RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 CLCN3P51790 818 aa18.35■□□□□ 0.53
SNRPD3-204ENST00000439775 COL19A1Q14993 1142 aa18.35■□□□□ 0.53
SNRPD3-204ENST00000439775 P2RX5Q93086 422 aa18.35■□□□□ 0.53
SNRPD3-204ENST00000439775 GJA10Q969M2 543 aa18.35■□□□□ 0.53
SNRPD3-204ENST00000439775 NECAB3Q96P71 396 aaPredicted RBP18.35■□□□□ 0.53
SNRPD3-204ENST00000439775 OSMRQ99650 979 aa18.35■□□□□ 0.53
SNRPD3-204ENST00000439775 RGS18Q9NS28 235 aa18.35■□□□□ 0.53
SNRPD3-204ENST00000439775 DDX25Q9UHL0 483 aaKnown RBP18.35■□□□□ 0.53
SNRPD3-204ENST00000439775 KCNJ14Q9UNX9 436 aa18.35■□□□□ 0.53
SNRPD3-204ENST00000439775 MRPL42Q9Y6G3 142 aaKnown RBP18.35■□□□□ 0.53
SNRPD3-204ENST00000439775 LOXHD1Q8IVV2 1947 aa18.34■□□□□ 0.53
SNRPD3-204ENST00000439775 DENND3A2RUS2 1198 aa18.34■□□□□ 0.53
SNRPD3-204ENST00000439775 AK2P54819 239 aa18.34■□□□□ 0.53
SNRPD3-204ENST00000439775 INF2Q27J81 1249 aa18.34■□□□□ 0.53
SNRPD3-204ENST00000439775 LEXMQ3ZCV2 418 aa18.34■□□□□ 0.53
SNRPD3-204ENST00000439775 NAALADL2Q58DX5 795 aa18.34■□□□□ 0.53
SNRPD3-204ENST00000439775 EFCAB12Q6NXP0 572 aa18.34■□□□□ 0.53
SNRPD3-204ENST00000439775 SLC24A5Q71RS6 500 aa18.34■□□□□ 0.53
SNRPD3-204ENST00000439775 MIER3Q7Z3K6 550 aa18.34■□□□□ 0.53
SNRPD3-204ENST00000439775 FAM228AQ86W67 206 aa18.34■□□□□ 0.53
SNRPD3-204ENST00000439775 ADAM2Q99965 735 aa18.34■□□□□ 0.53
SNRPD3-204ENST00000439775 LRFN2Q9ULH4 789 aa18.34■□□□□ 0.53
SNRPD3-204ENST00000439775 CCDC194A0A1B0GVG4 234 aa18.33■□□□□ 0.52
SNRPD3-204ENST00000439775 C9IYK1 514 aa18.33■□□□□ 0.52
SNRPD3-204ENST00000439775 CTDNEP1O95476 244 aa18.33■□□□□ 0.52
SNRPD3-204ENST00000439775 MMP1P03956 469 aa18.33■□□□□ 0.52
SNRPD3-204ENST00000439775 GCFC2P16383 781 aaKnown RBP18.33■□□□□ 0.52
SNRPD3-204ENST00000439775 TARBP2Q15633 366 aaKnown RBP18.33■□□□□ 0.52
SNRPD3-204ENST00000439775 TCEAL5Q5H9L2 206 aa18.33■□□□□ 0.52
SNRPD3-204ENST00000439775 PPP4R3AQ6IN85 833 aa18.33■□□□□ 0.52
SNRPD3-204ENST00000439775 LRRC71Q8N4P6 559 aa18.33■□□□□ 0.52
SNRPD3-204ENST00000439775 WASF1Q92558 559 aa18.33■□□□□ 0.52
SNRPD3-204ENST00000439775 PPP1R16BQ96T49 567 aa18.33■□□□□ 0.52
SNRPD3-204ENST00000439775 ADAMTS10Q9H324 1103 aa18.33■□□□□ 0.52
SNRPD3-204ENST00000439775 AKT3Q9Y243 479 aa18.33■□□□□ 0.52
SNRPD3-204ENST00000439775 PCDHB7Q9Y5E2 793 aa18.33■□□□□ 0.52
SNRPD3-204ENST00000439775 NCOR1O75376 2440 aa18.33■□□□□ 0.52
SNRPD3-204ENST00000439775 BRWD1Q9NSI6 2320 aa18.32■□□□□ 0.52
SNRPD3-204ENST00000439775 WDR81Q562E7 1941 aa18.32■□□□□ 0.52
SNRPD3-204ENST00000439775 GRM6O15303 877 aa18.32■□□□□ 0.52
SNRPD3-204ENST00000439775 SLC37A4O43826 429 aa18.32■□□□□ 0.52
SNRPD3-204ENST00000439775 KCNA5P22460 613 aa18.32■□□□□ 0.52
SNRPD3-204ENST00000439775 NLRP11P59045 1033 aaKnown RBP18.32■□□□□ 0.52
SNRPD3-204ENST00000439775 TBC1D8BQ0IIM8 1120 aa18.32■□□□□ 0.52
SNRPD3-204ENST00000439775 LETM2Q2VYF4 491 aa18.32■□□□□ 0.52
SNRPD3-204ENST00000439775 PAN2Q504Q3 1202 aaKnown RBP18.32■□□□□ 0.52
SNRPD3-204ENST00000439775 XKR3Q5GH77 459 aa18.32■□□□□ 0.52
SNRPD3-204ENST00000439775 NEK8Q86SG6 692 aa18.32■□□□□ 0.52
SNRPD3-204ENST00000439775 NEK9Q8TD19 979 aa18.32■□□□□ 0.52
SNRPD3-204ENST00000439775 PABPC5Q96DU9 382 aaKnown RBP18.32■□□□□ 0.52
SNRPD3-204ENST00000439775 FAM20AQ96MK3 541 aa18.32■□□□□ 0.52
SNRPD3-204ENST00000439775 NAP1L4Q99733 375 aaKnown RBP18.32■□□□□ 0.52
SNRPD3-204ENST00000439775 NIFKQ9BYG3 293 aaKnown RBP18.32■□□□□ 0.52
SNRPD3-204ENST00000439775 KCNMB3Q9NPA1 279 aa18.32■□□□□ 0.52
SNRPD3-204ENST00000439775 ORC3Q9UBD5 711 aaPredicted RBP18.32■□□□□ 0.52
SNRPD3-204ENST00000439775 NCK2O43639 380 aa18.31■□□□□ 0.52
SNRPD3-204ENST00000439775 EIF4BP23588 611 aaKnown RBP18.31■□□□□ 0.52
SNRPD3-204ENST00000439775 GPC3P51654 580 aa18.31■□□□□ 0.52
SNRPD3-204ENST00000439775 PPP2R5CQ13362 524 aa18.31■□□□□ 0.52
SNRPD3-204ENST00000439775 DSC3Q14574 896 aa18.31■□□□□ 0.52
SNRPD3-204ENST00000439775 GTF3C6Q969F1 213 aa18.31■□□□□ 0.52
SNRPD3-204ENST00000439775 CEP89Q96ST8 783 aa18.31■□□□□ 0.52
SNRPD3-204ENST00000439775 ELAC1Q9H777 363 aaKnown RBP18.31■□□□□ 0.52
SNRPD3-204ENST00000439775 TMEM161AQ9NX61 479 aa18.31■□□□□ 0.52
SNRPD3-204ENST00000439775 SEPT9Q9UHD8 586 aaPredicted RBP18.31■□□□□ 0.52
SNRPD3-204ENST00000439775 VAV3Q9UKW4 847 aa18.31■□□□□ 0.52
SNRPD3-204ENST00000439775 PLAGL2Q9UPG8 496 aa18.31■□□□□ 0.52
SNRPD3-204ENST00000439775 EVPLQ92817 2033 aa18.31■□□□□ 0.52
SNRPD3-204ENST00000439775 TCF20Q9UGU0 1960 aaKnown RBP18.3■□□□□ 0.52
SNRPD3-204ENST00000439775 IGKV6-21A0A0C4DH24 114 aa18.3■□□□□ 0.52
SNRPD3-204ENST00000439775 TBX3O15119 743 aa18.3■□□□□ 0.52
SNRPD3-204ENST00000439775 STBD1O95210 358 aa18.3■□□□□ 0.52
SNRPD3-204ENST00000439775 GATMP50440 423 aa18.3■□□□□ 0.52
SNRPD3-204ENST00000439775 FAM189BP81408 668 aa18.3■□□□□ 0.52
SNRPD3-204ENST00000439775 PUS10Q3MIT2 529 aaKnown RBP18.3■□□□□ 0.52
SNRPD3-204ENST00000439775 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.3■□□□□ 0.52
SNRPD3-204ENST00000439775 OXER1Q8TDS5 423 aa18.3■□□□□ 0.52
SNRPD3-204ENST00000439775 GJB4Q9NTQ9 266 aa18.3■□□□□ 0.52
SNRPD3-204ENST00000439775 KIAA1671Q9BY89 1806 aa18.3■□□□□ 0.52
SNRPD3-204ENST00000439775 ATG2AQ2TAZ0 1938 aa18.29■□□□□ 0.52
SNRPD3-204ENST00000439775 ITGB1P05556 798 aa18.29■□□□□ 0.52
SNRPD3-204ENST00000439775 FDPSP14324 419 aaKnown RBP18.29■□□□□ 0.52
SNRPD3-204ENST00000439775 DARSP14868 501 aaKnown RBP18.29■□□□□ 0.52
SNRPD3-204ENST00000439775 PSMC5P62195 406 aa18.29■□□□□ 0.52
SNRPD3-204ENST00000439775 CDC42EP1Q00587 391 aa18.29■□□□□ 0.52
SNRPD3-204ENST00000439775 CAMK1Q14012 370 aa18.29■□□□□ 0.52
SNRPD3-204ENST00000439775 ME3Q16798 604 aa18.29■□□□□ 0.52
SNRPD3-204ENST00000439775 MTERF2Q49AM1 385 aa18.29■□□□□ 0.52
SNRPD3-204ENST00000439775 PIK3AP1Q6ZUJ8 805 aa18.29■□□□□ 0.52
SNRPD3-204ENST00000439775 ALG13Q9NP73 1137 aaKnown RBP18.29■□□□□ 0.52
SNRPD3-204ENST00000439775 EML1O00423 815 aa18.28■□□□□ 0.52
SNRPD3-204ENST00000439775 CCNT1O60563 726 aaKnown RBP18.28■□□□□ 0.52
SNRPD3-204ENST00000439775 LARGE1O95461 756 aa18.28■□□□□ 0.52
SNRPD3-204ENST00000439775 CTC1Q2NKJ3 1217 aa18.28■□□□□ 0.52
SNRPD3-204ENST00000439775 FAM102BQ5T8I3 360 aa18.28■□□□□ 0.52
SNRPD3-204ENST00000439775 PTCRAQ6ISU1 281 aaPredicted RBP18.28■□□□□ 0.52
SNRPD3-204ENST00000439775 NECAB1Q8N987 351 aa18.28■□□□□ 0.52
SNRPD3-204ENST00000439775 KLHL23Q8NBE8 558 aa18.28■□□□□ 0.52
SNRPD3-204ENST00000439775 NSUN7Q8NE18 718 aaKnown RBP18.28■□□□□ 0.52
SNRPD3-204ENST00000439775 SPPL3Q8TCT6 385 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms