RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 LAPTM4BQ86VI4 370 aa12.86□□□□□ -0.35
CSTF3-203ENST00000438862 IQCA1Q86XH1 822 aa12.86□□□□□ -0.35
CSTF3-203ENST00000438862 GPR161Q8N6U8 529 aaKnown RBP12.86□□□□□ -0.35
CSTF3-203ENST00000438862 TNPO1Q92973 898 aaKnown RBP12.86□□□□□ -0.35
CSTF3-203ENST00000438862 ACSF2Q96CM8 615 aaPredicted RBP12.86□□□□□ -0.35
CSTF3-203ENST00000438862 RNF41Q9H4P4 317 aaPredicted RBP12.86□□□□□ -0.35
CSTF3-203ENST00000438862 ERVK-5Q9HDB9 667 aa12.86□□□□□ -0.35
CSTF3-203ENST00000438862 HELLSQ9NRZ9 838 aa12.86□□□□□ -0.35
CSTF3-203ENST00000438862 C1orf112Q9NSG2 853 aa12.86□□□□□ -0.35
CSTF3-203ENST00000438862 ZMYM6O95789 1325 aa12.86□□□□□ -0.35
CSTF3-203ENST00000438862 TRIM6-TRIM34B2RNG4 842 aa12.85□□□□□ -0.35
CSTF3-203ENST00000438862 ZBTB5O15062 677 aa12.85□□□□□ -0.35
CSTF3-203ENST00000438862 PPM1AP35813 382 aa12.85□□□□□ -0.35
CSTF3-203ENST00000438862 SMC1AQ14683 1233 aaKnown RBP12.85□□□□□ -0.35
CSTF3-203ENST00000438862 BMS1Q14692 1282 aaKnown RBP12.85□□□□□ -0.35
CSTF3-203ENST00000438862 ODR4Q5SWX8 454 aa12.85□□□□□ -0.35
CSTF3-203ENST00000438862 C6orf132Q5T0Z8 1188 aa12.85□□□□□ -0.35
CSTF3-203ENST00000438862 FAM102BQ5T8I3 360 aa12.85□□□□□ -0.35
CSTF3-203ENST00000438862 SLC24A5Q71RS6 500 aa12.85□□□□□ -0.35
CSTF3-203ENST00000438862 FCHSD1Q86WN1 690 aa12.85□□□□□ -0.35
CSTF3-203ENST00000438862 SIX5Q8N196 739 aa12.85□□□□□ -0.35
CSTF3-203ENST00000438862 NME8Q8N427 588 aa12.85□□□□□ -0.35
CSTF3-203ENST00000438862 MRPL43Q8N983 215 aaKnown RBP12.85□□□□□ -0.35
CSTF3-203ENST00000438862 PI4K2BQ8TCG2 481 aa12.85□□□□□ -0.35
CSTF3-203ENST00000438862 ZFRQ96KR1 1074 aaKnown RBP12.85□□□□□ -0.35
CSTF3-203ENST00000438862 ZKSCAN3Q9BRR0 538 aa12.85□□□□□ -0.35
CSTF3-203ENST00000438862 CELF4Q9BZC1 486 aaKnown RBP12.85□□□□□ -0.35
CSTF3-203ENST00000438862 FAM49AQ9H0Q0 323 aaPredicted RBP12.85□□□□□ -0.35
CSTF3-203ENST00000438862 TMX1Q9H3N1 280 aa12.85□□□□□ -0.35
CSTF3-203ENST00000438862 CWH43Q9H720 699 aa12.85□□□□□ -0.35
CSTF3-203ENST00000438862 DCTPP1Q9H773 170 aa12.85□□□□□ -0.35
CSTF3-203ENST00000438862 RGS18Q9NS28 235 aa12.85□□□□□ -0.35
CSTF3-203ENST00000438862 DZANK1Q9NVP4 752 aa12.85□□□□□ -0.35
CSTF3-203ENST00000438862 DUSP12Q9UNI6 340 aa12.85□□□□□ -0.35
CSTF3-203ENST00000438862 KDM3AQ9Y4C1 1321 aa12.85□□□□□ -0.35
CSTF3-203ENST00000438862 FANCMQ8IYD8 2048 aa12.84□□□□□ -0.35
CSTF3-203ENST00000438862 OTOGLQ3ZCN5 2332 aa12.84□□□□□ -0.35
CSTF3-203ENST00000438862 DPYSL4O14531 572 aa12.84□□□□□ -0.35
CSTF3-203ENST00000438862 SP4Q02446 784 aa12.84□□□□□ -0.35
CSTF3-203ENST00000438862 SEMA3FQ13275 785 aa12.84□□□□□ -0.35
CSTF3-203ENST00000438862 OTOP3Q7RTS5 596 aa12.84□□□□□ -0.35
CSTF3-203ENST00000438862 DCLK2Q8N568 766 aa12.84□□□□□ -0.35
CSTF3-203ENST00000438862 EXOC6Q8TAG9 804 aa12.84□□□□□ -0.35
CSTF3-203ENST00000438862 SEPT1Q8WYJ6 367 aa12.84□□□□□ -0.35
CSTF3-203ENST00000438862 GLG1Q92896 1179 aa12.84□□□□□ -0.35
CSTF3-203ENST00000438862 MTMR8Q96EF0 704 aa12.84□□□□□ -0.35
CSTF3-203ENST00000438862 SMARCAD1Q9H4L7 1026 aa12.84□□□□□ -0.35
CSTF3-203ENST00000438862 RTEL1Q9NZ71 1219 aa12.84□□□□□ -0.35
CSTF3-203ENST00000438862 WNT16Q9UBV4 365 aa12.84□□□□□ -0.35
CSTF3-203ENST00000438862 DENND3A2RUS2 1198 aa12.83□□□□□ -0.36
CSTF3-203ENST00000438862 C2orf71A6NGG8 1288 aa12.83□□□□□ -0.36
CSTF3-203ENST00000438862 PRR5-ARHGAP8B1AHC4 643 aa12.83□□□□□ -0.36
CSTF3-203ENST00000438862 CLASP2O75122 1294 aaKnown RBP12.83□□□□□ -0.36
CSTF3-203ENST00000438862 ARP10275 920 aa12.83□□□□□ -0.36
CSTF3-203ENST00000438862 IBSPP21815 317 aaPredicted RBP12.83□□□□□ -0.36
CSTF3-203ENST00000438862 ATXN1P54253 815 aaKnown RBP12.83□□□□□ -0.36
CSTF3-203ENST00000438862 HAND2P61296 217 aa12.83□□□□□ -0.36
CSTF3-203ENST00000438862 IGBP1P78318 339 aa12.83□□□□□ -0.36
CSTF3-203ENST00000438862 ARHGAP8P85298 464 aa12.83□□□□□ -0.36
CSTF3-203ENST00000438862 TBC1D8BQ0IIM8 1120 aa12.83□□□□□ -0.36
CSTF3-203ENST00000438862 TMEM62Q0P6H9 643 aa12.83□□□□□ -0.36
CSTF3-203ENST00000438862 NFX1Q12986 1120 aaKnown RBP12.83□□□□□ -0.36
CSTF3-203ENST00000438862 RARS2Q5T160 578 aaKnown RBP12.83□□□□□ -0.36
CSTF3-203ENST00000438862 XRRA1Q6P2D8 792 aa12.83□□□□□ -0.36
CSTF3-203ENST00000438862 KCNT2Q6UVM3 1135 aa12.83□□□□□ -0.36
CSTF3-203ENST00000438862 NLRX1Q86UT6 975 aa12.83□□□□□ -0.36
CSTF3-203ENST00000438862 ADAM2Q99965 735 aa12.83□□□□□ -0.36
CSTF3-203ENST00000438862 ELAC1Q9H777 363 aaKnown RBP12.83□□□□□ -0.36
CSTF3-203ENST00000438862 KCNK12Q9HB15 430 aa12.83□□□□□ -0.36
CSTF3-203ENST00000438862 ATP6V0A4Q9HBG4 840 aa12.83□□□□□ -0.36
CSTF3-203ENST00000438862 TMEM161AQ9NX61 479 aa12.83□□□□□ -0.36
CSTF3-203ENST00000438862 SPG21Q9NZD8 308 aa12.83□□□□□ -0.36
CSTF3-203ENST00000438862 IGSF9Q9P2J2 1179 aa12.83□□□□□ -0.36
CSTF3-203ENST00000438862 SEPT9Q9UHD8 586 aaPredicted RBP12.83□□□□□ -0.36
CSTF3-203ENST00000438862 TELO2Q9Y4R8 837 aa12.83□□□□□ -0.36
CSTF3-203ENST00000438862 PCDHA2Q9Y5H9 948 aa12.83□□□□□ -0.36
CSTF3-203ENST00000438862 FRMPD4Q14CM0 1322 aa12.83□□□□□ -0.36
CSTF3-203ENST00000438862 BAHCC1Q9P281 2608 aa12.82□□□□□ -0.36
CSTF3-203ENST00000438862 GSTTP1A0A1W2PQM5 241 aa12.82□□□□□ -0.36
CSTF3-203ENST00000438862 C9IYK1 514 aa12.82□□□□□ -0.36
CSTF3-203ENST00000438862 PPP1R11O60927 126 aaPredicted RBP12.82□□□□□ -0.36
CSTF3-203ENST00000438862 WEE2P0C1S8 567 aa12.82□□□□□ -0.36
CSTF3-203ENST00000438862 SP9P0CG40 484 aa12.82□□□□□ -0.36
CSTF3-203ENST00000438862 INSRRP14616 1297 aa12.82□□□□□ -0.36
CSTF3-203ENST00000438862 RFX1P22670 979 aa12.82□□□□□ -0.36
CSTF3-203ENST00000438862 MARK3P27448 753 aa12.82□□□□□ -0.36
CSTF3-203ENST00000438862 KRT76Q01546 638 aa12.82□□□□□ -0.36
CSTF3-203ENST00000438862 MCMDC2Q4G0Z9 681 aa12.82□□□□□ -0.36
CSTF3-203ENST00000438862 SUMF1Q8NBK3 374 aa12.82□□□□□ -0.36
CSTF3-203ENST00000438862 RIN2Q8WYP3 895 aaPredicted RBP12.82□□□□□ -0.36
CSTF3-203ENST00000438862 ZNF558Q96NG5 402 aa12.82□□□□□ -0.36
CSTF3-203ENST00000438862 ZSCAN10Q96SZ4 725 aaPredicted RBP12.82□□□□□ -0.36
CSTF3-203ENST00000438862 EPAS1Q99814 870 aa12.82□□□□□ -0.36
CSTF3-203ENST00000438862 TMEM117Q9H0C3 514 aa12.82□□□□□ -0.36
CSTF3-203ENST00000438862 CHD6Q8TD26 2715 aa12.82□□□□□ -0.36
CSTF3-203ENST00000438862 SMIM35A0A1B0GVV1 85 aa12.81□□□□□ -0.36
CSTF3-203ENST00000438862 KLRF2D3W0D1 207 aa12.81□□□□□ -0.36
CSTF3-203ENST00000438862 HOXA2O43364 376 aa12.81□□□□□ -0.36
CSTF3-203ENST00000438862 MGEA5O60502 916 aa12.81□□□□□ -0.36
CSTF3-203ENST00000438862 KINO60870 393 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms