RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 TCF20Q9UGU0 1960 aaKnown RBP22.33■■□□□ 1.17
SHROOM1-204ENST00000440118 CRYBB1P53674 252 aaPredicted RBP22.33■■□□□ 1.17
SHROOM1-204ENST00000440118 MTERF2Q49AM1 385 aa22.33■■□□□ 1.17
SHROOM1-204ENST00000440118 RNF216Q9NWF9 866 aaPredicted RBP22.33■■□□□ 1.17
SHROOM1-204ENST00000440118 COG5Q9UP83 839 aa22.33■■□□□ 1.17
SHROOM1-204ENST00000440118 BRWD1Q9NSI6 2320 aa22.32■■□□□ 1.16
SHROOM1-204ENST00000440118 TFF2Q03403 129 aa22.32■■□□□ 1.16
SHROOM1-204ENST00000440118 PAN2Q504Q3 1202 aaKnown RBP22.32■■□□□ 1.16
SHROOM1-204ENST00000440118 BANK1Q8NDB2 785 aa22.32■■□□□ 1.16
SHROOM1-204ENST00000440118 NSUN7Q8NE18 718 aaKnown RBP22.32■■□□□ 1.16
SHROOM1-204ENST00000440118 TMEM40Q8WWA1 233 aa22.32■■□□□ 1.16
SHROOM1-204ENST00000440118 HLA-CQ95604 372 aa22.32■■□□□ 1.16
SHROOM1-204ENST00000440118 FAM20AQ96MK3 541 aa22.32■■□□□ 1.16
SHROOM1-204ENST00000440118 CDHR5Q9HBB8 845 aa22.32■■□□□ 1.16
SHROOM1-204ENST00000440118 ERVK-5Q9HDB9 667 aa22.32■■□□□ 1.16
SHROOM1-204ENST00000440118 ST3GAL5Q9UNP4 418 aa22.32■■□□□ 1.16
SHROOM1-204ENST00000440118 JAK2O60674 1132 aa22.31■■□□□ 1.16
SHROOM1-204ENST00000440118 BAG4O95429 457 aaKnown RBP22.31■■□□□ 1.16
SHROOM1-204ENST00000440118 NLRP11P59045 1033 aaKnown RBP22.31■■□□□ 1.16
SHROOM1-204ENST00000440118 TIGD5Q53EQ6 642 aa22.31■■□□□ 1.16
SHROOM1-204ENST00000440118 XKR3Q5GH77 459 aa22.31■■□□□ 1.16
SHROOM1-204ENST00000440118 PPP4R3AQ6IN85 833 aa22.31■■□□□ 1.16
SHROOM1-204ENST00000440118 ADAMTS19Q8TE59 1207 aa22.31■■□□□ 1.16
SHROOM1-204ENST00000440118 C11orf84Q9BUA3 381 aaPredicted RBP22.31■■□□□ 1.16
SHROOM1-204ENST00000440118 C1orf112Q9NSG2 853 aa22.31■■□□□ 1.16
SHROOM1-204ENST00000440118 PCDHB7Q9Y5E2 793 aa22.31■■□□□ 1.16
SHROOM1-204ENST00000440118 DDX11L8A8MPP1 907 aa22.3■■□□□ 1.16
SHROOM1-204ENST00000440118 H3BNC9 293 aa22.3■■□□□ 1.16
SHROOM1-204ENST00000440118 DKC1O60832 514 aaKnown RBP eCLIP22.3■■□□□ 1.16
SHROOM1-204ENST00000440118 DGKIO75912 1065 aa22.3■■□□□ 1.16
SHROOM1-204ENST00000440118 FDPSP14324 419 aaKnown RBP22.3■■□□□ 1.16
SHROOM1-204ENST00000440118 SARSP49591 514 aaKnown RBP22.3■■□□□ 1.16
SHROOM1-204ENST00000440118 PSMC5P62195 406 aa22.3■■□□□ 1.16
SHROOM1-204ENST00000440118 NR5A1Q13285 461 aa22.3■■□□□ 1.16
SHROOM1-204ENST00000440118 FAM43BQ6ZT52 329 aaPredicted RBP22.3■■□□□ 1.16
SHROOM1-204ENST00000440118 POTEDQ86YR6 584 aa22.3■■□□□ 1.16
SHROOM1-204ENST00000440118 ZNF710Q8N1W2 664 aa22.3■■□□□ 1.16
SHROOM1-204ENST00000440118 NLRP7Q8WX94 980 aa22.3■■□□□ 1.16
SHROOM1-204ENST00000440118 MRPL38Q96DV4 380 aaKnown RBP22.3■■□□□ 1.16
SHROOM1-204ENST00000440118 ADAM2Q99965 735 aa22.3■■□□□ 1.16
SHROOM1-204ENST00000440118 TMX1Q9H3N1 280 aa22.3■■□□□ 1.16
SHROOM1-204ENST00000440118 LIMCH1Q9UPQ0 1083 aa22.3■■□□□ 1.16
SHROOM1-204ENST00000440118 NCOR1O75376 2440 aa22.29■■□□□ 1.16
SHROOM1-204ENST00000440118 DNM2P50570 870 aa22.29■■□□□ 1.16
SHROOM1-204ENST00000440118 PPP2R5CQ13362 524 aa22.29■■□□□ 1.16
SHROOM1-204ENST00000440118 SAFBQ15424 915 aaKnown RBP eCLIP22.29■■□□□ 1.16
SHROOM1-204ENST00000440118 NCAPH2Q6IBW4 605 aa22.29■■□□□ 1.16
SHROOM1-204ENST00000440118 RTN4RL1Q86UN2 441 aaPredicted RBP22.29■■□□□ 1.16
SHROOM1-204ENST00000440118 FAM228AQ86W67 206 aa22.29■■□□□ 1.16
SHROOM1-204ENST00000440118 SLFN12Q8IYM2 578 aa22.29■■□□□ 1.16
SHROOM1-204ENST00000440118 CMTR2Q8IYT2 770 aaKnown RBP22.29■■□□□ 1.16
SHROOM1-204ENST00000440118 ZNF668Q96K58 619 aaPredicted RBP22.29■■□□□ 1.16
SHROOM1-204ENST00000440118 RC3H2Q9HBD1 1191 aaKnown RBP22.29■■□□□ 1.16
SHROOM1-204ENST00000440118 KCNMB3Q9NPA1 279 aa22.29■■□□□ 1.16
SHROOM1-204ENST00000440118 FNDC1Q4ZHG4 1894 aaPredicted RBP22.28■■□□□ 1.16
SHROOM1-204ENST00000440118 SPTBN5Q9NRC6 3674 aaKnown RBP22.28■■□□□ 1.16
SHROOM1-204ENST00000440118 TMEM150BA6NC51 233 aa22.28■■□□□ 1.16
SHROOM1-204ENST00000440118 FAM205CA6NFA0 338 aa22.28■■□□□ 1.16
SHROOM1-204ENST00000440118 TBX3O15119 743 aa22.28■■□□□ 1.16
SHROOM1-204ENST00000440118 GPR32O75388 356 aa22.28■■□□□ 1.16
SHROOM1-204ENST00000440118 CSPG5O95196 566 aa22.28■■□□□ 1.16
SHROOM1-204ENST00000440118 MMP1P03956 469 aa22.28■■□□□ 1.16
SHROOM1-204ENST00000440118 RB1P06400 928 aa22.28■■□□□ 1.16
SHROOM1-204ENST00000440118 SPOUT1Q5T280 376 aaKnown RBP22.28■■□□□ 1.16
SHROOM1-204ENST00000440118 CCDC83Q8IWF9 413 aa22.28■■□□□ 1.16
SHROOM1-204ENST00000440118 DIS3L2Q8IYB7 885 aaKnown RBP22.28■■□□□ 1.16
SHROOM1-204ENST00000440118 SH2D3AQ9BRG2 576 aa22.28■■□□□ 1.16
SHROOM1-204ENST00000440118 VAV3Q9UKW4 847 aa22.28■■□□□ 1.16
SHROOM1-204ENST00000440118 ARID2Q68CP9 1835 aa22.27■■□□□ 1.16
SHROOM1-204ENST00000440118 ZSCAN20P17040 1043 aaPredicted RBP22.27■■□□□ 1.16
SHROOM1-204ENST00000440118 BMPR1AP36894 532 aa22.27■■□□□ 1.16
SHROOM1-204ENST00000440118 QARSP47897 775 aaKnown RBP22.27■■□□□ 1.16
SHROOM1-204ENST00000440118 KCNQ1P51787 676 aa22.27■■□□□ 1.16
SHROOM1-204ENST00000440118 EARS2Q5JPH6 523 aaKnown RBP22.27■■□□□ 1.16
SHROOM1-204ENST00000440118 B3GNT9Q6UX72 402 aa22.27■■□□□ 1.16
SHROOM1-204ENST00000440118 SLC24A5Q71RS6 500 aa22.27■■□□□ 1.16
SHROOM1-204ENST00000440118 ZNF689Q96CS4 500 aaPredicted RBP22.27■■□□□ 1.16
SHROOM1-204ENST00000440118 UHRF1Q96T88 793 aaPredicted RBP22.27■■□□□ 1.16
SHROOM1-204ENST00000440118 JPH2Q9BR39 696 aaPredicted RBP22.27■■□□□ 1.16
SHROOM1-204ENST00000440118 NIFKQ9BYG3 293 aaKnown RBP22.27■■□□□ 1.16
SHROOM1-204ENST00000440118 RGS18Q9NS28 235 aa22.27■■□□□ 1.16
SHROOM1-204ENST00000440118 MRPL42Q9Y6G3 142 aaKnown RBP22.27■■□□□ 1.16
SHROOM1-204ENST00000440118 ATG2AQ2TAZ0 1938 aa22.27■■□□□ 1.16
SHROOM1-204ENST00000440118 MYO7AQ13402 2215 aa22.26■■□□□ 1.15
SHROOM1-204ENST00000440118 EML1O00423 815 aa22.26■■□□□ 1.15
SHROOM1-204ENST00000440118 MGEA5O60502 916 aa22.26■■□□□ 1.15
SHROOM1-204ENST00000440118 GPC3P51654 580 aa22.26■■□□□ 1.15
SHROOM1-204ENST00000440118 CALCRLQ16602 461 aa22.26■■□□□ 1.15
SHROOM1-204ENST00000440118 PLA2G4FQ68DD2 849 aa22.26■■□□□ 1.15
SHROOM1-204ENST00000440118 EP400NLQ6ZTU2 488 aa22.26■■□□□ 1.15
SHROOM1-204ENST00000440118 LINC01465Q8N7H1 131 aa22.26■■□□□ 1.15
SHROOM1-204ENST00000440118 BTBD18B2RXH4 712 aa22.25■■□□□ 1.15
SHROOM1-204ENST00000440118 C5orf67F2Z3F1 127 aa22.25■■□□□ 1.15
SHROOM1-204ENST00000440118 P4HBP07237 508 aaKnown RBP22.25■■□□□ 1.15
SHROOM1-204ENST00000440118 EIF4BP23588 611 aaKnown RBP22.25■■□□□ 1.15
SHROOM1-204ENST00000440118 GATMP50440 423 aa22.25■■□□□ 1.15
SHROOM1-204ENST00000440118 CDC42EP1Q00587 391 aa22.25■■□□□ 1.15
SHROOM1-204ENST00000440118 GUCY1B3Q02153 619 aa22.25■■□□□ 1.15
SHROOM1-204ENST00000440118 TARBP2Q15633 366 aaKnown RBP22.25■■□□□ 1.15
SHROOM1-204ENST00000440118 C8orf34Q49A92 452 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms