RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 SLC7A3Q8WY07 619 aa29.34■■■□□ 2.29
TMEM248-205ENST00000433271 ATP6V0A4Q9HBG4 840 aa29.34■■■□□ 2.29
TMEM248-205ENST00000433271 ARID2Q68CP9 1835 aa29.34■■■□□ 2.29
TMEM248-205ENST00000433271 RSPH10B2B2RC85 870 aa29.34■■■□□ 2.29
TMEM248-205ENST00000433271 HIP1RO75146 1068 aa29.34■■■□□ 2.29
TMEM248-205ENST00000433271 FAM13AO94988 1023 aa29.34■■■□□ 2.29
TMEM248-205ENST00000433271 RSPH10BP0C881 870 aa29.34■■■□□ 2.29
TMEM248-205ENST00000433271 INSRRP14616 1297 aa29.34■■■□□ 2.29
TMEM248-205ENST00000433271 ZNF131P52739 623 aa29.34■■■□□ 2.29
TMEM248-205ENST00000433271 PKN2Q16513 984 aaKnown RBP29.34■■■□□ 2.29
TMEM248-205ENST00000433271 DPCR1Q3MIW9 517 aa29.34■■■□□ 2.29
TMEM248-205ENST00000433271 HERC4Q5GLZ8 1057 aaPredicted RBP29.34■■■□□ 2.29
TMEM248-205ENST00000433271 KATNAL1Q9BW62 490 aa29.34■■■□□ 2.29
TMEM248-205ENST00000433271 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.34■■■□□ 2.29
TMEM248-205ENST00000433271 ZHX3Q9H4I2 956 aa29.34■■■□□ 2.29
TMEM248-205ENST00000433271 HAS3O00219 553 aa29.33■■■□□ 2.29
TMEM248-205ENST00000433271 GAP43P17677 238 aa29.33■■■□□ 2.29
TMEM248-205ENST00000433271 TBC1D8BQ0IIM8 1120 aa29.33■■■□□ 2.29
TMEM248-205ENST00000433271 MAPK7Q13164 816 aa29.33■■■□□ 2.29
TMEM248-205ENST00000433271 FBXO46Q6PJ61 603 aaPredicted RBP29.33■■■□□ 2.29
TMEM248-205ENST00000433271 MAEAQ7L5Y9 396 aa29.33■■■□□ 2.29
TMEM248-205ENST00000433271 RNF180Q86T96 592 aa29.33■■■□□ 2.29
TMEM248-205ENST00000433271 DAW1Q8N136 415 aa29.33■■■□□ 2.29
TMEM248-205ENST00000433271 MLKLQ8NB16 471 aa29.33■■■□□ 2.29
TMEM248-205ENST00000433271 DRC1Q96MC2 740 aa29.33■■■□□ 2.29
TMEM248-205ENST00000433271 PARVGQ9HBI0 331 aa29.33■■■□□ 2.29
TMEM248-205ENST00000433271 POLD4Q9HCU8 107 aa29.33■■■□□ 2.29
TMEM248-205ENST00000433271 COL1A2P08123 1366 aa29.33■■■□□ 2.29
TMEM248-205ENST00000433271 MAFO75444 373 aaPredicted RBP29.32■■■□□ 2.28
TMEM248-205ENST00000433271 MFSD10Q14728 455 aa29.32■■■□□ 2.28
TMEM248-205ENST00000433271 EMC2Q15006 297 aa29.32■■■□□ 2.28
TMEM248-205ENST00000433271 KIAA0753Q2KHM9 967 aa29.32■■■□□ 2.28
TMEM248-205ENST00000433271 CCSAPQ6IQ19 270 aaPredicted RBP29.32■■■□□ 2.28
TMEM248-205ENST00000433271 PCSK9Q8NBP7 692 aaKnown RBP29.32■■■□□ 2.28
TMEM248-205ENST00000433271 MTG1Q9BT17 334 aaPredicted RBP29.32■■■□□ 2.28
TMEM248-205ENST00000433271 XPNPEP1Q9NQW7 623 aa29.32■■■□□ 2.28
TMEM248-205ENST00000433271 PSEN2P49810 448 aa29.31■■■□□ 2.28
TMEM248-205ENST00000433271 ANO6Q4KMQ2 910 aa29.31■■■□□ 2.28
TMEM248-205ENST00000433271 FAM102BQ5T8I3 360 aa29.31■■■□□ 2.28
TMEM248-205ENST00000433271 KIFAP3Q92845 792 aa29.31■■■□□ 2.28
TMEM248-205ENST00000433271 UNC93B1Q9H1C4 597 aa29.31■■■□□ 2.28
TMEM248-205ENST00000433271 SFI1A8K8P3 1242 aa29.31■■■□□ 2.28
TMEM248-205ENST00000433271 CAVIN2O95810 425 aa29.31■■■□□ 2.28
TMEM248-205ENST00000433271 STK4Q13043 487 aa29.31■■■□□ 2.28
TMEM248-205ENST00000433271 KCNA10Q16322 511 aa29.31■■■□□ 2.28
TMEM248-205ENST00000433271 HPS3Q969F9 1004 aa29.31■■■□□ 2.28
TMEM248-205ENST00000433271 JPH2Q9BR39 696 aaPredicted RBP29.31■■■□□ 2.28
TMEM248-205ENST00000433271 DNAJC25Q9H1X3 360 aa29.31■■■□□ 2.28
TMEM248-205ENST00000433271 SEL1LQ9UBV2 794 aa29.31■■■□□ 2.28
TMEM248-205ENST00000433271 PPFIA1Q13136 1202 aa29.3■■■□□ 2.28
TMEM248-205ENST00000433271 FAM26FQ5R3K3 315 aa29.3■■■□□ 2.28
TMEM248-205ENST00000433271 SFR1Q86XK3 245 aa29.3■■■□□ 2.28
TMEM248-205ENST00000433271 MYCT1Q8N699 235 aa29.3■■■□□ 2.28
TMEM248-205ENST00000433271 GPRC5CQ9NQ84 441 aa29.3■■■□□ 2.28
TMEM248-205ENST00000433271 PAK6Q9NQU5 681 aaPredicted RBP29.3■■■□□ 2.28
TMEM248-205ENST00000433271 OLFML3Q9NRN5 406 aa29.3■■■□□ 2.28
TMEM248-205ENST00000433271 GDAQ9Y2T3 454 aa29.3■■■□□ 2.28
TMEM248-205ENST00000433271 PCDHA2Q9Y5H9 948 aa29.3■■■□□ 2.28
TMEM248-205ENST00000433271 IGKV6-21A0A0C4DH24 114 aa29.29■■■□□ 2.28
TMEM248-205ENST00000433271 GAS2O43903 313 aaKnown RBP29.29■■■□□ 2.28
TMEM248-205ENST00000433271 LRRC41Q15345 812 aa29.29■■■□□ 2.28
TMEM248-205ENST00000433271 CXCL17Q6UXB2 119 aa29.29■■■□□ 2.28
TMEM248-205ENST00000433271 GAS2L3Q86XJ1 694 aa29.29■■■□□ 2.28
TMEM248-205ENST00000433271 TRAPPC12Q8WVT3 735 aa29.29■■■□□ 2.28
TMEM248-205ENST00000433271 C17orf75Q9HAS0 396 aa29.29■■■□□ 2.28
TMEM248-205ENST00000433271 SLC39A2Q9NP94 309 aa29.29■■■□□ 2.28
TMEM248-205ENST00000433271 LARSQ9P2J5 1176 aaKnown RBP29.29■■■□□ 2.28
TMEM248-205ENST00000433271 DACH1Q9UI36 760 aa29.29■■■□□ 2.28
TMEM248-205ENST00000433271 RRN3P2A6NIE6 340 aa29.28■■■□□ 2.28
TMEM248-205ENST00000433271 MAGEB2O15479 319 aa29.28■■■□□ 2.28
TMEM248-205ENST00000433271 MYCNP04198 464 aaPredicted RBP29.28■■■□□ 2.28
TMEM248-205ENST00000433271 ASGR1P07306 291 aa29.28■■■□□ 2.28
TMEM248-205ENST00000433271 SMIM10L2AP0DMW4 78 aa29.28■■■□□ 2.28
TMEM248-205ENST00000433271 SMIM10L2BP0DMW5 78 aa29.28■■■□□ 2.28
TMEM248-205ENST00000433271 RTP1P59025 263 aa29.28■■■□□ 2.28
TMEM248-205ENST00000433271 GRIK4Q16099 956 aa29.28■■■□□ 2.28
TMEM248-205ENST00000433271 ODR4Q5SWX8 454 aa29.28■■■□□ 2.28
TMEM248-205ENST00000433271 C11orf57Q6ZUT1 292 aaPredicted RBP29.28■■■□□ 2.28
TMEM248-205ENST00000433271 SMYD4Q8IYR2 804 aaPredicted RBP29.28■■■□□ 2.28
TMEM248-205ENST00000433271 KIAA0895Q8NCT3 520 aa29.28■■■□□ 2.28
TMEM248-205ENST00000433271 NAT10Q9H0A0 1025 aaKnown RBP29.28■■■□□ 2.28
TMEM248-205ENST00000433271 NRCAMQ92823 1304 aa29.28■■■□□ 2.28
TMEM248-205ENST00000433271 CCL5P13501 91 aa29.27■■■□□ 2.28
TMEM248-205ENST00000433271 PLS3P13797 630 aa29.27■■■□□ 2.28
TMEM248-205ENST00000433271 CHMP4BP1P59074 171 aa29.27■■■□□ 2.28
TMEM248-205ENST00000433271 IGBP1P78318 339 aa29.27■■■□□ 2.28
TMEM248-205ENST00000433271 MTFR1Q15390 333 aa29.27■■■□□ 2.28
TMEM248-205ENST00000433271 CT47A1Q5JQC4 288 aaPredicted RBP29.27■■■□□ 2.28
TMEM248-205ENST00000433271 C22orf31O95567 290 aa29.27■■■□□ 2.28
TMEM248-205ENST00000433271 KLRC1P26715 233 aa29.27■■■□□ 2.28
TMEM248-205ENST00000433271 SOX10P56693 466 aa29.27■■■□□ 2.28
TMEM248-205ENST00000433271 COBLL1Q53SF7 1204 aa29.27■■■□□ 2.28
TMEM248-205ENST00000433271 ARRDC4Q8NCT1 418 aa29.27■■■□□ 2.28
TMEM248-205ENST00000433271 TSEN34Q9BSV6 310 aaKnown RBP29.27■■■□□ 2.28
TMEM248-205ENST00000433271 TBC1D7Q9P0N9 293 aa29.27■■■□□ 2.28
TMEM248-205ENST00000433271 PPP1R3GB7ZBB8 358 aa29.26■■■□□ 2.27
TMEM248-205ENST00000433271 ARL2P36404 184 aa29.26■■■□□ 2.27
TMEM248-205ENST00000433271 RETREG2Q8NC44 543 aa29.26■■■□□ 2.27
TMEM248-205ENST00000433271 TMEM143Q96AN5 459 aa29.26■■■□□ 2.27
TMEM248-205ENST00000433271 RNF208Q9H0X6 261 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms