RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 MAP2K7O14733 419 aa10.38□□□□□ -0.75
CUX1-206ENST00000437600 PALMO75781 387 aa10.38□□□□□ -0.75
CUX1-206ENST00000437600 MYCLP12524 364 aaPredicted RBP10.38□□□□□ -0.75
CUX1-206ENST00000437600 CYP3A7P24462 503 aa10.38□□□□□ -0.75
CUX1-206ENST00000437600 CYP2J2P51589 502 aa10.38□□□□□ -0.75
CUX1-206ENST00000437600 USP14P54578 494 aa10.38□□□□□ -0.75
CUX1-206ENST00000437600 MAP3K10Q02779 954 aa10.38□□□□□ -0.75
CUX1-206ENST00000437600 PTK2Q05397 1052 aa10.38□□□□□ -0.75
CUX1-206ENST00000437600 RINT1Q6NUQ1 792 aa10.38□□□□□ -0.75
CUX1-206ENST00000437600 OTOP1Q7RTM1 612 aa10.38□□□□□ -0.75
CUX1-206ENST00000437600 SYT2Q8N9I0 419 aaPredicted RBP10.38□□□□□ -0.75
CUX1-206ENST00000437600 SPAG5Q96R06 1193 aa10.38□□□□□ -0.75
CUX1-206ENST00000437600 WDR11Q9BZH6 1224 aa10.38□□□□□ -0.75
CUX1-206ENST00000437600 PCIF1Q9H4Z3 704 aa10.38□□□□□ -0.75
CUX1-206ENST00000437600 ELP3Q9H9T3 547 aa10.38□□□□□ -0.75
CUX1-206ENST00000437600 ARMCX3Q9UH62 379 aaPredicted RBP10.38□□□□□ -0.75
CUX1-206ENST00000437600 RAB21Q9UL25 225 aa10.38□□□□□ -0.75
CUX1-206ENST00000437600 MRPL11Q9Y3B7 192 aaKnown RBP10.38□□□□□ -0.75
CUX1-206ENST00000437600 CTDP1Q9Y5B0 961 aaPredicted RBP10.38□□□□□ -0.75
CUX1-206ENST00000437600 DOCK1Q14185 1865 aa10.38□□□□□ -0.75
CUX1-206ENST00000437600 RBAK-RBAKDNI3L0D1 243 aa10.38□□□□□ -0.75
CUX1-206ENST00000437600 CTNND1O60716 968 aaKnown RBP10.38□□□□□ -0.75
CUX1-206ENST00000437600 TACC1O75410 805 aa10.38□□□□□ -0.75
CUX1-206ENST00000437600 SLC9C1Q4G0N8 1177 aa10.38□□□□□ -0.75
CUX1-206ENST00000437600 USP50Q70EL3 339 aaPredicted RBP10.38□□□□□ -0.75
CUX1-206ENST00000437600 HDXQ7Z353 690 aa10.38□□□□□ -0.75
CUX1-206ENST00000437600 ZSWIM2Q8NEG5 633 aa10.38□□□□□ -0.75
CUX1-206ENST00000437600 OSBPL9Q96SU4 736 aa10.38□□□□□ -0.75
CUX1-206ENST00000437600 TLR10Q9BXR5 811 aa10.38□□□□□ -0.75
CUX1-206ENST00000437600 VAV3Q9UKW4 847 aa10.38□□□□□ -0.75
CUX1-206ENST00000437600 SAMM50Q9Y512 469 aa10.38□□□□□ -0.75
CUX1-206ENST00000437600 SCN4AP35499 1836 aa10.38□□□□□ -0.75
CUX1-206ENST00000437600 A0A1W2PQJ5 194 aa10.37□□□□□ -0.75
CUX1-206ENST00000437600 ITGB5P18084 799 aa10.37□□□□□ -0.75
CUX1-206ENST00000437600 PTPRAP18433 802 aa10.37□□□□□ -0.75
CUX1-206ENST00000437600 NOP2P46087 812 aaKnown RBP10.37□□□□□ -0.75
CUX1-206ENST00000437600 RPS6P62753 249 aaKnown RBP10.37□□□□□ -0.75
CUX1-206ENST00000437600 ASTE1Q2TB18 679 aaPredicted RBP10.37□□□□□ -0.75
CUX1-206ENST00000437600 CEP55Q53EZ4 464 aa10.37□□□□□ -0.75
CUX1-206ENST00000437600 HAUS3Q68CZ6 603 aa10.37□□□□□ -0.75
CUX1-206ENST00000437600 FAM160B2Q86V87 743 aa10.37□□□□□ -0.75
CUX1-206ENST00000437600 RBM46Q8TBY0 533 aaKnown RBP10.37□□□□□ -0.75
CUX1-206ENST00000437600 OTUD5Q96G74 571 aa10.37□□□□□ -0.75
CUX1-206ENST00000437600 LRRC27Q9C0I9 530 aa10.37□□□□□ -0.75
CUX1-206ENST00000437600 PICK1Q9NRD5 415 aa10.37□□□□□ -0.75
CUX1-206ENST00000437600 SNX12Q9UMY4 172 aa10.37□□□□□ -0.75
CUX1-206ENST00000437600 KDM3AQ9Y4C1 1321 aa10.37□□□□□ -0.75
CUX1-206ENST00000437600 IQCA1LA6NCM1 817 aa10.37□□□□□ -0.75
CUX1-206ENST00000437600 GAS7O60861 476 aa10.37□□□□□ -0.75
CUX1-206ENST00000437600 ICAM1P05362 532 aa10.37□□□□□ -0.75
CUX1-206ENST00000437600 TRIM49P0CI25 452 aa10.37□□□□□ -0.75
CUX1-206ENST00000437600 TRIM49CP0CI26 452 aa10.37□□□□□ -0.75
CUX1-206ENST00000437600 PPP1R2P41236 205 aa10.37□□□□□ -0.75
CUX1-206ENST00000437600 SP4Q02446 784 aa10.37□□□□□ -0.75
CUX1-206ENST00000437600 Q4G0T1 1027 aa10.37□□□□□ -0.75
CUX1-206ENST00000437600 FIGNQ5HY92 759 aa10.37□□□□□ -0.75
CUX1-206ENST00000437600 HYIQ5T013 277 aa10.37□□□□□ -0.75
CUX1-206ENST00000437600 CCDC181Q5TID7 509 aa10.37□□□□□ -0.75
CUX1-206ENST00000437600 KLHDC7AQ5VTJ3 777 aa10.37□□□□□ -0.75
CUX1-206ENST00000437600 DCAF15Q66K64 600 aa10.37□□□□□ -0.75
CUX1-206ENST00000437600 SPATA4Q8NEY3 305 aa10.37□□□□□ -0.75
CUX1-206ENST00000437600 FAM84AQ96KN4 292 aa10.37□□□□□ -0.75
CUX1-206ENST00000437600 MBOAT7Q96N66 472 aa10.37□□□□□ -0.75
CUX1-206ENST00000437600 TAAR1Q96RJ0 339 aa10.37□□□□□ -0.75
CUX1-206ENST00000437600 ZNF577Q9BSK1 485 aa10.37□□□□□ -0.75
CUX1-206ENST00000437600 RBM12Q9NTZ6 932 aaKnown RBP10.37□□□□□ -0.75
CUX1-206ENST00000437600 JRKLQ9Y4A0 524 aa10.37□□□□□ -0.75
CUX1-206ENST00000437600 PIK3CDO00329 1044 aa10.36□□□□□ -0.75
CUX1-206ENST00000437600 WDR46O15213 610 aaKnown RBP10.36□□□□□ -0.75
CUX1-206ENST00000437600 TGFB1I1O43294 461 aa10.36□□□□□ -0.75
CUX1-206ENST00000437600 TBCAO75347 108 aaKnown RBP10.36□□□□□ -0.75
CUX1-206ENST00000437600 ERLIN1O75477 346 aa10.36□□□□□ -0.75
CUX1-206ENST00000437600 UCHL3P15374 230 aa10.36□□□□□ -0.75
CUX1-206ENST00000437600 PON1P27169 355 aa10.36□□□□□ -0.75
CUX1-206ENST00000437600 SUPT20HL1Q3ZLR7 823 aa10.36□□□□□ -0.75
CUX1-206ENST00000437600 COBLL1Q53SF7 1204 aa10.36□□□□□ -0.75
CUX1-206ENST00000437600 ZNF571Q7Z3V5 609 aaPredicted RBP10.36□□□□□ -0.75
CUX1-206ENST00000437600 SCYL3Q8IZE3 742 aa10.36□□□□□ -0.75
CUX1-206ENST00000437600 TRIM58Q8NG06 486 aa10.36□□□□□ -0.75
CUX1-206ENST00000437600 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.36□□□□□ -0.756e-12■■■■■ 36.6
CUX1-206ENST00000437600 ERMNQ8TAM6 284 aa10.36□□□□□ -0.75
CUX1-206ENST00000437600 CLEC4DQ8WXI8 215 aa10.36□□□□□ -0.75
CUX1-206ENST00000437600 HSD17B14Q9BPX1 270 aa10.36□□□□□ -0.75
CUX1-206ENST00000437600 PLCD4Q9BRC7 762 aa10.36□□□□□ -0.75
CUX1-206ENST00000437600 KIAA1683Q9H0B3 1180 aa10.36□□□□□ -0.75
CUX1-206ENST00000437600 PHIPQ8WWQ0 1821 aa10.36□□□□□ -0.75
CUX1-206ENST00000437600 TULP2O00295 520 aa10.36□□□□□ -0.75
CUX1-206ENST00000437600 NR3C1P04150 777 aa10.36□□□□□ -0.75
CUX1-206ENST00000437600 XRCC5P13010 732 aaKnown RBP10.36□□□□□ -0.75
CUX1-206ENST00000437600 HNRNPH3P31942 346 aaKnown RBP10.36□□□□□ -0.75
CUX1-206ENST00000437600 HNRNPH2P55795 449 aaKnown RBP10.36□□□□□ -0.75
CUX1-206ENST00000437600 SLC20A2Q08357 652 aa10.36□□□□□ -0.75
CUX1-206ENST00000437600 EXOC3L4Q17RC7 722 aa10.36□□□□□ -0.75
CUX1-206ENST00000437600 DNAJC21Q5F1R6 531 aaKnown RBP10.36□□□□□ -0.75
CUX1-206ENST00000437600 IFT81Q8WYA0 676 aa10.36□□□□□ -0.75
CUX1-206ENST00000437600 UBXN6Q9BZV1 441 aa10.36□□□□□ -0.75
CUX1-206ENST00000437600 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.36□□□□□ -0.75
CUX1-206ENST00000437600 ANKRD65E5RJM6 399 aa10.36□□□□□ -0.75
CUX1-206ENST00000437600 IPO5O00410 1097 aaKnown RBP10.36□□□□□ -0.75
CUX1-206ENST00000437600 PPP1R12BO60237 982 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms