RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 ANKEF1Q9NU02 776 aa20.55■□□□□ 0.88
HLA-F-220ENST00000434407 TTC3P53804 2025 aa20.54■□□□□ 0.88
HLA-F-220ENST00000434407 CHD9Q3L8U1 2897 aa20.54■□□□□ 0.88
HLA-F-220ENST00000434407 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.54■□□□□ 0.88
HLA-F-220ENST00000434407 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.54■□□□□ 0.88
HLA-F-220ENST00000434407 RBAK-RBAKDNI3L0D1 243 aa20.54■□□□□ 0.88
HLA-F-220ENST00000434407 M0QZ92 97 aa20.54■□□□□ 0.88
HLA-F-220ENST00000434407 EFCAB14O75071 495 aa20.54■□□□□ 0.88
HLA-F-220ENST00000434407 GPR32O75388 356 aa20.54■□□□□ 0.88
HLA-F-220ENST00000434407 BMP15O95972 392 aa20.54■□□□□ 0.88
HLA-F-220ENST00000434407 HSP90AA1P07900 732 aaKnown RBP20.54■□□□□ 0.88
HLA-F-220ENST00000434407 TMEM62Q0P6H9 643 aa20.54■□□□□ 0.88
HLA-F-220ENST00000434407 FAM109BQ6ICB4 259 aaPredicted RBP20.54■□□□□ 0.88
HLA-F-220ENST00000434407 DTHD1Q6ZMT9 781 aa20.54■□□□□ 0.88
HLA-F-220ENST00000434407 TSHZ1Q6ZSZ6 1077 aa20.54■□□□□ 0.88
HLA-F-220ENST00000434407 EXOC8Q8IYI6 725 aa20.54■□□□□ 0.88
HLA-F-220ENST00000434407 LRRC71Q8N4P6 559 aa20.54■□□□□ 0.88
HLA-F-220ENST00000434407 USP38Q8NB14 1042 aa20.54■□□□□ 0.88
HLA-F-220ENST00000434407 ERMNQ8TAM6 284 aa20.54■□□□□ 0.88
HLA-F-220ENST00000434407 APBB2Q92870 758 aa20.54■□□□□ 0.88
HLA-F-220ENST00000434407 LRCH3Q96II8 777 aa20.54■□□□□ 0.88
HLA-F-220ENST00000434407 CEP170P1Q96L14 293 aa20.54■□□□□ 0.88
HLA-F-220ENST00000434407 RAB34Q9BZG1 259 aa20.54■□□□□ 0.88
HLA-F-220ENST00000434407 ZSCAN16Q9H4T2 348 aaPredicted RBP20.54■□□□□ 0.88
HLA-F-220ENST00000434407 SLC4A7Q9Y6M7 1214 aa20.54■□□□□ 0.88
HLA-F-220ENST00000434407 GHRP10912 638 aa20.53■□□□□ 0.88
HLA-F-220ENST00000434407 IKBKEQ14164 716 aa20.53■□□□□ 0.88
HLA-F-220ENST00000434407 PHOSPHO2Q8TCD6 241 aa20.53■□□□□ 0.88
HLA-F-220ENST00000434407 SEPT8Q92599 483 aa20.53■□□□□ 0.88
HLA-F-220ENST00000434407 JPH2Q9BR39 696 aaPredicted RBP20.53■□□□□ 0.88
HLA-F-220ENST00000434407 IFIH1Q9BYX4 1025 aaKnown RBP20.53■□□□□ 0.88
HLA-F-220ENST00000434407 ADAMTS10Q9H324 1103 aa20.53■□□□□ 0.88
HLA-F-220ENST00000434407 AGO3Q9H9G7 860 aaKnown RBP20.53■□□□□ 0.88
HLA-F-220ENST00000434407 CDHR5Q9HBB8 845 aa20.53■□□□□ 0.88
HLA-F-220ENST00000434407 LRWD1Q9UFC0 647 aa20.53■□□□□ 0.88
HLA-F-220ENST00000434407 STK24Q9Y6E0 443 aa20.53■□□□□ 0.88
HLA-F-220ENST00000434407 ZBBXA8MT70 800 aa20.52■□□□□ 0.88
HLA-F-220ENST00000434407 VTNP04004 478 aa20.52■□□□□ 0.88
HLA-F-220ENST00000434407 RFC5P40937 340 aa20.52■□□□□ 0.88
HLA-F-220ENST00000434407 RARRES1P49788 294 aa20.52■□□□□ 0.88
HLA-F-220ENST00000434407 WDR5P61964 334 aaKnown RBP20.52■□□□□ 0.88
HLA-F-220ENST00000434407 DRP2Q13474 957 aa20.52■□□□□ 0.88
HLA-F-220ENST00000434407 HAUS3Q68CZ6 603 aa20.52■□□□□ 0.88
HLA-F-220ENST00000434407 FAM43BQ6ZT52 329 aaPredicted RBP20.52■□□□□ 0.88
HLA-F-220ENST00000434407 MAP7D2Q96T17 732 aa20.52■□□□□ 0.88
HLA-F-220ENST00000434407 SLC9A7Q96T83 725 aa20.52■□□□□ 0.88
HLA-F-220ENST00000434407 SUGCTQ9HAC7 445 aa20.52■□□□□ 0.88
HLA-F-220ENST00000434407 CHD7Q9P2D1 2997 aa20.51■□□□□ 0.87
HLA-F-220ENST00000434407 GAS2O43903 313 aaKnown RBP20.51■□□□□ 0.87
HLA-F-220ENST00000434407 CRYBB1P53674 252 aaPredicted RBP20.51■□□□□ 0.87
HLA-F-220ENST00000434407 PTPAQ15257 358 aa20.51■□□□□ 0.87
HLA-F-220ENST00000434407 SF3A1Q15459 793 aaKnown RBP20.51■□□□□ 0.87
HLA-F-220ENST00000434407 ECM1Q16610 540 aa20.51■□□□□ 0.87
HLA-F-220ENST00000434407 KIZQ2M2Z5 673 aa20.51■□□□□ 0.87
HLA-F-220ENST00000434407 XKR9Q5GH70 373 aa20.51■□□□□ 0.87
HLA-F-220ENST00000434407 NACC1Q96RE7 527 aa20.51■□□□□ 0.87
HLA-F-220ENST00000434407 MMTAG2Q9BU76 263 aaKnown RBP20.51■□□□□ 0.87
HLA-F-220ENST00000434407 DBR1Q9UK59 544 aaKnown RBP20.51■□□□□ 0.87
HLA-F-220ENST00000434407 AKT3Q9Y243 479 aa20.51■□□□□ 0.87
HLA-F-220ENST00000434407 MORC2Q9Y6X9 1032 aaPredicted RBP20.51■□□□□ 0.87
HLA-F-220ENST00000434407 GRXCR1A8MXD5 290 aa20.5■□□□□ 0.87
HLA-F-220ENST00000434407 ATP2A2P16615 1042 aaKnown RBP20.5■□□□□ 0.87
HLA-F-220ENST00000434407 DNM2P50570 870 aa20.5■□□□□ 0.87
HLA-F-220ENST00000434407 GPC3P51654 580 aa20.5■□□□□ 0.87
HLA-F-220ENST00000434407 NLRP11P59045 1033 aaKnown RBP20.5■□□□□ 0.87
HLA-F-220ENST00000434407 CDC42EP1Q00587 391 aa20.5■□□□□ 0.87
HLA-F-220ENST00000434407 FAM173BQ6P4H8 233 aa20.5■□□□□ 0.87
HLA-F-220ENST00000434407 POTEGQ6S5H5 508 aa20.5■□□□□ 0.87
HLA-F-220ENST00000434407 PIGOQ8TEQ8 1089 aa20.5■□□□□ 0.87
HLA-F-220ENST00000434407 TMEM40Q8WWA1 233 aa20.5■□□□□ 0.87
HLA-F-220ENST00000434407 SLC7A3Q8WY07 619 aa20.5■□□□□ 0.87
HLA-F-220ENST00000434407 CLIC4Q9Y696 253 aa20.5■□□□□ 0.87
HLA-F-220ENST00000434407 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.49■□□□□ 0.87
HLA-F-220ENST00000434407 CD52P31358 61 aa20.49■□□□□ 0.87
HLA-F-220ENST00000434407 CCT6AP40227 531 aaKnown RBP20.49■□□□□ 0.87
HLA-F-220ENST00000434407 POLGP54098 1239 aaPredicted RBP20.49■□□□□ 0.87
HLA-F-220ENST00000434407 EMC2Q15006 297 aa20.49■□□□□ 0.87
HLA-F-220ENST00000434407 OSMRQ99650 979 aa20.49■□□□□ 0.87
HLA-F-220ENST00000434407 XPNPEP1Q9NQW7 623 aa20.49■□□□□ 0.87
HLA-F-220ENST00000434407 SUCLA2Q9P2R7 463 aaPredicted RBP20.49■□□□□ 0.87
HLA-F-220ENST00000434407 PADI3Q9ULW8 664 aa20.49■□□□□ 0.87
HLA-F-220ENST00000434407 CDH23Q9H251 3354 aa20.48■□□□□ 0.87
HLA-F-220ENST00000434407 A0A087WWV3 80 aa20.48■□□□□ 0.87
HLA-F-220ENST00000434407 VWA3AA6NCI4 1184 aa20.48■□□□□ 0.87
HLA-F-220ENST00000434407 PP2D1A8MPX8 630 aa20.48■□□□□ 0.87
HLA-F-220ENST00000434407 DGAT1O75907 488 aa20.48■□□□□ 0.87
HLA-F-220ENST00000434407 ZSCAN22P10073 491 aaPredicted RBP20.48■□□□□ 0.87
HLA-F-220ENST00000434407 KCNJ6P48051 423 aa20.48■□□□□ 0.87
HLA-F-220ENST00000434407 DEFB103AP81534 67 aa20.48■□□□□ 0.87
HLA-F-220ENST00000434407 HYIQ5T013 277 aa20.48■□□□□ 0.87
HLA-F-220ENST00000434407 KRT79Q5XKE5 535 aa20.48■□□□□ 0.87
HLA-F-220ENST00000434407 SPRYD3Q8NCJ5 442 aa20.48■□□□□ 0.87
HLA-F-220ENST00000434407 SNX29Q8TEQ0 813 aa20.48■□□□□ 0.87
HLA-F-220ENST00000434407 AK8Q96MA6 479 aa20.48■□□□□ 0.87
HLA-F-220ENST00000434407 PBX4Q9BYU1 374 aa20.48■□□□□ 0.87
HLA-F-220ENST00000434407 ERVK-5Q9HDB9 667 aa20.48■□□□□ 0.87
HLA-F-220ENST00000434407 NOC2LQ9Y3T9 749 aaKnown RBP20.48■□□□□ 0.87
HLA-F-220ENST00000434407 EIF4BP23588 611 aaKnown RBP20.47■□□□□ 0.87
HLA-F-220ENST00000434407 CDC25AP30304 524 aa20.47■□□□□ 0.87
HLA-F-220ENST00000434407 PAK2Q13177 524 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms