RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 C4orf19Q8IY42 314 aa27.72■■■□□ 2.03
RAPGEF1-206ENST00000438647 NEK9Q8TD19 979 aa27.72■■■□□ 2.03
RAPGEF1-206ENST00000438647 YME1L1Q96TA2 773 aa27.72■■■□□ 2.03
RAPGEF1-206ENST00000438647 ZSWIM4Q9H7M6 989 aa27.72■■■□□ 2.03
RAPGEF1-206ENST00000438647 LCHNA4D1U4 455 aa27.71■■■□□ 2.03
RAPGEF1-206ENST00000438647 RBAK-RBAKDNI3L0D1 243 aa27.71■■■□□ 2.03
RAPGEF1-206ENST00000438647 ENPP3O14638 875 aa27.71■■■□□ 2.03
RAPGEF1-206ENST00000438647 UPP2O95045 317 aa27.71■■■□□ 2.03
RAPGEF1-206ENST00000438647 U2AF2P26368 475 aaKnown RBP eCLIP27.71■■■□□ 2.032e-7■□□□□ 8.7
RAPGEF1-206ENST00000438647 DNM2P50570 870 aa27.71■■■□□ 2.03
RAPGEF1-206ENST00000438647 CDC42EP1Q00587 391 aa27.71■■■□□ 2.03
RAPGEF1-206ENST00000438647 EXOC8Q8IYI6 725 aa27.71■■■□□ 2.03
RAPGEF1-206ENST00000438647 MAFAQ8NHW3 353 aaPredicted RBP27.71■■■□□ 2.03
RAPGEF1-206ENST00000438647 OSMRQ99650 979 aa27.71■■■□□ 2.03
RAPGEF1-206ENST00000438647 SMC3Q9UQE7 1217 aa27.71■■■□□ 2.03
RAPGEF1-206ENST00000438647 GPR182O15218 404 aa27.7■■■□□ 2.02
RAPGEF1-206ENST00000438647 GPR32O75388 356 aa27.7■■■□□ 2.02
RAPGEF1-206ENST00000438647 GJB2P29033 226 aa27.7■■■□□ 2.02
RAPGEF1-206ENST00000438647 NLRP11P59045 1033 aaKnown RBP27.7■■■□□ 2.02
RAPGEF1-206ENST00000438647 NFX1Q12986 1120 aaKnown RBP27.7■■■□□ 2.02
RAPGEF1-206ENST00000438647 TTC38Q5R3I4 469 aa27.7■■■□□ 2.02
RAPGEF1-206ENST00000438647 OTUD6AQ7L8S5 288 aa27.7■■■□□ 2.02
RAPGEF1-206ENST00000438647 DYDC2Q96IM9 177 aa27.7■■■□□ 2.02
RAPGEF1-206ENST00000438647 PPP1R16BQ96T49 567 aa27.7■■■□□ 2.02
RAPGEF1-206ENST00000438647 CDHR5Q9HBB8 845 aa27.7■■■□□ 2.02
RAPGEF1-206ENST00000438647 CYP26B1Q9NR63 512 aa27.7■■■□□ 2.02
RAPGEF1-206ENST00000438647 RGL1Q9NZL6 768 aa27.7■■■□□ 2.02
RAPGEF1-206ENST00000438647 IGKV6-21A0A0C4DH24 114 aa27.69■■■□□ 2.02
RAPGEF1-206ENST00000438647 TMEM150BA6NC51 233 aa27.69■■■□□ 2.02
RAPGEF1-206ENST00000438647 CYP4A11Q02928 519 aa27.69■■■□□ 2.02
RAPGEF1-206ENST00000438647 CEP89Q96ST8 783 aa27.69■■■□□ 2.02
RAPGEF1-206ENST00000438647 EIF2AK1Q9BQI3 630 aaKnown RBP27.69■■■□□ 2.02
RAPGEF1-206ENST00000438647 TSPYL2Q9H2G4 693 aaPredicted RBP27.69■■■□□ 2.02
RAPGEF1-206ENST00000438647 TMEM60Q9H2L4 133 aa27.69■■■□□ 2.02
RAPGEF1-206ENST00000438647 NOC2LQ9Y3T9 749 aaKnown RBP27.69■■■□□ 2.02
RAPGEF1-206ENST00000438647 H3BQV1 296 aa27.68■■■□□ 2.02
RAPGEF1-206ENST00000438647 MAFO75444 373 aaPredicted RBP27.68■■■□□ 2.02
RAPGEF1-206ENST00000438647 ARHGEF15O94989 841 aa27.68■■■□□ 2.02
RAPGEF1-206ENST00000438647 YWHABP31946 246 aaKnown RBP27.68■■■□□ 2.02
RAPGEF1-206ENST00000438647 ZNF174Q15697 407 aa27.68■■■□□ 2.02
RAPGEF1-206ENST00000438647 TMEM266Q2M3C6 531 aa27.68■■■□□ 2.02
RAPGEF1-206ENST00000438647 PLA2G4FQ68DD2 849 aa27.68■■■□□ 2.02
RAPGEF1-206ENST00000438647 TPH2Q8IWU9 490 aa27.68■■■□□ 2.02
RAPGEF1-206ENST00000438647 TMEM40Q8WWA1 233 aa27.68■■■□□ 2.02
RAPGEF1-206ENST00000438647 SLC7A3Q8WY07 619 aa27.68■■■□□ 2.02
RAPGEF1-206ENST00000438647 ARNTL2Q8WYA1 636 aa27.68■■■□□ 2.02
RAPGEF1-206ENST00000438647 CEP170P1Q96L14 293 aa27.68■■■□□ 2.02
RAPGEF1-206ENST00000438647 SCLT1Q96NL6 688 aa27.68■■■□□ 2.02
RAPGEF1-206ENST00000438647 TGS1Q96RS0 853 aaKnown RBP27.68■■■□□ 2.02
RAPGEF1-206ENST00000438647 SH2D3AQ9BRG2 576 aa27.68■■■□□ 2.02
RAPGEF1-206ENST00000438647 CERS4Q9HA82 394 aa27.68■■■□□ 2.02
RAPGEF1-206ENST00000438647 ERVK-5Q9HDB9 667 aa27.68■■■□□ 2.02
RAPGEF1-206ENST00000438647 WRAP73Q9P2S5 460 aaPredicted RBP27.68■■■□□ 2.02
RAPGEF1-206ENST00000438647 LINC01553A4QN01 128 aa27.67■■■□□ 2.02
RAPGEF1-206ENST00000438647 OR52Z1P0C646 297 aa27.67■■■□□ 2.02
RAPGEF1-206ENST00000438647 GPC3P51654 580 aa27.67■■■□□ 2.02
RAPGEF1-206ENST00000438647 CTTNQ14247 550 aaKnown RBP27.67■■■□□ 2.02
RAPGEF1-206ENST00000438647 SP7Q8TDD2 431 aaPredicted RBP27.67■■■□□ 2.02
RAPGEF1-206ENST00000438647 HSD17B14Q9BPX1 270 aa27.67■■■□□ 2.02
RAPGEF1-206ENST00000438647 ADAMTS10Q9H324 1103 aa27.67■■■□□ 2.02
RAPGEF1-206ENST00000438647 RNF216Q9NWF9 866 aaPredicted RBP27.67■■■□□ 2.02
RAPGEF1-206ENST00000438647 ST3GAL5Q9UNP4 418 aa27.67■■■□□ 2.02
RAPGEF1-206ENST00000438647 LOXHD1Q8IVV2 1947 aa27.67■■■□□ 2.02
RAPGEF1-206ENST00000438647 EYSQ5T1H1 3165 aa27.66■■■□□ 2.02
RAPGEF1-206ENST00000438647 SLITRK3O94933 977 aa27.66■■■□□ 2.02
RAPGEF1-206ENST00000438647 IGFBP4P22692 258 aa27.66■■■□□ 2.02
RAPGEF1-206ENST00000438647 EIF4BP23588 611 aaKnown RBP27.66■■■□□ 2.02
RAPGEF1-206ENST00000438647 RFC5P40937 340 aa27.66■■■□□ 2.02
RAPGEF1-206ENST00000438647 POLGP54098 1239 aaPredicted RBP27.66■■■□□ 2.02
RAPGEF1-206ENST00000438647 MCTP1Q6DN14 999 aa27.66■■■□□ 2.02
RAPGEF1-206ENST00000438647 NLRP7Q8WX94 980 aa27.66■■■□□ 2.02
RAPGEF1-206ENST00000438647 LINC01599Q8WXQ3 324 aa27.66■■■□□ 2.02
RAPGEF1-206ENST00000438647 TMX1Q9H3N1 280 aa27.66■■■□□ 2.02
RAPGEF1-206ENST00000438647 DENND3A2RUS2 1198 aa27.65■■■□□ 2.02
RAPGEF1-206ENST00000438647 LYPLA2O95372 231 aa27.65■■■□□ 2.02
RAPGEF1-206ENST00000438647 STAG3L1P0CL83 205 aa27.65■■■□□ 2.02
RAPGEF1-206ENST00000438647 NPEPPSP55786 919 aa27.65■■■□□ 2.02
RAPGEF1-206ENST00000438647 ERVK-21P61565 698 aa27.65■■■□□ 2.02
RAPGEF1-206ENST00000438647 ADGRE1Q14246 886 aa27.65■■■□□ 2.02
RAPGEF1-206ENST00000438647 FAM228AQ86W67 206 aa27.65■■■□□ 2.02
RAPGEF1-206ENST00000438647 C1orf112Q9NSG2 853 aa27.65■■■□□ 2.02
RAPGEF1-206ENST00000438647 TTC3P53804 2025 aa27.65■■■□□ 2.02
RAPGEF1-206ENST00000438647 POTEMA6NI47 508 aa27.64■■■□□ 2.02
RAPGEF1-206ENST00000438647 GTPBP6O43824 516 aaPredicted RBP27.64■■■□□ 2.02
RAPGEF1-206ENST00000438647 GAS2O43903 313 aaKnown RBP27.64■■■□□ 2.02
RAPGEF1-206ENST00000438647 DRP2Q13474 957 aa27.64■■■□□ 2.02
RAPGEF1-206ENST00000438647 RTN4RL1Q86UN2 441 aaPredicted RBP27.64■■■□□ 2.02
RAPGEF1-206ENST00000438647 NPAS4Q8IUM7 802 aa27.64■■■□□ 2.02
RAPGEF1-206ENST00000438647 ERMNQ8TAM6 284 aa27.64■■■□□ 2.02
RAPGEF1-206ENST00000438647 SAMD11Q96NU1 681 aa27.64■■■□□ 2.02
RAPGEF1-206ENST00000438647 DHX33Q9H6R0 707 aaKnown RBP27.64■■■□□ 2.02
RAPGEF1-206ENST00000438647 SUCLA2Q9P2R7 463 aaPredicted RBP27.64■■■□□ 2.02
RAPGEF1-206ENST00000438647 COL4A6Q14031 1691 aa27.64■■■□□ 2.02
RAPGEF1-206ENST00000438647 TECP42680 631 aa27.63■■■□□ 2.01
RAPGEF1-206ENST00000438647 XKR9Q5GH70 373 aa27.63■■■□□ 2.01
RAPGEF1-206ENST00000438647 ZNF410Q86VK4 478 aa27.63■■■□□ 2.01
RAPGEF1-206ENST00000438647 CCDC43Q96MW1 224 aaKnown RBP27.63■■■□□ 2.01
RAPGEF1-206ENST00000438647 GCOM2Q9BZD3 368 aaPredicted RBP27.63■■■□□ 2.01
RAPGEF1-206ENST00000438647 ANKEF1Q9NU02 776 aa27.63■■■□□ 2.01
RAPGEF1-206ENST00000438647 DARSP14868 501 aaKnown RBP27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms