RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 CRYBB1P53674 252 aaPredicted RBP6.79□□□□□ -1.32
PTPRR-204ENST00000440835 ACTR2P61160 394 aa6.79□□□□□ -1.32
PTPRR-204ENST00000440835 PLCB3Q01970 1234 aa6.79□□□□□ -1.32
PTPRR-204ENST00000440835 SLC24A5Q71RS6 500 aa6.79□□□□□ -1.32
PTPRR-204ENST00000440835 TRIM50Q86XT4 487 aa6.79□□□□□ -1.32
PTPRR-204ENST00000440835 PHF7Q9BWX1 381 aaPredicted RBP6.79□□□□□ -1.32
PTPRR-204ENST00000440835 AGO4Q9HCK5 861 aaKnown RBP6.79□□□□□ -1.32
PTPRR-204ENST00000440835 ERVK-5Q9HDB9 667 aa6.79□□□□□ -1.32
PTPRR-204ENST00000440835 NGRNQ9NPE2 291 aaKnown RBP6.79□□□□□ -1.32
PTPRR-204ENST00000440835 FOXD4L1Q9NU39 408 aa6.79□□□□□ -1.32
PTPRR-204ENST00000440835 TMEM161AQ9NX61 479 aa6.79□□□□□ -1.32
PTPRR-204ENST00000440835 PADI3Q9ULW8 664 aa6.79□□□□□ -1.32
PTPRR-204ENST00000440835 TRPC6Q9Y210 931 aa6.79□□□□□ -1.32
PTPRR-204ENST00000440835 MRPL42Q9Y6G3 142 aaKnown RBP6.79□□□□□ -1.32
PTPRR-204ENST00000440835 NID2Q14112 1375 aa6.79□□□□□ -1.32
PTPRR-204ENST00000440835 MYH9P35579 1960 aaKnown RBP6.79□□□□□ -1.32
PTPRR-204ENST00000440835 ATP9AO75110 1047 aa6.79□□□□□ -1.32
PTPRR-204ENST00000440835 GIT2Q14161 759 aa6.79□□□□□ -1.32
PTPRR-204ENST00000440835 RABEP1Q15276 862 aa6.79□□□□□ -1.32
PTPRR-204ENST00000440835 FOXD4L5Q5VV16 416 aaPredicted RBP6.79□□□□□ -1.32
PTPRR-204ENST00000440835 RNF135Q8IUD6 432 aa6.79□□□□□ -1.32
PTPRR-204ENST00000440835 RDM1Q8NG50 284 aa6.79□□□□□ -1.32
PTPRR-204ENST00000440835 BICD2Q8TD16 824 aa6.79□□□□□ -1.32
PTPRR-204ENST00000440835 FOXD4L4Q8WXT5 416 aaPredicted RBP6.79□□□□□ -1.32
PTPRR-204ENST00000440835 KHSRPQ92945 711 aaKnown RBP eCLIP6.79□□□□□ -1.32
PTPRR-204ENST00000440835 NECTIN4Q96NY8 510 aa6.79□□□□□ -1.32
PTPRR-204ENST00000440835 RAPGEFL1Q9UHV5 662 aa6.79□□□□□ -1.32
PTPRR-204ENST00000440835 PUF60Q9UHX1 559 aaKnown RBP6.79□□□□□ -1.32
PTPRR-204ENST00000440835 CIZ1Q9ULV3 898 aaPredicted RBP6.79□□□□□ -1.32
PTPRR-204ENST00000440835 NR2E1Q9Y466 385 aa6.79□□□□□ -1.32
PTPRR-204ENST00000440835 H3BQ06 376 aaPredicted RBP6.78□□□□□ -1.32
PTPRR-204ENST00000440835 ITGB1P05556 798 aa6.78□□□□□ -1.32
PTPRR-204ENST00000440835 CD52P31358 61 aa6.78□□□□□ -1.32
PTPRR-204ENST00000440835 CLK2P49760 499 aaKnown RBP6.78□□□□□ -1.32
PTPRR-204ENST00000440835 NDUFV1P49821 464 aa6.78□□□□□ -1.32
PTPRR-204ENST00000440835 NECTIN1Q15223 517 aa6.78□□□□□ -1.32
PTPRR-204ENST00000440835 DUSP6Q16828 381 aa6.78□□□□□ -1.32
PTPRR-204ENST00000440835 ZSCAN23Q3MJ62 389 aa6.78□□□□□ -1.32
PTPRR-204ENST00000440835 ABHD15Q6UXT9 468 aa6.78□□□□□ -1.32
PTPRR-204ENST00000440835 FBXL16Q8N461 479 aa6.78□□□□□ -1.32
PTPRR-204ENST00000440835 LINC01599Q8WXQ3 324 aa6.78□□□□□ -1.32
PTPRR-204ENST00000440835 SUSD6Q92537 303 aa6.78□□□□□ -1.32
PTPRR-204ENST00000440835 NEK1Q96PY6 1258 aa6.78□□□□□ -1.32
PTPRR-204ENST00000440835 PCYT2Q99447 389 aa6.78□□□□□ -1.32
PTPRR-204ENST00000440835 LSG1Q9H089 658 aaKnown RBP6.78□□□□□ -1.32
PTPRR-204ENST00000440835 TMEM117Q9H0C3 514 aa6.78□□□□□ -1.32
PTPRR-204ENST00000440835 IL25Q9H293 177 aa6.78□□□□□ -1.32
PTPRR-204ENST00000440835 BARHL2Q9NY43 387 aa6.78□□□□□ -1.32
PTPRR-204ENST00000440835 PPME1Q9Y570 386 aa6.78□□□□□ -1.32
PTPRR-204ENST00000440835 KMT2EQ8IZD2 1858 aa6.78□□□□□ -1.32
PTPRR-204ENST00000440835 PLXNA4Q9HCM2 1894 aa6.78□□□□□ -1.32
PTPRR-204ENST00000440835 BRWD1Q9NSI6 2320 aa6.78□□□□□ -1.32
PTPRR-204ENST00000440835 SLC27A2O14975 620 aa6.78□□□□□ -1.32
PTPRR-204ENST00000440835 TBX10O75333 385 aa6.78□□□□□ -1.32
PTPRR-204ENST00000440835 RPS6KA5O75582 802 aa6.78□□□□□ -1.32
PTPRR-204ENST00000440835 CD2BP2O95400 341 aaKnown RBP6.78□□□□□ -1.32
PTPRR-204ENST00000440835 SKIP12755 728 aa6.78□□□□□ -1.32
PTPRR-204ENST00000440835 U2AF2P26368 475 aaKnown RBP eCLIP6.78□□□□□ -1.32
PTPRR-204ENST00000440835 NAPAP54920 295 aa6.78□□□□□ -1.32
PTPRR-204ENST00000440835 ZXDAP98168 799 aa6.78□□□□□ -1.32
PTPRR-204ENST00000440835 NHLH1Q02575 133 aa6.78□□□□□ -1.32
PTPRR-204ENST00000440835 TRIM67Q6ZTA4 783 aa6.78□□□□□ -1.32
PTPRR-204ENST00000440835 UBALD2Q8IYN6 164 aa6.78□□□□□ -1.32
PTPRR-204ENST00000440835 BCAS3Q9H6U6 928 aa6.78□□□□□ -1.32
PTPRR-204ENST00000440835 ATP6V0A4Q9HBG4 840 aa6.78□□□□□ -1.32
PTPRR-204ENST00000440835 SENP2Q9HC62 589 aa6.78□□□□□ -1.32
PTPRR-204ENST00000440835 TLR9Q9NR96 1032 aa6.78□□□□□ -1.32
PTPRR-204ENST00000440835 CNTNAP5Q8WYK1 1306 aa6.78□□□□□ -1.32
PTPRR-204ENST00000440835 DENND3A2RUS2 1198 aa6.77□□□□□ -1.32
PTPRR-204ENST00000440835 FAM86C2PA6NEL3 165 aa6.77□□□□□ -1.32
PTPRR-204ENST00000440835 TMEM221A6NGB7 291 aa6.77□□□□□ -1.32
PTPRR-204ENST00000440835 C9IYK1 514 aa6.77□□□□□ -1.32
PTPRR-204ENST00000440835 M0R296 226 aa6.77□□□□□ -1.32
PTPRR-204ENST00000440835 SORBS3O60504 671 aa6.77□□□□□ -1.32
PTPRR-204ENST00000440835 PLEKHA8P1O95397 391 aa6.77□□□□□ -1.32
PTPRR-204ENST00000440835 EOMESO95936 686 aa6.77□□□□□ -1.32
PTPRR-204ENST00000440835 C1RP00736 705 aa6.77□□□□□ -1.32
PTPRR-204ENST00000440835 PSAPP07602 524 aa6.77□□□□□ -1.32
PTPRR-204ENST00000440835 TMOD1P28289 359 aa6.77□□□□□ -1.32
PTPRR-204ENST00000440835 SIGLEC14Q08ET2 396 aa6.77□□□□□ -1.32
PTPRR-204ENST00000440835 CREB3L3Q68CJ9 461 aa6.77□□□□□ -1.32
PTPRR-204ENST00000440835 CAVIN1Q6NZI2 390 aaKnown RBP6.77□□□□□ -1.32
PTPRR-204ENST00000440835 ZNF771Q7L3S4 317 aaPredicted RBP6.77□□□□□ -1.32
PTPRR-204ENST00000440835 HEATR3Q7Z4Q2 680 aa6.77□□□□□ -1.32
PTPRR-204ENST00000440835 RTN4RL1Q86UN2 441 aaPredicted RBP6.77□□□□□ -1.32
PTPRR-204ENST00000440835 SUGP1Q8IWZ8 645 aaKnown RBP6.77□□□□□ -1.32
PTPRR-204ENST00000440835 KLHL23Q8NBE8 558 aa6.77□□□□□ -1.32
PTPRR-204ENST00000440835 POF1BQ8WVV4 589 aa6.77□□□□□ -1.32
PTPRR-204ENST00000440835 CASP10Q92851 521 aa6.77□□□□□ -1.32
PTPRR-204ENST00000440835 SNX21Q969T3 373 aa6.77□□□□□ -1.32
PTPRR-204ENST00000440835 TRAIPQ9BWF2 469 aa6.77□□□□□ -1.32
PTPRR-204ENST00000440835 MRPL9Q9BYD2 267 aaKnown RBP6.77□□□□□ -1.32
PTPRR-204ENST00000440835 ANO3Q9BYT9 981 aa6.77□□□□□ -1.32
PTPRR-204ENST00000440835 TLE6Q9H808 572 aa6.77□□□□□ -1.32
PTPRR-204ENST00000440835 AGO3Q9H9G7 860 aaKnown RBP6.77□□□□□ -1.32
PTPRR-204ENST00000440835 ANO2Q9NQ90 1003 aa6.77□□□□□ -1.32
PTPRR-204ENST00000440835 ZNF302Q9NR11 478 aa6.77□□□□□ -1.32
PTPRR-204ENST00000440835 CHST12Q9NRB3 414 aa6.77□□□□□ -1.32
PTPRR-204ENST00000440835 DZANK1Q9NVP4 752 aa6.77□□□□□ -1.32
PTPRR-204ENST00000440835 MAFBQ9Y5Q3 323 aaPredicted RBP6.77□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms