RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 THEGQ9P2T0 379 aa17.02■□□□□ 0.31
PTPN13-204ENST00000436978 KIAA1755Q5JYT7 1200 aa17.01■□□□□ 0.31
PTPN13-204ENST00000436978 TWF2Q6IBS0 349 aaKnown RBP17.01■□□□□ 0.31
PTPN13-204ENST00000436978 XXYLT1Q8NBI6 393 aa17.01■□□□□ 0.31
PTPN13-204ENST00000436978 CHMP6Q96FZ7 201 aa17.01■□□□□ 0.31
PTPN13-204ENST00000436978 EFHD1Q9BUP0 239 aa17.01■□□□□ 0.31
PTPN13-204ENST00000436978 LY9Q9HBG7 655 aa17.01■□□□□ 0.31
PTPN13-204ENST00000436978 PPLO60437 1756 aa17.01■□□□□ 0.31
PTPN13-204ENST00000436978 EXOC1LA0A1B0GW35 172 aa17.01■□□□□ 0.31
PTPN13-204ENST00000436978 TAC1P20366 129 aa17.01■□□□□ 0.31
PTPN13-204ENST00000436978 FTOQ9C0B1 505 aaKnown RBP eCLIP17.01■□□□□ 0.31
PTPN13-204ENST00000436978 ATP8A1Q9Y2Q0 1164 aa17.01■□□□□ 0.31
PTPN13-204ENST00000436978 SPDYE2BA6NHP3 402 aa17.01■□□□□ 0.31
PTPN13-204ENST00000436978 SOWAHDA6NJG2 315 aa17.01■□□□□ 0.31
PTPN13-204ENST00000436978 ENC1O14682 589 aa17.01■□□□□ 0.31
PTPN13-204ENST00000436978 NVLO15381 856 aaKnown RBP17.01■□□□□ 0.31
PTPN13-204ENST00000436978 MT-ND3P03897 115 aa17.01■□□□□ 0.31
PTPN13-204ENST00000436978 SPDYE6P0CI01 402 aa17.01■□□□□ 0.31
PTPN13-204ENST00000436978 CFAP61Q8NHU2 1237 aa17.01■□□□□ 0.31
PTPN13-204ENST00000436978 PPP1R16BQ96T49 567 aa17.01■□□□□ 0.31
PTPN13-204ENST00000436978 PPFIA2O75334 1257 aa17.01■□□□□ 0.31
PTPN13-204ENST00000436978 BAG2O95816 211 aa17.01■□□□□ 0.31
PTPN13-204ENST00000436978 MYBL1P10243 752 aa17.01■□□□□ 0.31
PTPN13-204ENST00000436978 GSTA4O15217 222 aa17.01■□□□□ 0.31
PTPN13-204ENST00000436978 SLC26A4O43511 780 aa17.01■□□□□ 0.31
PTPN13-204ENST00000436978 SLC4A1P02730 911 aa17.01■□□□□ 0.31
PTPN13-204ENST00000436978 NR3C1P04150 777 aa17.01■□□□□ 0.31
PTPN13-204ENST00000436978 SOX5P35711 763 aa17.01■□□□□ 0.31
PTPN13-204ENST00000436978 NOP9Q86U38 636 aaKnown RBP17.01■□□□□ 0.31
PTPN13-204ENST00000436978 ACAD9Q9H845 621 aa17.01■□□□□ 0.31
PTPN13-204ENST00000436978 PADI6Q6TGC4 694 aa17.01■□□□□ 0.31
PTPN13-204ENST00000436978 PSPC1Q8WXF1 523 aaKnown RBP17.01■□□□□ 0.31
PTPN13-204ENST00000436978 TRIM15Q9C019 465 aa17.01■□□□□ 0.31
PTPN13-204ENST00000436978 CAPN7Q9Y6W3 813 aa17.01■□□□□ 0.31
PTPN13-204ENST00000436978 UBN2Q6ZU65 1347 aa17.01■□□□□ 0.31
PTPN13-204ENST00000436978 AP3M2P53677 418 aa17.01■□□□□ 0.31
PTPN13-204ENST00000436978 PLTPP55058 493 aa17.01■□□□□ 0.31
PTPN13-204ENST00000436978 CAV1Q03135 178 aa17.01■□□□□ 0.31
PTPN13-204ENST00000436978 SNAP25P60880 206 aa17■□□□□ 0.31
PTPN13-204ENST00000436978 PPARDQ03181 441 aa17■□□□□ 0.31
PTPN13-204ENST00000436978 ADCY2Q08462 1091 aa17■□□□□ 0.31
PTPN13-204ENST00000436978 GPR101Q96P66 508 aaPredicted RBP17■□□□□ 0.31
PTPN13-204ENST00000436978 TIPINQ9BVW5 301 aa17■□□□□ 0.31
PTPN13-204ENST00000436978 TXLNGQ9NUQ3 528 aa17■□□□□ 0.31
PTPN13-204ENST00000436978 OPHN1O60890 802 aa17■□□□□ 0.31
PTPN13-204ENST00000436978 KRT31Q15323 416 aa17■□□□□ 0.31
PTPN13-204ENST00000436978 LRRC31Q6UY01 552 aa17■□□□□ 0.31
PTPN13-204ENST00000436978 PDIK1LQ8N165 341 aa17■□□□□ 0.31
PTPN13-204ENST00000436978 FSD1LQ9BXM9 530 aa17■□□□□ 0.31
PTPN13-204ENST00000436978 ANKRD13CQ8N6S4 541 aa17■□□□□ 0.31
PTPN13-204ENST00000436978 FRA10AC1Q70Z53 315 aa17■□□□□ 0.31
PTPN13-204ENST00000436978 PIGOQ8TEQ8 1089 aa17■□□□□ 0.31
PTPN13-204ENST00000436978 PDE11AQ9HCR9 933 aa17■□□□□ 0.31
PTPN13-204ENST00000436978 PLS3P13797 630 aa17■□□□□ 0.31
PTPN13-204ENST00000436978 CDC42EP1Q00587 391 aa17■□□□□ 0.31
PTPN13-204ENST00000436978 ADGRF4Q8IZF3 695 aa17■□□□□ 0.31
PTPN13-204ENST00000436978 DCLK2Q8N568 766 aa17■□□□□ 0.31
PTPN13-204ENST00000436978 ENAHQ8N8S7 591 aaPredicted RBP17■□□□□ 0.31
PTPN13-204ENST00000436978 DDX27Q96GQ7 796 aaKnown RBP17■□□□□ 0.31
PTPN13-204ENST00000436978 RECQLP46063 649 aaPredicted RBP17■□□□□ 0.31
PTPN13-204ENST00000436978 USP11P51784 963 aa17■□□□□ 0.31
PTPN13-204ENST00000436978 TAF1BQ53T94 588 aaPredicted RBP17■□□□□ 0.31
PTPN13-204ENST00000436978 C6orf118Q5T5N4 469 aa17■□□□□ 0.31
PTPN13-204ENST00000436978 SAMSN1Q9NSI8 373 aaKnown RBP17■□□□□ 0.31
PTPN13-204ENST00000436978 JCADQ9P266 1359 aa17■□□□□ 0.31
PTPN13-204ENST00000436978 GLE1Q53GS7 698 aaKnown RBP17■□□□□ 0.31
PTPN13-204ENST00000436978 SPDYE1Q8NFV5 336 aaPredicted RBP17■□□□□ 0.31
PTPN13-204ENST00000436978 BCAS4Q8TDM0 211 aa17■□□□□ 0.31
PTPN13-204ENST00000436978 MICAL1Q8TDZ2 1067 aa17■□□□□ 0.31
PTPN13-204ENST00000436978 PYROXD1Q8WU10 500 aa17■□□□□ 0.31
PTPN13-204ENST00000436978 QARSP47897 775 aaKnown RBP16.99■□□□□ 0.31
PTPN13-204ENST00000436978 ARHGEF1Q92888 912 aaKnown RBP16.99■□□□□ 0.31
PTPN13-204ENST00000436978 ZMYND12Q9H0C1 365 aa16.99■□□□□ 0.31
PTPN13-204ENST00000436978 RAVER2Q9HCJ3 691 aaKnown RBP16.99■□□□□ 0.31
PTPN13-204ENST00000436978 DIP2CQ9Y2E4 1556 aa16.99■□□□□ 0.31
PTPN13-204ENST00000436978 MIF4GDA9UHW6 222 aaKnown RBP16.99■□□□□ 0.31
PTPN13-204ENST00000436978 CLGNO14967 610 aa16.99■□□□□ 0.31
PTPN13-204ENST00000436978 TRIM72Q6ZMU5 477 aa16.99■□□□□ 0.31
PTPN13-204ENST00000436978 ENOSF1Q7L5Y1 443 aa16.99■□□□□ 0.31
PTPN13-204ENST00000436978 GCOM2Q9BZD3 368 aaPredicted RBP16.99■□□□□ 0.31
PTPN13-204ENST00000436978 DCP1AQ9NPI6 582 aaPredicted RBP16.99■□□□□ 0.31
PTPN13-204ENST00000436978 RRAGDQ9NQL2 400 aaPredicted RBP16.99■□□□□ 0.31
PTPN13-204ENST00000436978 GTF3C2Q8WUA4 911 aaPredicted RBP16.99■□□□□ 0.31
PTPN13-204ENST00000436978 MAGEB5Q9BZ81 275 aa16.99■□□□□ 0.31
PTPN13-204ENST00000436978 SPATA33Q96N06 139 aa16.99■□□□□ 0.31
PTPN13-204ENST00000436978 KCNH4Q9UQ05 1017 aa16.99■□□□□ 0.31
PTPN13-204ENST00000436978 ASB14A6NK59 587 aa16.99■□□□□ 0.31
PTPN13-204ENST00000436978 SPOPLQ6IQ16 392 aa16.99■□□□□ 0.31
PTPN13-204ENST00000436978 PAPOLAP51003 745 aaKnown RBP16.98■□□□□ 0.31
PTPN13-204ENST00000436978 GPSM2P81274 684 aa16.98■□□□□ 0.31
PTPN13-204ENST00000436978 TAP1Q03518 808 aa16.98■□□□□ 0.31
PTPN13-204ENST00000436978 CYP4F22Q6NT55 531 aa16.98■□□□□ 0.31
PTPN13-204ENST00000436978 TBC1D10CQ8IV04 446 aa16.98■□□□□ 0.31
PTPN13-204ENST00000436978 MCUQ8NE86 351 aa16.98■□□□□ 0.31
PTPN13-204ENST00000436978 GJD4Q96KN9 370 aaPredicted RBP16.98■□□□□ 0.31
PTPN13-204ENST00000436978 ZWILCHQ9H900 591 aa16.98■□□□□ 0.31
PTPN13-204ENST00000436978 CCDC188H7C350 402 aa16.98■□□□□ 0.31
PTPN13-204ENST00000436978 MYLK4Q86YV6 388 aaPredicted RBP16.98■□□□□ 0.31
PTPN13-204ENST00000436978 VPS39Q96JC1 886 aa16.98■□□□□ 0.31
PTPN13-204ENST00000436978 SERPINI1Q99574 410 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms