RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 AGO3Q9H9G7 860 aaKnown RBP18.21■□□□□ 0.51
SMPD4-207ENST00000435455 SUGCTQ9HAC7 445 aa18.21■□□□□ 0.51
SMPD4-207ENST00000435455 RGL1Q9NZL6 768 aa18.21■□□□□ 0.51
SMPD4-207ENST00000435455 PADI3Q9ULW8 664 aa18.21■□□□□ 0.51
SMPD4-207ENST00000435455 GINS2Q9Y248 185 aa18.21■□□□□ 0.51
SMPD4-207ENST00000435455 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.2■□□□□ 0.5
SMPD4-207ENST00000435455 TMEM150BA6NC51 233 aa18.2■□□□□ 0.5
SMPD4-207ENST00000435455 CDC42EP1Q00587 391 aa18.2■□□□□ 0.5
SMPD4-207ENST00000435455 CYP4A11Q02928 519 aa18.2■□□□□ 0.5
SMPD4-207ENST00000435455 GRIN2CQ14957 1233 aa18.2■□□□□ 0.5
SMPD4-207ENST00000435455 KIZQ2M2Z5 673 aa18.2■□□□□ 0.5
SMPD4-207ENST00000435455 LARP1BQ659C4 914 aaKnown RBP18.2■□□□□ 0.5
SMPD4-207ENST00000435455 CYP26B1Q9NR63 512 aa18.2■□□□□ 0.5
SMPD4-207ENST00000435455 WRAP73Q9P2S5 460 aaPredicted RBP18.2■□□□□ 0.5
SMPD4-207ENST00000435455 INSL6Q9Y581 213 aa18.2■□□□□ 0.5
SMPD4-207ENST00000435455 ARID2Q68CP9 1835 aa18.2■□□□□ 0.5
SMPD4-207ENST00000435455 TRANK1O15050 2925 aa18.2■□□□□ 0.5
SMPD4-207ENST00000435455 TTC3P53804 2025 aa18.2■□□□□ 0.5
SMPD4-207ENST00000435455 IGKV6-21A0A0C4DH24 114 aa18.19■□□□□ 0.5
SMPD4-207ENST00000435455 GPR32O75388 356 aa18.19■□□□□ 0.5
SMPD4-207ENST00000435455 MAFO75444 373 aaPredicted RBP18.19■□□□□ 0.5
SMPD4-207ENST00000435455 RPS6KA5O75582 802 aa18.19■□□□□ 0.5
SMPD4-207ENST00000435455 SLITRK3O94933 977 aa18.19■□□□□ 0.5
SMPD4-207ENST00000435455 LYPLA2O95372 231 aa18.19■□□□□ 0.5
SMPD4-207ENST00000435455 PDCP20941 246 aa18.19■□□□□ 0.5
SMPD4-207ENST00000435455 NLRP11P59045 1033 aaKnown RBP18.19■□□□□ 0.5
SMPD4-207ENST00000435455 CTTNQ14247 550 aaKnown RBP18.19■□□□□ 0.5
SMPD4-207ENST00000435455 TMEM266Q2M3C6 531 aa18.19■□□□□ 0.5
SMPD4-207ENST00000435455 PLA2G4FQ68DD2 849 aa18.19■□□□□ 0.5
SMPD4-207ENST00000435455 FAM117BQ6P1L5 589 aa18.19■□□□□ 0.5
SMPD4-207ENST00000435455 TMCO2Q7Z6W1 182 aaPredicted RBP18.19■□□□□ 0.5
SMPD4-207ENST00000435455 TPH2Q8IWU9 490 aa18.19■□□□□ 0.5
SMPD4-207ENST00000435455 SLC7A3Q8WY07 619 aa18.19■□□□□ 0.5
SMPD4-207ENST00000435455 MYLIPQ8WY64 445 aa18.19■□□□□ 0.5
SMPD4-207ENST00000435455 TOP1MTQ969P6 601 aa18.19■□□□□ 0.5
SMPD4-207ENST00000435455 CEP170P1Q96L14 293 aa18.19■□□□□ 0.5
SMPD4-207ENST00000435455 HSD17B14Q9BPX1 270 aa18.19■□□□□ 0.5
SMPD4-207ENST00000435455 CDHR5Q9HBB8 845 aa18.19■□□□□ 0.5
SMPD4-207ENST00000435455 NOC2LQ9Y3T9 749 aaKnown RBP18.19■□□□□ 0.5
SMPD4-207ENST00000435455 CDH23Q9H251 3354 aa18.18■□□□□ 0.5
SMPD4-207ENST00000435455 ENPP3O14638 875 aa18.18■□□□□ 0.5
SMPD4-207ENST00000435455 GPR182O15218 404 aa18.18■□□□□ 0.5
SMPD4-207ENST00000435455 YWHABP31946 246 aaKnown RBP18.18■□□□□ 0.5
SMPD4-207ENST00000435455 RFC5P40937 340 aa18.18■□□□□ 0.5
SMPD4-207ENST00000435455 TOB1P50616 345 aaPredicted RBP18.18■□□□□ 0.5
SMPD4-207ENST00000435455 NPEPPSP55786 919 aa18.18■□□□□ 0.5
SMPD4-207ENST00000435455 RILPL1Q5EBL4 403 aa18.18■□□□□ 0.5
SMPD4-207ENST00000435455 ERMNQ8TAM6 284 aa18.18■□□□□ 0.5
SMPD4-207ENST00000435455 SCLT1Q96NL6 688 aa18.18■□□□□ 0.5
SMPD4-207ENST00000435455 PPP1R16BQ96T49 567 aa18.18■□□□□ 0.5
SMPD4-207ENST00000435455 GAS2L1Q99501 681 aaPredicted RBP18.18■□□□□ 0.5
SMPD4-207ENST00000435455 OSMRQ99650 979 aa18.18■□□□□ 0.5
SMPD4-207ENST00000435455 SH2D3AQ9BRG2 576 aa18.18■□□□□ 0.5
SMPD4-207ENST00000435455 ADAMTS10Q9H324 1103 aa18.18■□□□□ 0.5
SMPD4-207ENST00000435455 ERVK-5Q9HDB9 667 aa18.18■□□□□ 0.5
SMPD4-207ENST00000435455 COL6A3P12111 3177 aa18.18■□□□□ 0.5
SMPD4-207ENST00000435455 POTEMA6NI47 508 aa18.17■□□□□ 0.5
SMPD4-207ENST00000435455 RBAK-RBAKDNI3L0D1 243 aa18.17■□□□□ 0.5
SMPD4-207ENST00000435455 LAD1O00515 517 aa18.17■□□□□ 0.5
SMPD4-207ENST00000435455 GAS2O43903 313 aaKnown RBP18.17■□□□□ 0.5
SMPD4-207ENST00000435455 TECP42680 631 aa18.17■□□□□ 0.5
SMPD4-207ENST00000435455 GPC3P51654 580 aa18.17■□□□□ 0.5
SMPD4-207ENST00000435455 POLGP54098 1239 aaPredicted RBP18.17■□□□□ 0.5
SMPD4-207ENST00000435455 HTRA4P83105 476 aaPredicted RBP18.17■□□□□ 0.5
SMPD4-207ENST00000435455 TAP1Q03518 808 aa18.17■□□□□ 0.5
SMPD4-207ENST00000435455 NFX1Q12986 1120 aaKnown RBP18.17■□□□□ 0.5
SMPD4-207ENST00000435455 NBR1Q14596 966 aa18.17■□□□□ 0.5
SMPD4-207ENST00000435455 XKR9Q5GH70 373 aa18.17■□□□□ 0.5
SMPD4-207ENST00000435455 C4orf32Q8N8J7 132 aa18.17■□□□□ 0.5
SMPD4-207ENST00000435455 TMEM40Q8WWA1 233 aa18.17■□□□□ 0.5
SMPD4-207ENST00000435455 INTS4Q96HW7 963 aaKnown RBP18.17■□□□□ 0.5
SMPD4-207ENST00000435455 TSPYL2Q9H2G4 693 aaPredicted RBP18.17■□□□□ 0.5
SMPD4-207ENST00000435455 PRDM12Q9H4Q4 367 aa18.17■□□□□ 0.5
SMPD4-207ENST00000435455 DHX33Q9H6R0 707 aaKnown RBP18.17■□□□□ 0.5
SMPD4-207ENST00000435455 TUFT1Q9NNX1 390 aa18.17■□□□□ 0.5
SMPD4-207ENST00000435455 ANKEF1Q9NU02 776 aa18.17■□□□□ 0.5
SMPD4-207ENST00000435455 PCDHB6Q9Y5E3 794 aa18.17■□□□□ 0.5
SMPD4-207ENST00000435455 K7ELQ4 463 aaPredicted RBP18.16■□□□□ 0.5
SMPD4-207ENST00000435455 UPP2O95045 317 aa18.16■□□□□ 0.5
SMPD4-207ENST00000435455 FOSL2P15408 326 aa18.16■□□□□ 0.5
SMPD4-207ENST00000435455 EIF4BP23588 611 aaKnown RBP18.16■□□□□ 0.5
SMPD4-207ENST00000435455 PTGDRQ13258 359 aa18.16■□□□□ 0.5
SMPD4-207ENST00000435455 NLRP7Q8WX94 980 aa18.16■□□□□ 0.5
SMPD4-207ENST00000435455 LINC01599Q8WXQ3 324 aa18.16■□□□□ 0.5
SMPD4-207ENST00000435455 CCDC43Q96MW1 224 aaKnown RBP18.16■□□□□ 0.5
SMPD4-207ENST00000435455 YME1L1Q96TA2 773 aa18.16■□□□□ 0.5
SMPD4-207ENST00000435455 POLR3CQ9BUI4 534 aaPredicted RBP18.16■□□□□ 0.5
SMPD4-207ENST00000435455 RAB34Q9BZG1 259 aa18.16■□□□□ 0.5
SMPD4-207ENST00000435455 RNF216Q9NWF9 866 aaPredicted RBP18.16■□□□□ 0.5
SMPD4-207ENST00000435455 SUCLA2Q9P2R7 463 aaPredicted RBP18.16■□□□□ 0.5
SMPD4-207ENST00000435455 ST3GAL5Q9UNP4 418 aa18.16■□□□□ 0.5
SMPD4-207ENST00000435455 LCHNA4D1U4 455 aa18.15■□□□□ 0.5
SMPD4-207ENST00000435455 XRCC6P12956 609 aaKnown RBP eCLIP18.15■□□□□ 0.5
SMPD4-207ENST00000435455 DARSP14868 501 aaKnown RBP18.15■□□□□ 0.5
SMPD4-207ENST00000435455 PRPHP41219 470 aa18.15■□□□□ 0.5
SMPD4-207ENST00000435455 FXR2P51116 673 aaKnown RBP eCLIP18.15■□□□□ 0.5
SMPD4-207ENST00000435455 DRP2Q13474 957 aa18.15■□□□□ 0.5
SMPD4-207ENST00000435455 PDIA5Q14554 519 aa18.15■□□□□ 0.5
SMPD4-207ENST00000435455 BRAPQ7Z569 592 aa18.15■□□□□ 0.5
SMPD4-207ENST00000435455 ZNF410Q86VK4 478 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms