RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 STK17AQ9UEE5 414 aa14.75□□□□□ -0.05
PCNX3-202ENST00000439247 ATF5Q9Y2D1 282 aaPredicted RBP14.75□□□□□ -0.05
PCNX3-202ENST00000439247 IRS2Q9Y4H2 1338 aa14.74□□□□□ -0.05
PCNX3-202ENST00000439247 SPDYE3A6NKU9 549 aa14.74□□□□□ -0.05
PCNX3-202ENST00000439247 DNAJC8O75937 253 aaPredicted RBP14.74□□□□□ -0.05
PCNX3-202ENST00000439247 CLSTN1O94985 981 aa14.74□□□□□ -0.05
PCNX3-202ENST00000439247 TNNI2P48788 182 aa14.74□□□□□ -0.05
PCNX3-202ENST00000439247 KRT79Q5XKE5 535 aa14.74□□□□□ -0.05
PCNX3-202ENST00000439247 SCFD1Q8WVM8 642 aa14.74□□□□□ -0.05
PCNX3-202ENST00000439247 CUL5Q93034 780 aa14.74□□□□□ -0.05
PCNX3-202ENST00000439247 ANKRD2Q9GZV1 360 aa14.74□□□□□ -0.05
PCNX3-202ENST00000439247 KDM4CQ9H3R0 1056 aa14.74□□□□□ -0.05
PCNX3-202ENST00000439247 ATP6V0A4Q9HBG4 840 aa14.74□□□□□ -0.05
PCNX3-202ENST00000439247 KIAA1551Q9HCM1 1747 aa14.74□□□□□ -0.05
PCNX3-202ENST00000439247 FOXO6A8MYZ6 492 aa14.74□□□□□ -0.05
PCNX3-202ENST00000439247 PLTPP55058 493 aa14.74□□□□□ -0.05
PCNX3-202ENST00000439247 HERC4Q5GLZ8 1057 aaPredicted RBP14.74□□□□□ -0.05
PCNX3-202ENST00000439247 DZIP1Q86YF9 867 aaKnown RBP14.74□□□□□ -0.05
PCNX3-202ENST00000439247 CCDC125Q86Z20 511 aa14.74□□□□□ -0.05
PCNX3-202ENST00000439247 CCDC63Q8NA47 563 aa14.74□□□□□ -0.05
PCNX3-202ENST00000439247 RNF25Q96BH1 459 aaPredicted RBP14.74□□□□□ -0.05
PCNX3-202ENST00000439247 TLCD1Q96CP7 247 aa14.74□□□□□ -0.05
PCNX3-202ENST00000439247 CRAMP1Q96RY5 1269 aa14.74□□□□□ -0.05
PCNX3-202ENST00000439247 FMO2Q99518 471 aa14.74□□□□□ -0.05
PCNX3-202ENST00000439247 POLLQ9UGP5 575 aa14.74□□□□□ -0.05
PCNX3-202ENST00000439247 QSER1Q2KHR3 1735 aa14.73□□□□□ -0.05
PCNX3-202ENST00000439247 USP17L5A8MUK1 530 aa14.73□□□□□ -0.05
PCNX3-202ENST00000439247 PPEF1O14829 653 aaPredicted RBP14.73□□□□□ -0.05
PCNX3-202ENST00000439247 RTN2O75298 545 aa14.73□□□□□ -0.05
PCNX3-202ENST00000439247 UCHL3P15374 230 aa14.73□□□□□ -0.05
PCNX3-202ENST00000439247 DCAF17Q5H9S7 520 aaPredicted RBP14.73□□□□□ -0.05
PCNX3-202ENST00000439247 DCAF12L1Q5VU92 463 aa14.73□□□□□ -0.05
PCNX3-202ENST00000439247 FBXO33Q7Z6M2 555 aa14.73□□□□□ -0.05
PCNX3-202ENST00000439247 TACO1Q9BSH4 297 aaKnown RBP14.73□□□□□ -0.05
PCNX3-202ENST00000439247 CCDC113Q9H0I3 377 aa14.73□□□□□ -0.05
PCNX3-202ENST00000439247 NUCKS1Q9H1E3 243 aaKnown RBP14.73□□□□□ -0.05
PCNX3-202ENST00000439247 IKZF4Q9H2S9 585 aa14.73□□□□□ -0.05
PCNX3-202ENST00000439247 SNX24Q9Y343 169 aa14.73□□□□□ -0.05
PCNX3-202ENST00000439247 UPP2O95045 317 aa14.73□□□□□ -0.05
PCNX3-202ENST00000439247 VIMP08670 466 aaKnown RBP14.73□□□□□ -0.05
PCNX3-202ENST00000439247 RASA1P20936 1047 aa14.73□□□□□ -0.05
PCNX3-202ENST00000439247 ABCB4P21439 1286 aa14.73□□□□□ -0.05
PCNX3-202ENST00000439247 GNA11P29992 359 aa14.73□□□□□ -0.05
PCNX3-202ENST00000439247 LRRC14Q15048 493 aa14.73□□□□□ -0.05
PCNX3-202ENST00000439247 DPY19L2P1Q6NXN4 242 aa14.73□□□□□ -0.05
PCNX3-202ENST00000439247 CLEC10AQ8IUN9 316 aa14.73□□□□□ -0.05
PCNX3-202ENST00000439247 KIF2BQ8N4N8 673 aa14.73□□□□□ -0.05
PCNX3-202ENST00000439247 C3orf20Q8ND61 904 aa14.73□□□□□ -0.05
PCNX3-202ENST00000439247 AGAP11Q8TF27 550 aa14.73□□□□□ -0.05
PCNX3-202ENST00000439247 U2AF1L4Q8WU68 220 aaKnown RBP14.73□□□□□ -0.05
PCNX3-202ENST00000439247 ATXN2LQ8WWM7 1075 aaKnown RBP14.73□□□□□ -0.05
PCNX3-202ENST00000439247 PPP1R9AQ9ULJ8 1098 aa14.73□□□□□ -0.05
PCNX3-202ENST00000439247 UTP11Q9Y3A2 253 aaKnown RBP14.73□□□□□ -0.05
PCNX3-202ENST00000439247 CLGNO14967 610 aa14.72□□□□□ -0.05
PCNX3-202ENST00000439247 UFL1O94874 794 aa14.72□□□□□ -0.05
PCNX3-202ENST00000439247 ANP32DO95626 131 aa14.72□□□□□ -0.05
PCNX3-202ENST00000439247 NPR1P16066 1061 aa14.72□□□□□ -0.05
PCNX3-202ENST00000439247 CCNHP51946 323 aaPredicted RBP14.72□□□□□ -0.05
PCNX3-202ENST00000439247 MTMR3Q13615 1198 aa14.72□□□□□ -0.05
PCNX3-202ENST00000439247 NT5DC3Q86UY8 548 aa14.72□□□□□ -0.05
PCNX3-202ENST00000439247 CCDC50Q8IVM0 306 aa14.72□□□□□ -0.05
PCNX3-202ENST00000439247 MLXIPLQ9NP71 852 aa14.72□□□□□ -0.05
PCNX3-202ENST00000439247 SEC63Q9UGP8 760 aaKnown RBP14.72□□□□□ -0.05
PCNX3-202ENST00000439247 HDAC9Q9UKV0 1011 aa14.72□□□□□ -0.05
PCNX3-202ENST00000439247 LAMB1P07942 1786 aa14.72□□□□□ -0.05
PCNX3-202ENST00000439247 BBOX1O75936 387 aa14.72□□□□□ -0.05
PCNX3-202ENST00000439247 HIBADHP31937 336 aaKnown RBP14.72□□□□□ -0.05
PCNX3-202ENST00000439247 SLC8A1P32418 973 aa14.72□□□□□ -0.05
PCNX3-202ENST00000439247 EIF6P56537 245 aaKnown RBP14.72□□□□□ -0.05
PCNX3-202ENST00000439247 TMEM266Q2M3C6 531 aa14.72□□□□□ -0.05
PCNX3-202ENST00000439247 SPICE1Q8N0Z3 855 aa14.72□□□□□ -0.05
PCNX3-202ENST00000439247 MGARPQ8TDB4 240 aa14.72□□□□□ -0.05
PCNX3-202ENST00000439247 EPS8L3Q8TE67 593 aaKnown RBP14.72□□□□□ -0.05
PCNX3-202ENST00000439247 KIAA1024Q9UPX6 916 aa14.72□□□□□ -0.05
PCNX3-202ENST00000439247 IGSF9BQ9UPX0 1349 aa14.72□□□□□ -0.05
PCNX3-202ENST00000439247 NR2F2P24468 414 aa14.72□□□□□ -0.05
PCNX3-202ENST00000439247 FXR2P51116 673 aaKnown RBP eCLIP14.72□□□□□ -0.051e-6■■■□□ 15
PCNX3-202ENST00000439247 POU5F1Q01860 360 aaKnown RBP14.72□□□□□ -0.05
PCNX3-202ENST00000439247 SLC29A2Q14542 456 aa14.72□□□□□ -0.05
PCNX3-202ENST00000439247 CRYMQ14894 314 aa14.72□□□□□ -0.05
PCNX3-202ENST00000439247 TCERG1LQ5VWI1 586 aa14.72□□□□□ -0.05
PCNX3-202ENST00000439247 MAEAQ7L5Y9 396 aa14.72□□□□□ -0.05
PCNX3-202ENST00000439247 KCTD10Q9H3F6 313 aa14.72□□□□□ -0.05
PCNX3-202ENST00000439247 EMILIN3Q9NT22 766 aa14.72□□□□□ -0.05
PCNX3-202ENST00000439247 DBR1Q9UK59 544 aaKnown RBP14.72□□□□□ -0.05
PCNX3-202ENST00000439247 STXBP5LQ9Y2K9 1186 aa14.72□□□□□ -0.05
PCNX3-202ENST00000439247 POTEB3A0JP26 581 aa14.71□□□□□ -0.05
PCNX3-202ENST00000439247 POTECB2RU33 542 aa14.71□□□□□ -0.05
PCNX3-202ENST00000439247 DDX3XO00571 662 aaKnown RBP eCLIP14.71□□□□□ -0.05
PCNX3-202ENST00000439247 PON1P27169 355 aa14.71□□□□□ -0.05
PCNX3-202ENST00000439247 TMEM119Q4V9L6 283 aa14.71□□□□□ -0.05
PCNX3-202ENST00000439247 POTEBQ6S5H4 581 aa14.71□□□□□ -0.05
PCNX3-202ENST00000439247 FBXO25Q8TCJ0 367 aa14.71□□□□□ -0.05
PCNX3-202ENST00000439247 MAGEC3Q8TD91 643 aa14.71□□□□□ -0.05
PCNX3-202ENST00000439247 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.71□□□□□ -0.05
PCNX3-202ENST00000439247 HAS1Q92839 578 aa14.71□□□□□ -0.05
PCNX3-202ENST00000439247 MASTLQ96GX5 879 aa14.71□□□□□ -0.05
PCNX3-202ENST00000439247 CALR3Q96L12 384 aaKnown RBP14.71□□□□□ -0.05
PCNX3-202ENST00000439247 TRIM6Q9C030 488 aaPredicted RBP14.71□□□□□ -0.05
PCNX3-202ENST00000439247 SEMA4AQ9H3S1 761 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 233.5 ms