96L91 3159 aa17.97■□□□□ 0.47
SEMA3B-207ENST00000441915 TGFB1I1O43294 461 aa17.97■□□□□ 0.47
SEMA3B-207ENST00000441915 GFPT2O94808 682 aa17.97■□□□□ 0.47
SEMA3B-207ENST00000441915 FAM13AO94988 1023 aa17.97■□□□□ 0.47
SEMA3B-207ENST00000441915 NDUFB10O96000 172 aa17.97■□□□□ 0.47
SEMA3B-207ENST00000441915 ECHS1P30084 290 aa17.97■□□□□ 0.47
SEMA3B-207ENST00000441915 LSP1P33241 339 aa17.97■□□□□ 0.47
SEMA3B-207ENST00000441915 NPEPPSP55786 919 aa17.97■□□□□ 0.47
SEMA3B-207ENST00000441915 FAM186BQ8IYM0 893 aa17.97■□□□□ 0.47
SEMA3B-207ENST00000441915 U2AF1L4Q8WU68 220 aaKnown RBP17.97■□□□□ 0.47
SEMA3B-207ENST00000441915 MYCBPQ99417 103 aaPredicted RBP17.97■□□□□ 0.47
SEMA3B-207ENST00000441915 NCAPGQ9BPX3 1015 aa17.97■□□□□ 0.47
SEMA3B-207ENST00000441915 IDI2Q9BXS1 227 aa17.97■□□□□ 0.47
SEMA3B-207ENST00000441915 DDX47Q9H0S4 455 aaKnown RBP17.97■□□□□ 0.47
SEMA3B-207ENST00000441915 BCAS3Q9H6U6 928 aa17.97■□□□□ 0.47
SEMA3B-207ENST00000441915 EML1O00423 815 aa17.97■□□□□ 0.47
SEMA3B-207ENST00000441915 EIF3DO15371 548 aaKnown RBP eCLIP17.97■□□□□ 0.47
SEMA3B-207ENST00000441915 CPP00450 1065 aa17.97■□□□□ 0.47
SEMA3B-207ENST00000441915 GUCY1A3Q02108 690 aa17.97■□□□□ 0.47
SEMA3B-207ENST00000441915 ABCB5Q2M3G0 1257 aa17.97■□□□□ 0.47
SEMA3B-207ENST00000441915 SLC27A3Q5K4L6 730 aa17.97■□□□□ 0.47
SEMA3B-207ENST00000441915 LRIG3Q6UXM1 1119 aa17.97■□□□□ 0.47
SEMA3B-207ENST00000441915 PODNQ7Z5L7 613 aa17.97■□□□□ 0.47
SEMA3B-207ENST00000441915 MYCT1Q8N699 235 aa17.97■□□□□ 0.47
SEMA3B-207ENST00000441915 PIGOQ8TEQ8 1089 aa17.97■□□□□ 0.47
SEMA3B-207ENST00000441915 FAM198AQ9UFP1 575 aa17.97■□□□□ 0.47
SEMA3B-207ENST00000441915 EVI5O60447 810 aa17.96■□□□□ 0.47
SEMA3B-207ENST00000441915 GDF11O95390 407 aa17.96■□□□□ 0.47
SEMA3B-207ENST00000441915 CYP3A4P08684 503 aa17.96■□□□□ 0.47
SEMA3B-207ENST00000441915 ZBTB48P10074 688 aaPredicted RBP17.96■□□□□ 0.47
SEMA3B-207ENST00000441915 BMP3P12645 472 aa17.96■□□□□ 0.47
SEMA3B-207ENST00000441915 NPR1P16066 1061 aa17.96■□□□□ 0.47
SEMA3B-207ENST00000441915 ALDH1B1P30837 517 aa17.96■□□□□ 0.47
SEMA3B-207ENST00000441915 HSD17B3P37058 310 aa17.96■□□□□ 0.47
SEMA3B-207ENST00000441915 RASGEF1CQ8N431 466 aa17.96■□□□□ 0.47
SEMA3B-207ENST00000441915 EPN3Q9H201 632 aa17.96■□□□□ 0.47
SEMA3B-207ENST00000441915 PCDHAC2Q9Y5I4 1007 aa17.96■□□□□ 0.47
SEMA3B-207ENST00000441915 GCOM1H8Y6P7 765 aaPredicted RBP17.96■□□□□ 0.47
SEMA3B-207ENST00000441915 PPP1R37O75864 691 aa17.96■□□□□ 0.47
SEMA3B-207ENST00000441915 MYZAPP0CAP1 466 aa17.96■□□□□ 0.47
SEMA3B-207ENST00000441915 SLC15A2Q16348 729 aa17.96■□□□□ 0.47
SEMA3B-207ENST00000441915 NT5DC3Q86UY8 548 aa17.96■□□□□ 0.47
SEMA3B-207ENST00000441915 CCDC26Q8TAB7 109 aa17.96■□□□□ 0.47
SEMA3B-207ENST00000441915 BORCS6Q96GS4 357 aa17.96■□□□□ 0.47
SEMA3B-207ENST00000441915 MRIQ9BWK5 157 aa17.96■□□□□ 0.47
SEMA3B-207ENST00000441915 SLITRK6Q9H5Y7 841 aa17.96■□□□□ 0.47
SEMA3B-207ENST00000441915 DBNDD1Q9H9R9 158 aa17.96■□□□□ 0.47
SEMA3B-207ENST00000441915 STXBP5LQ9Y2K9 1186 aa17.96■□□□□ 0.47
SEMA3B-207ENST00000441915 ERLIN2O94905 339 aa17.95■□□□□ 0.46
SEMA3B-207ENST00000441915 CTNNA1P35221 906 aaKnown RBP17.95■□□□□ 0.46
SEMA3B-207ENST00000441915 GALCP54803 685 aa17.95■□□□□ 0.46
SEMA3B-207ENST00000441915 CTTNQ14247 550 aaKnown RBP17.95■□□□□ 0.46
SEMA3B-207ENST00000441915 SH3BP5LQ7L8J4 393 aa17.95■□□□□ 0.46
SEMA3B-207ENST00000441915 DDX42Q86XP3 938 aaKnown RBP eCLIP17.95■□□□□ 0.46
SEMA3B-207ENST00000441915 SPATS2Q86XZ4 545 aaKnown RBP17.95■□□□□ 0.46
SEMA3B-207ENST00000441915 ARFGAP2Q8N6H7 521 aa17.95■□□□□ 0.46
SEMA3B-207ENST00000441915 HSD17B14Q9BPX1 270 aa17.95■□□□□ 0.46
SEMA3B-207ENST00000441915 TMBIM4Q9HC24 238 aa17.95■□□□□ 0.46
SEMA3B-207ENST00000441915 AMACRQ9UHK6 382 aa17.95■□□□□ 0.46
SEMA3B-207ENST00000441915 AMFRQ9UKV5 643 aa17.95■□□□□ 0.46
SEMA3B-207ENST00000441915 SIPA1L1O43166 1804 aa17.95■□□□□ 0.46
SEMA3B-207ENST00000441915 OPLAHO14841 1288 aa17.95■□□□□ 0.46
SEMA3B-207ENST00000441915 LMNB1P20700 586 aa17.95■□□□□ 0.46
SEMA3B-207ENST00000441915 NMT1P30419 496 aaKnown RBP17.95■□□□□ 0.46
SEMA3B-207ENST00000441915 SOX5P35711 763 aa17.95■□□□□ 0.46
SEMA3B-207ENST00000441915 PSEN1P49768 467 aa17.95■□□□□ 0.46
SEMA3B-207ENST00000441915 ITGB3BPQ13352 177 aaPredicted RBP17.95■□□□□ 0.46
SEMA3B-207ENST00000441915 TPH2Q8IWU9 490 aa17.95■□□□□ 0.46
SEMA3B-207ENST00000441915 HES6Q96HZ4 224 aa17.95■□□□□ 0.46
SEMA3B-207ENST00000441915 MKNK1Q9BUB5 465 aa17.95■□□□□ 0.46
SEMA3B-207ENST00000441915 STK33Q9BYT3 514 aa17.95■□□□□ 0.46
SEMA3B-207ENST00000441915 CENPHQ9H3R5 247 aa17.95■□□□□ 0.46
SEMA3B-207ENST00000441915 PARVGQ9HBI0 331 aa17.95■□□□□ 0.46
SEMA3B-207ENST00000441915 TUFT1Q9NNX1 390 aa17.95■□□□□ 0.46
SEMA3B-207ENST00000441915 F8VZ95 297 aa17.94■□□□□ 0.46
SEMA3B-207ENST00000441915 TAL1P17542 331 aaPredicted RBP17.94■□□□□ 0.46
SEMA3B-207ENST00000441915 MDH1P40925 334 aaKnown RBP17.94■□□□□ 0.46
SEMA3B-207ENST00000441915 NFIL3Q16649 462 aa17.94■□□□□ 0.46
SEMA3B-207ENST00000441915 KCNQ5Q9NR82 932 aa17.94■□□□□ 0.46
SEMA3B-207ENST00000441915 ZMYM2Q9UBW7 1377 aa17.94■□□□□ 0.46
SEMA3B-207ENST00000441915 PIK3CDO00329 1044 aa17.94■□□□□ 0.46
SEMA3B-207ENST00000441915 INPP5BP32019 993 aa17.94■□□□□ 0.46
SEMA3B-207ENST00000441915 LIG3P49916 1009 aa17.94■□□□□ 0.46
SEMA3B-207ENST00000441915 HS2ST1Q7LGA3 356 aa17.94■□□□□ 0.46
SEMA3B-207ENST00000441915 OTOP1Q7RTM1 612 aa17.94■□□□□ 0.46
SEMA3B-207ENST00000441915 IGLV3-22A0A075B6J6 115 aa17.93■□□□□ 0.46
SEMA3B-207ENST00000441915 BHMG1C9JSJ3 638 aaPredicted RBP17.93■□□□□ 0.46
SEMA3B-207ENST00000441915 SLITRK3O94933 977 aa17.93■□□□□ 0.46
SEMA3B-207ENST00000441915 ITGA4P13612 1032 aa17.93■□□□□ 0.46
SEMA3B-207ENST00000441915 FMO5P49326 533 aa17.93■□□□□ 0.46
SEMA3B-207ENST00000441915 MTMR3Q13615 1198 aa17.93■□□□□ 0.46
SEMA3B-207ENST00000441915 ZC2HC1CQ53FD0 456 aaPredicted RBP17.93■□□□□ 0.46
SEMA3B-207ENST00000441915 LRCH2Q5VUJ6 765 aa17.93■□□□□ 0.46
SEMA3B-207ENST00000441915 C1orf186Q6ZWK4 172 aa17.93■□□□□ 0.46
SEMA3B-207ENST00000441915 FMNL3Q8IVF7 1028 aa17.93■□□□□ 0.46
SEMA3B-207ENST00000441915 GLYCTKQ8IVS8 523 aa17.93■□□□□ 0.46
SEMA3B-207ENST00000441915 SLC30A5Q8TAD4 765 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms