RNA–Protein interactions for RNA: ENST00000436040.6

APTX-208, Transcript of aprataxin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene APTX, Length 2,168 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-208ENST00000436040 MARCH6O60337 910 aa12.93□□□□□ -0.34
APTX-208ENST00000436040 SMIM10L2AP0DMW4 78 aa12.93□□□□□ -0.34
APTX-208ENST00000436040 SMIM10L2BP0DMW5 78 aa12.93□□□□□ -0.34
APTX-208ENST00000436040 MARCKSP29966 332 aaPredicted RBP12.93□□□□□ -0.34
APTX-208ENST00000436040 ERCC6LQ2NKX8 1250 aa12.93□□□□□ -0.34
APTX-208ENST00000436040 GDF6Q6KF10 455 aaPredicted RBP12.93□□□□□ -0.34
APTX-208ENST00000436040 SH3RF1Q7Z6J0 888 aa12.93□□□□□ -0.34
APTX-208ENST00000436040 CCDC60Q8IWA6 550 aaPredicted RBP12.93□□□□□ -0.34
APTX-208ENST00000436040 MTMR9Q96QG7 549 aa12.93□□□□□ -0.34
APTX-208ENST00000436040 PRDM5Q9NQX1 630 aaPredicted RBP12.93□□□□□ -0.34
APTX-208ENST00000436040 ZNF302Q9NR11 478 aa12.93□□□□□ -0.34
APTX-208ENST00000436040 DISC1Q9NRI5 854 aa12.93□□□□□ -0.34
APTX-208ENST00000436040 TRMT13Q9NUP7 481 aaKnown RBP12.93□□□□□ -0.34
APTX-208ENST00000436040 ZMYND8Q9ULU4 1186 aaPredicted RBP12.93□□□□□ -0.34
APTX-208ENST00000436040 SAMM50Q9Y512 469 aa12.93□□□□□ -0.34
APTX-208ENST00000436040 TRIM43BA6NCK2 446 aa12.92□□□□□ -0.34
APTX-208ENST00000436040 PNMA6AP0CW24 399 aaPredicted RBP12.92□□□□□ -0.34
APTX-208ENST00000436040 CDC25AP30304 524 aa12.92□□□□□ -0.34
APTX-208ENST00000436040 CLCN6P51797 869 aa12.92□□□□□ -0.34
APTX-208ENST00000436040 E4F1Q66K89 784 aaPredicted RBP12.92□□□□□ -0.34
APTX-208ENST00000436040 TRMT1LQ7Z2T5 733 aaKnown RBP12.92□□□□□ -0.34
APTX-208ENST00000436040 MIER3Q7Z3K6 550 aa12.92□□□□□ -0.34
APTX-208ENST00000436040 ENGASEQ8NFI3 743 aa12.92□□□□□ -0.34
APTX-208ENST00000436040 TRIM43Q96BQ3 446 aaPredicted RBP12.92□□□□□ -0.34
APTX-208ENST00000436040 RNPEPQ9H4A4 650 aa12.92□□□□□ -0.34
APTX-208ENST00000436040 IGSF9BQ9UPX0 1349 aa12.92□□□□□ -0.34
APTX-208ENST00000436040 SYN1P17600 705 aa12.91□□□□□ -0.34
APTX-208ENST00000436040 MARK3P27448 753 aa12.91□□□□□ -0.34
APTX-208ENST00000436040 ETF1P62495 437 aaKnown RBP12.91□□□□□ -0.34
APTX-208ENST00000436040 PTPAQ15257 358 aa12.91□□□□□ -0.34
APTX-208ENST00000436040 PTGISQ16647 500 aa12.91□□□□□ -0.34
APTX-208ENST00000436040 ARHGAP29Q52LW3 1261 aa12.91□□□□□ -0.34
APTX-208ENST00000436040 PRPF38BQ5VTL8 546 aaKnown RBP12.91□□□□□ -0.34
APTX-208ENST00000436040 SWSAP1Q6NVH7 229 aa12.91□□□□□ -0.34
APTX-208ENST00000436040 AOPEPQ8N6M6 819 aa12.91□□□□□ -0.34
APTX-208ENST00000436040 IPO4Q8TEX9 1081 aaKnown RBP12.91□□□□□ -0.34
APTX-208ENST00000436040 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.91□□□□□ -0.34
APTX-208ENST00000436040 MAFBQ9Y5Q3 323 aaPredicted RBP12.91□□□□□ -0.34
APTX-208ENST00000436040 TANC1Q9C0D5 1861 aa12.91□□□□□ -0.34
APTX-208ENST00000436040 A0A087WWV3 80 aa12.91□□□□□ -0.34
APTX-208ENST00000436040 C17orf102A2RUQ5 167 aa12.91□□□□□ -0.34
APTX-208ENST00000436040 POTEMA6NI47 508 aa12.91□□□□□ -0.34
APTX-208ENST00000436040 PP2D1A8MPX8 630 aa12.91□□□□□ -0.34
APTX-208ENST00000436040 EFCAB8A8MWE9 144 aa12.91□□□□□ -0.34
APTX-208ENST00000436040 EML1O00423 815 aa12.91□□□□□ -0.34
APTX-208ENST00000436040 GNAT1P11488 350 aa12.91□□□□□ -0.34
APTX-208ENST00000436040 TECP42680 631 aa12.91□□□□□ -0.34
APTX-208ENST00000436040 SPIRE1Q08AE8 756 aa12.91□□□□□ -0.34
APTX-208ENST00000436040 PLCB4Q15147 1175 aa12.91□□□□□ -0.34
APTX-208ENST00000436040 SPECC1Q5M775 1068 aa12.91□□□□□ -0.34
APTX-208ENST00000436040 PDXDC2PQ6P474 469 aa12.91□□□□□ -0.34
APTX-208ENST00000436040 SYT10Q6XYQ8 523 aa12.91□□□□□ -0.34
APTX-208ENST00000436040 CTAGE1Q96RT6 745 aa12.91□□□□□ -0.34
APTX-208ENST00000436040 GABBR1Q9UBS5 961 aa12.91□□□□□ -0.34
APTX-208ENST00000436040 NRCAMQ92823 1304 aa12.91□□□□□ -0.34
APTX-208ENST00000436040 A0A1W2PQ27 194 aa12.9□□□□□ -0.34
APTX-208ENST00000436040 A0A1W2PQ64 194 aa12.9□□□□□ -0.34
APTX-208ENST00000436040 A0A1W2PQD8 194 aa12.9□□□□□ -0.34
APTX-208ENST00000436040 ZRANB2O95218 330 aaKnown RBP eCLIP12.9□□□□□ -0.34
APTX-208ENST00000436040 OR52Z1P0C646 297 aa12.9□□□□□ -0.34
APTX-208ENST00000436040 PPFIA1Q13136 1202 aa12.9□□□□□ -0.34
APTX-208ENST00000436040 HIC1Q14526 733 aa12.9□□□□□ -0.34
APTX-208ENST00000436040 MNS1Q8NEH6 495 aa12.9□□□□□ -0.34
APTX-208ENST00000436040 ATP8B4Q8TF62 1192 aa12.9□□□□□ -0.34
APTX-208ENST00000436040 MRPS27Q92552 414 aaKnown RBP12.9□□□□□ -0.34
APTX-208ENST00000436040 CLIC6Q96NY7 704 aa12.9□□□□□ -0.34
APTX-208ENST00000436040 PCDH10Q9P2E7 1040 aa12.9□□□□□ -0.34
APTX-208ENST00000436040 PCDHA12Q9UN75 941 aa12.9□□□□□ -0.34
APTX-208ENST00000436040 NOD1Q9Y239 953 aa12.9□□□□□ -0.34
APTX-208ENST00000436040 LAMA2P24043 3122 aaKnown RBP12.9□□□□□ -0.34
APTX-208ENST00000436040 CEP290O15078 2479 aa12.9□□□□□ -0.34
APTX-208ENST00000436040 POTEB3A0JP26 581 aa12.9□□□□□ -0.34
APTX-208ENST00000436040 TIMP1P01033 207 aa12.9□□□□□ -0.34
APTX-208ENST00000436040 RAG1P15918 1043 aa12.9□□□□□ -0.34
APTX-208ENST00000436040 ME1P48163 572 aa12.9□□□□□ -0.34
APTX-208ENST00000436040 ADAM17P78536 824 aa12.9□□□□□ -0.34
APTX-208ENST00000436040 PTK7Q13308 1070 aa12.9□□□□□ -0.34
APTX-208ENST00000436040 ADALQ6DHV7 355 aa12.9□□□□□ -0.34
APTX-208ENST00000436040 POTEBQ6S5H4 581 aa12.9□□□□□ -0.34
APTX-208ENST00000436040 FSIP1Q8NA03 581 aa12.9□□□□□ -0.34
APTX-208ENST00000436040 LMBR1Q8WVP7 490 aa12.9□□□□□ -0.34
APTX-208ENST00000436040 ATP6V0A1Q93050 837 aa12.9□□□□□ -0.34
APTX-208ENST00000436040 NOC4LQ9BVI4 516 aaKnown RBP12.9□□□□□ -0.34
APTX-208ENST00000436040 HIPK3Q9H422 1215 aa12.9□□□□□ -0.34
APTX-208ENST00000436040 CWC15Q9P013 229 aaKnown RBP12.9□□□□□ -0.34
APTX-208ENST00000436040 TRPC6Q9Y210 931 aa12.9□□□□□ -0.34
APTX-208ENST00000436040 VWA3AA6NCI4 1184 aa12.89□□□□□ -0.35
APTX-208ENST00000436040 RRN3P2A6NIE6 340 aa12.89□□□□□ -0.35
APTX-208ENST00000436040 LAD1O00515 517 aa12.89□□□□□ -0.35
APTX-208ENST00000436040 HBP1O60381 514 aa12.89□□□□□ -0.35
APTX-208ENST00000436040 SMC2O95347 1197 aa12.89□□□□□ -0.35
APTX-208ENST00000436040 CYP2C9P11712 490 aa12.89□□□□□ -0.35
APTX-208ENST00000436040 ATP4AP20648 1035 aa12.89□□□□□ -0.35
APTX-208ENST00000436040 ITGB8P26012 769 aa12.89□□□□□ -0.35
APTX-208ENST00000436040 HNRNPH2P55795 449 aaKnown RBP12.89□□□□□ -0.35
APTX-208ENST00000436040 ZNF200P98182 395 aaPredicted RBP12.89□□□□□ -0.35
APTX-208ENST00000436040 ATP2C1P98194 919 aaPredicted RBP12.89□□□□□ -0.35
APTX-208ENST00000436040 RBL2Q08999 1139 aa12.89□□□□□ -0.35
APTX-208ENST00000436040 EPHA7Q15375 998 aa12.89□□□□□ -0.35
APTX-208ENST00000436040 GRIK4Q16099 956 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms