RNA–Protein interactions for RNA: ENST00000440293.5

HDAC7-213, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-213ENST00000440293 PTCRAQ6ISU1 281 aaPredicted RBP20.33■□□□□ 0.85
HDAC7-213ENST00000440293 POTEDQ86YR6 584 aa20.33■□□□□ 0.85
HDAC7-213ENST00000440293 TMEM192Q8IY95 271 aa20.33■□□□□ 0.85
HDAC7-213ENST00000440293 CKAP2LQ8IYA6 745 aa20.33■□□□□ 0.85
HDAC7-213ENST00000440293 BANK1Q8NDB2 785 aa20.33■□□□□ 0.85
HDAC7-213ENST00000440293 ATP8B4Q8TF62 1192 aa20.33■□□□□ 0.85
HDAC7-213ENST00000440293 KHSRPQ92945 711 aaKnown RBP eCLIP20.33■□□□□ 0.85
HDAC7-213ENST00000440293 RWDD3Q9Y3V2 267 aa20.33■□□□□ 0.85
HDAC7-213ENST00000440293 C5orf67F2Z3F1 127 aa20.32■□□□□ 0.84
HDAC7-213ENST00000440293 RPLP2P05387 115 aaKnown RBP20.32■□□□□ 0.84
HDAC7-213ENST00000440293 ATP4AP20648 1035 aa20.32■□□□□ 0.84
HDAC7-213ENST00000440293 TRAPPC10P48553 1259 aa20.32■□□□□ 0.84
HDAC7-213ENST00000440293 GPM6BQ13491 265 aa20.32■□□□□ 0.84
HDAC7-213ENST00000440293 CALCRLQ16602 461 aa20.32■□□□□ 0.84
HDAC7-213ENST00000440293 LMAN2LQ9H0V9 348 aa20.32■□□□□ 0.84
HDAC7-213ENST00000440293 NOL7Q9UMY1 257 aaKnown RBP20.32■□□□□ 0.84
HDAC7-213ENST00000440293 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.31■□□□□ 0.84
HDAC7-213ENST00000440293 MBLAC1A4D2B0 266 aaPredicted RBP20.31■□□□□ 0.84
HDAC7-213ENST00000440293 NEMFO60524 1076 aa20.31■□□□□ 0.84
HDAC7-213ENST00000440293 IGBP1P78318 339 aa20.31■□□□□ 0.84
HDAC7-213ENST00000440293 PPP2R5CQ13362 524 aa20.31■□□□□ 0.84
HDAC7-213ENST00000440293 ZNF484Q5JVG2 852 aa20.31■□□□□ 0.84
HDAC7-213ENST00000440293 MARCH8Q5T0T0 291 aa20.31■□□□□ 0.84
HDAC7-213ENST00000440293 MCTP1Q6DN14 999 aa20.31■□□□□ 0.84
HDAC7-213ENST00000440293 TAF2Q6P1X5 1199 aa20.31■□□□□ 0.84
HDAC7-213ENST00000440293 BBXQ8WY36 941 aaPredicted RBP20.31■□□□□ 0.84
HDAC7-213ENST00000440293 INTS4Q96HW7 963 aaKnown RBP20.31■□□□□ 0.84
HDAC7-213ENST00000440293 NSUN3Q9H649 340 aaKnown RBP20.31■□□□□ 0.84
HDAC7-213ENST00000440293 NRBP2Q9NSY0 501 aa20.31■□□□□ 0.84
HDAC7-213ENST00000440293 BRWD1Q9NSI6 2320 aa20.3■□□□□ 0.84
HDAC7-213ENST00000440293 WNT7AO00755 349 aa20.3■□□□□ 0.84
HDAC7-213ENST00000440293 MCM7P33993 719 aa20.3■□□□□ 0.84
HDAC7-213ENST00000440293 ORC2Q13416 577 aaPredicted RBP20.3■□□□□ 0.84
HDAC7-213ENST00000440293 ZNF174Q15697 407 aa20.3■□□□□ 0.84
HDAC7-213ENST00000440293 FAM43BQ6ZT52 329 aaPredicted RBP20.3■□□□□ 0.84
HDAC7-213ENST00000440293 FAM167AQ96KS9 214 aa20.3■□□□□ 0.84
HDAC7-213ENST00000440293 IFIH1Q9BYX4 1025 aaKnown RBP20.3■□□□□ 0.84
HDAC7-213ENST00000440293 TUBE1Q9UJT0 475 aa20.3■□□□□ 0.84
HDAC7-213ENST00000440293 VAV3Q9UKW4 847 aa20.3■□□□□ 0.84
HDAC7-213ENST00000440293 PCDHA12Q9UN75 941 aa20.3■□□□□ 0.84
HDAC7-213ENST00000440293 EML1O00423 815 aa20.29■□□□□ 0.84
HDAC7-213ENST00000440293 IL9P15248 144 aa20.29■□□□□ 0.84
HDAC7-213ENST00000440293 PDCP20941 246 aa20.29■□□□□ 0.84
HDAC7-213ENST00000440293 TTC38Q5R3I4 469 aa20.29■□□□□ 0.84
HDAC7-213ENST00000440293 RSPH3Q86UC2 560 aa20.29■□□□□ 0.84
HDAC7-213ENST00000440293 MTMR9Q96QG7 549 aa20.29■□□□□ 0.84
HDAC7-213ENST00000440293 KCNH6Q9H252 994 aa20.29■□□□□ 0.84
HDAC7-213ENST00000440293 PCDHA2Q9Y5H9 948 aa20.29■□□□□ 0.84
HDAC7-213ENST00000440293 MICAL3Q7RTP6 2002 aa20.29■□□□□ 0.84
HDAC7-213ENST00000440293 IGSF9BQ9UPX0 1349 aa20.28■□□□□ 0.84
HDAC7-213ENST00000440293 KLRC1P26715 233 aa20.28■□□□□ 0.84
HDAC7-213ENST00000440293 SSTR3P32745 418 aaPredicted RBP20.28■□□□□ 0.84
HDAC7-213ENST00000440293 TXKP42681 527 aa20.28■□□□□ 0.84
HDAC7-213ENST00000440293 EPHA7Q15375 998 aa20.28■□□□□ 0.84
HDAC7-213ENST00000440293 RUFY4Q6ZNE9 571 aa20.28■□□□□ 0.84
HDAC7-213ENST00000440293 TRMT1LQ7Z2T5 733 aaKnown RBP20.28■□□□□ 0.84
HDAC7-213ENST00000440293 HSCBQ8IWL3 235 aa20.28■□□□□ 0.84
HDAC7-213ENST00000440293 FIBCD1Q8N539 461 aa20.28■□□□□ 0.84
HDAC7-213ENST00000440293 TRAPPC12Q8WVT3 735 aa20.28■□□□□ 0.84
HDAC7-213ENST00000440293 C11orf84Q9BUA3 381 aaPredicted RBP20.28■□□□□ 0.84
HDAC7-213ENST00000440293 TTC12Q9H892 705 aaPredicted RBP20.28■□□□□ 0.84
HDAC7-213ENST00000440293 CEP131Q9UPN4 1083 aa20.28■□□□□ 0.84
HDAC7-213ENST00000440293 COL1A2P08123 1366 aa20.28■□□□□ 0.84
HDAC7-213ENST00000440293 ZNF862O60290 1169 aa20.27■□□□□ 0.84
HDAC7-213ENST00000440293 DKC1O60832 514 aaKnown RBP eCLIP20.27■□□□□ 0.84
HDAC7-213ENST00000440293 UPP2O95045 317 aa20.27■□□□□ 0.84
HDAC7-213ENST00000440293 OATP04181 439 aa20.27■□□□□ 0.84
HDAC7-213ENST00000440293 PSMC5P62195 406 aa20.27■□□□□ 0.84
HDAC7-213ENST00000440293 UGCGQ16739 394 aa20.27■□□□□ 0.84
HDAC7-213ENST00000440293 TCEAL5Q5H9L2 206 aa20.27■□□□□ 0.84
HDAC7-213ENST00000440293 NCAPH2Q6IBW4 605 aa20.27■□□□□ 0.84
HDAC7-213ENST00000440293 MTHFD1LQ6UB35 978 aa20.27■□□□□ 0.84
HDAC7-213ENST00000440293 CLP1Q92989 425 aaKnown RBP20.27■□□□□ 0.84
HDAC7-213ENST00000440293 TMEM60Q9H2L4 133 aa20.27■□□□□ 0.84
HDAC7-213ENST00000440293 SQORQ9Y6N5 450 aa20.27■□□□□ 0.84
HDAC7-213ENST00000440293 C19orf67A6NJJ6 358 aa20.26■□□□□ 0.83
HDAC7-213ENST00000440293 P4HBP07237 508 aaKnown RBP20.26■□□□□ 0.83
HDAC7-213ENST00000440293 CTSHP09668 335 aa20.26■□□□□ 0.83
HDAC7-213ENST00000440293 BMPR1AP36894 532 aa20.26■□□□□ 0.83
HDAC7-213ENST00000440293 QARSP47897 775 aaKnown RBP20.26■□□□□ 0.83
HDAC7-213ENST00000440293 TOB1P50616 345 aaPredicted RBP20.26■□□□□ 0.83
HDAC7-213ENST00000440293 PRKCEQ02156 737 aa20.26■□□□□ 0.83
HDAC7-213ENST00000440293 SPIRE1Q08AE8 756 aa20.26■□□□□ 0.83
HDAC7-213ENST00000440293 CTC1Q2NKJ3 1217 aa20.26■□□□□ 0.83
HDAC7-213ENST00000440293 XKR3Q5GH77 459 aa20.26■□□□□ 0.83
HDAC7-213ENST00000440293 NME8Q8N427 588 aa20.26■□□□□ 0.83
HDAC7-213ENST00000440293 DNAJB3Q8WWF6 145 aa20.26■□□□□ 0.83
HDAC7-213ENST00000440293 PLVAPQ9BX97 442 aa20.26■□□□□ 0.83
HDAC7-213ENST00000440293 SMIM35A0A1B0GVV1 85 aa20.25■□□□□ 0.83
HDAC7-213ENST00000440293 ZBTB42B2RXF5 422 aa20.25■□□□□ 0.83
HDAC7-213ENST00000440293 MAGEB2O15479 319 aa20.25■□□□□ 0.83
HDAC7-213ENST00000440293 DCXO43602 365 aa20.25■□□□□ 0.83
HDAC7-213ENST00000440293 CHRNA1P02708 482 aa20.25■□□□□ 0.83
HDAC7-213ENST00000440293 NAALADL2Q58DX5 795 aa20.25■□□□□ 0.83
HDAC7-213ENST00000440293 RILPL1Q5EBL4 403 aa20.25■□□□□ 0.83
HDAC7-213ENST00000440293 ADHFE1Q8IWW8 467 aa20.25■□□□□ 0.83
HDAC7-213ENST00000440293 ZBTB10Q96DT7 871 aa20.25■□□□□ 0.83
HDAC7-213ENST00000440293 NIFKQ9BYG3 293 aaKnown RBP20.25■□□□□ 0.83
HDAC7-213ENST00000440293 FOXD4L1Q9NU39 408 aa20.25■□□□□ 0.83
HDAC7-213ENST00000440293 FAM86C2PA6NEL3 165 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms