RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 NOL7Q9UMY1 257 aaKnown RBP26.51■■□□□ 1.83
VARS-217ENST00000440048 GPR32O75388 356 aa26.5■■□□□ 1.83
VARS-217ENST00000440048 ARHGEF15O94989 841 aa26.5■■□□□ 1.83
VARS-217ENST00000440048 FOSL2P15408 326 aa26.5■■□□□ 1.83
VARS-217ENST00000440048 CUL4AQ13619 759 aa26.5■■□□□ 1.83
VARS-217ENST00000440048 CTTNQ14247 550 aaKnown RBP26.5■■□□□ 1.83
VARS-217ENST00000440048 PLA2G4FQ68DD2 849 aa26.5■■□□□ 1.83
VARS-217ENST00000440048 C4orf19Q8IY42 314 aa26.5■■□□□ 1.83
VARS-217ENST00000440048 RAD9AQ99638 391 aa26.5■■□□□ 1.83
VARS-217ENST00000440048 EIF2AK1Q9BQI3 630 aaKnown RBP26.5■■□□□ 1.83
VARS-217ENST00000440048 AKT3Q9Y243 479 aa26.5■■□□□ 1.83
VARS-217ENST00000440048 LCHNA4D1U4 455 aa26.49■■□□□ 1.83
VARS-217ENST00000440048 CRYBB1P53674 252 aaPredicted RBP26.49■■□□□ 1.83
VARS-217ENST00000440048 CYP4A11Q02928 519 aa26.49■■□□□ 1.83
VARS-217ENST00000440048 PAK2Q13177 524 aa26.49■■□□□ 1.83
VARS-217ENST00000440048 NBR1Q14596 966 aa26.49■■□□□ 1.83
VARS-217ENST00000440048 TMEM266Q2M3C6 531 aa26.49■■□□□ 1.83
VARS-217ENST00000440048 TMEM40Q8WWA1 233 aa26.49■■□□□ 1.83
VARS-217ENST00000440048 TOP1MTQ969P6 601 aa26.49■■□□□ 1.83
VARS-217ENST00000440048 PRDM12Q9H4Q4 367 aa26.49■■□□□ 1.83
VARS-217ENST00000440048 ZSWIM4Q9H7M6 989 aa26.49■■□□□ 1.83
VARS-217ENST00000440048 NOC2LQ9Y3T9 749 aaKnown RBP26.49■■□□□ 1.83
VARS-217ENST00000440048 TTC3P53804 2025 aa26.48■■□□□ 1.83
VARS-217ENST00000440048 TRANK1O15050 2925 aa26.48■■□□□ 1.83
VARS-217ENST00000440048 IGKV6-21A0A0C4DH24 114 aa26.48■■□□□ 1.83
VARS-217ENST00000440048 ENPP3O14638 875 aa26.48■■□□□ 1.83
VARS-217ENST00000440048 SLITRK3O94933 977 aa26.48■■□□□ 1.83
VARS-217ENST00000440048 OR52Z1P0C646 297 aa26.48■■□□□ 1.83
VARS-217ENST00000440048 TOB1P50616 345 aaPredicted RBP26.48■■□□□ 1.83
VARS-217ENST00000440048 NPEPPSP55786 919 aa26.48■■□□□ 1.83
VARS-217ENST00000440048 TAP1Q03518 808 aa26.48■■□□□ 1.83
VARS-217ENST00000440048 MCTP1Q6DN14 999 aa26.48■■□□□ 1.83
VARS-217ENST00000440048 MAFAQ8NHW3 353 aaPredicted RBP26.48■■□□□ 1.83
VARS-217ENST00000440048 OSMRQ99650 979 aa26.48■■□□□ 1.83
VARS-217ENST00000440048 HSD17B14Q9BPX1 270 aa26.48■■□□□ 1.83
VARS-217ENST00000440048 CYP26B1Q9NR63 512 aa26.48■■□□□ 1.83
VARS-217ENST00000440048 POTEMA6NI47 508 aa26.47■■□□□ 1.83
VARS-217ENST00000440048 H3BQV1 296 aa26.47■■□□□ 1.83
VARS-217ENST00000440048 MAFO75444 373 aaPredicted RBP26.47■■□□□ 1.83
VARS-217ENST00000440048 UPP2O95045 317 aa26.47■■□□□ 1.83
VARS-217ENST00000440048 NLRP11P59045 1033 aaKnown RBP26.47■■□□□ 1.83
VARS-217ENST00000440048 DRP2Q13474 957 aa26.47■■□□□ 1.83
VARS-217ENST00000440048 TPH2Q8IWU9 490 aa26.47■■□□□ 1.83
VARS-217ENST00000440048 ZNF579Q8NAF0 562 aaKnown RBP26.47■■□□□ 1.83
VARS-217ENST00000440048 LINC01599Q8WXQ3 324 aa26.47■■□□□ 1.83
VARS-217ENST00000440048 GAS2L1Q99501 681 aaPredicted RBP26.47■■□□□ 1.83
VARS-217ENST00000440048 FTHL17Q9BXU8 183 aa26.47■■□□□ 1.83
VARS-217ENST00000440048 ADAMTS10Q9H324 1103 aa26.47■■□□□ 1.83
VARS-217ENST00000440048 ERVK-5Q9HDB9 667 aa26.47■■□□□ 1.83
VARS-217ENST00000440048 ARID2Q68CP9 1835 aa26.46■■□□□ 1.83
VARS-217ENST00000440048 RPS6KA5O75582 802 aa26.46■■□□□ 1.83
VARS-217ENST00000440048 YWHABP31946 246 aaKnown RBP26.46■■□□□ 1.83
VARS-217ENST00000440048 HTRA4P83105 476 aaPredicted RBP26.46■■□□□ 1.83
VARS-217ENST00000440048 NFX1Q12986 1120 aaKnown RBP26.46■■□□□ 1.83
VARS-217ENST00000440048 RTN4RL1Q86UN2 441 aaPredicted RBP26.46■■□□□ 1.83
VARS-217ENST00000440048 ZNF710Q8N1W2 664 aa26.46■■□□□ 1.83
VARS-217ENST00000440048 C4orf32Q8N8J7 132 aa26.46■■□□□ 1.83
VARS-217ENST00000440048 NEK9Q8TD19 979 aa26.46■■□□□ 1.83
VARS-217ENST00000440048 CEP170P1Q96L14 293 aa26.46■■□□□ 1.83
VARS-217ENST00000440048 TMX1Q9H3N1 280 aa26.46■■□□□ 1.83
VARS-217ENST00000440048 INSL6Q9Y581 213 aa26.46■■□□□ 1.83
VARS-217ENST00000440048 EYSQ5T1H1 3165 aa26.46■■□□□ 1.83
VARS-217ENST00000440048 UNC80Q8N2C7 3258 aa26.45■■□□□ 1.83
VARS-217ENST00000440048 ZBTB39O15060 712 aa26.45■■□□□ 1.82
VARS-217ENST00000440048 TECP42680 631 aa26.45■■□□□ 1.82
VARS-217ENST00000440048 GPC3P51654 580 aa26.45■■□□□ 1.82
VARS-217ENST00000440048 LARP1BQ659C4 914 aaKnown RBP26.45■■□□□ 1.82
VARS-217ENST00000440048 OTUD6AQ7L8S5 288 aa26.45■■□□□ 1.82
VARS-217ENST00000440048 ZNF668Q96K58 619 aaPredicted RBP26.45■■□□□ 1.82
VARS-217ENST00000440048 CERS4Q9HA82 394 aa26.45■■□□□ 1.82
VARS-217ENST00000440048 ST3GAL5Q9UNP4 418 aa26.45■■□□□ 1.82
VARS-217ENST00000440048 PPME1Q9Y570 386 aa26.45■■□□□ 1.82
VARS-217ENST00000440048 PCDHB6Q9Y5E3 794 aa26.45■■□□□ 1.82
VARS-217ENST00000440048 PRUNE2Q8WUY3 3088 aa26.45■■□□□ 1.82
VARS-217ENST00000440048 LYPLA2O95372 231 aa26.44■■□□□ 1.82
VARS-217ENST00000440048 DNM2P50570 870 aa26.44■■□□□ 1.82
VARS-217ENST00000440048 SPRED2Q7Z698 418 aa26.44■■□□□ 1.82
VARS-217ENST00000440048 FAM228AQ86W67 206 aa26.44■■□□□ 1.82
VARS-217ENST00000440048 JPH2Q9BR39 696 aaPredicted RBP26.44■■□□□ 1.82
VARS-217ENST00000440048 TSPYL2Q9H2G4 693 aaPredicted RBP26.44■■□□□ 1.82
VARS-217ENST00000440048 GPR182O15218 404 aa26.43■■□□□ 1.82
VARS-217ENST00000440048 XKR9Q5GH70 373 aa26.43■■□□□ 1.82
VARS-217ENST00000440048 ODR4Q5SWX8 454 aa26.43■■□□□ 1.82
VARS-217ENST00000440048 DHX33Q9H6R0 707 aaKnown RBP26.43■■□□□ 1.82
VARS-217ENST00000440048 SUCLA2Q9P2R7 463 aaPredicted RBP26.43■■□□□ 1.82
VARS-217ENST00000440048 LINC01553A4QN01 128 aa26.42■■□□□ 1.82
VARS-217ENST00000440048 EIF4BP23588 611 aaKnown RBP26.42■■□□□ 1.82
VARS-217ENST00000440048 RFC5P40937 340 aa26.42■■□□□ 1.82
VARS-217ENST00000440048 PTGDRQ13258 359 aa26.42■■□□□ 1.82
VARS-217ENST00000440048 SP7Q8TDD2 431 aaPredicted RBP26.42■■□□□ 1.82
VARS-217ENST00000440048 SLC7A3Q8WY07 619 aa26.42■■□□□ 1.82
VARS-217ENST00000440048 SCLT1Q96NL6 688 aa26.42■■□□□ 1.82
VARS-217ENST00000440048 YME1L1Q96TA2 773 aa26.42■■□□□ 1.82
VARS-217ENST00000440048 MGEA5O60502 916 aa26.41■■□□□ 1.82
VARS-217ENST00000440048 SPATA31C1P0DKV0 1188 aa26.41■■□□□ 1.82
VARS-217ENST00000440048 POLGP54098 1239 aaPredicted RBP26.41■■□□□ 1.82
VARS-217ENST00000440048 ADGRE1Q14246 886 aa26.41■■□□□ 1.82
VARS-217ENST00000440048 FAM43BQ6ZT52 329 aaPredicted RBP26.41■■□□□ 1.82
VARS-217ENST00000440048 EXOC8Q8IYI6 725 aa26.41■■□□□ 1.82
VARS-217ENST00000440048 NLRP7Q8WX94 980 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms