RNA–Protein interactions for RNA: ENST00000432645.6

HDAC9-212, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-212ENST00000432645 PADI6Q6TGC4 694 aa9.13□□□□□ -0.95
HDAC9-212ENST00000432645 DEF6Q9H4E7 631 aa9.13□□□□□ -0.95
HDAC9-212ENST00000432645 OLFML3Q9NRN5 406 aa9.13□□□□□ -0.95
HDAC9-212ENST00000432645 ARMCX3Q9UH62 379 aaPredicted RBP9.13□□□□□ -0.95
HDAC9-212ENST00000432645 TCEAL9Q9UHQ7 104 aa9.13□□□□□ -0.95
HDAC9-212ENST00000432645 PUF60Q9UHX1 559 aaKnown RBP9.13□□□□□ -0.95
HDAC9-212ENST00000432645 MRFAP1Q9Y605 127 aa9.13□□□□□ -0.95
HDAC9-212ENST00000432645 MACROD2A1Z1Q3 448 aa9.13□□□□□ -0.95
HDAC9-212ENST00000432645 ADM5C9JUS6 153 aa9.13□□□□□ -0.95
HDAC9-212ENST00000432645 PDXKO00764 312 aa9.13□□□□□ -0.95
HDAC9-212ENST00000432645 ZNF263O14978 683 aa9.13□□□□□ -0.95
HDAC9-212ENST00000432645 CALUO43852 315 aaPredicted RBP9.13□□□□□ -0.95
HDAC9-212ENST00000432645 USO1O60763 962 aaKnown RBP9.13□□□□□ -0.95
HDAC9-212ENST00000432645 NOL4O94818 638 aa9.13□□□□□ -0.95
HDAC9-212ENST00000432645 P4HBP07237 508 aaKnown RBP9.13□□□□□ -0.95
HDAC9-212ENST00000432645 HOXA7P31268 230 aaPredicted RBP9.13□□□□□ -0.95
HDAC9-212ENST00000432645 PPP2R3AQ06190 1150 aa9.13□□□□□ -0.95
HDAC9-212ENST00000432645 FOXR2Q6PJQ5 311 aa9.13□□□□□ -0.95
HDAC9-212ENST00000432645 RDH13Q8NBN7 331 aa9.13□□□□□ -0.95
HDAC9-212ENST00000432645 BAP1Q92560 729 aa9.13□□□□□ -0.95
HDAC9-212ENST00000432645 UBXN4Q92575 508 aa9.13□□□□□ -0.95
HDAC9-212ENST00000432645 TYW1Q9NV66 732 aaKnown RBP9.13□□□□□ -0.95
HDAC9-212ENST00000432645 TMOD4Q9NZQ9 345 aa9.13□□□□□ -0.95
HDAC9-212ENST00000432645 ZNF214Q9UL59 606 aaPredicted RBP9.13□□□□□ -0.95
HDAC9-212ENST00000432645 JRKLQ9Y4A0 524 aa9.13□□□□□ -0.95
HDAC9-212ENST00000432645 CTAGE9A4FU28 777 aa9.12□□□□□ -0.95
HDAC9-212ENST00000432645 H0YHG0 523 aa9.12□□□□□ -0.95
HDAC9-212ENST00000432645 GAP43P17677 238 aa9.12□□□□□ -0.95
HDAC9-212ENST00000432645 DSG3P32926 999 aa9.12□□□□□ -0.95
HDAC9-212ENST00000432645 EIF4A3P38919 411 aaKnown RBP9.12□□□□□ -0.95
HDAC9-212ENST00000432645 KRT83P78385 493 aa9.12□□□□□ -0.95
HDAC9-212ENST00000432645 SARNPP82979 210 aaKnown RBP9.12□□□□□ -0.95
HDAC9-212ENST00000432645 PPP2R5AQ15172 486 aa9.12□□□□□ -0.95
HDAC9-212ENST00000432645 TDRD12Q587J7 1177 aaKnown RBP9.12□□□□□ -0.95
HDAC9-212ENST00000432645 ZNF720Q7Z2F6 126 aa9.12□□□□□ -0.95
HDAC9-212ENST00000432645 DAW1Q8N136 415 aa9.12□□□□□ -0.95
HDAC9-212ENST00000432645 PROCA1Q8NCQ7 364 aaPredicted RBP9.12□□□□□ -0.95
HDAC9-212ENST00000432645 ATL2Q8NHH9 583 aa9.12□□□□□ -0.95
HDAC9-212ENST00000432645 JAKMIP2Q96AA8 810 aa9.12□□□□□ -0.95
HDAC9-212ENST00000432645 CCDC43Q96MW1 224 aaKnown RBP9.12□□□□□ -0.95
HDAC9-212ENST00000432645 SUDS3Q9H7L9 328 aaPredicted RBP9.12□□□□□ -0.95
HDAC9-212ENST00000432645 RNF181Q9P0P0 153 aa9.12□□□□□ -0.95
HDAC9-212ENST00000432645 TELO2Q9Y4R8 837 aa9.12□□□□□ -0.95
HDAC9-212ENST00000432645 FRMPD4Q14CM0 1322 aa9.12□□□□□ -0.95
HDAC9-212ENST00000432645 AKR1B10O60218 316 aa9.12□□□□□ -0.95
HDAC9-212ENST00000432645 USP2O75604 605 aaPredicted RBP9.12□□□□□ -0.95
HDAC9-212ENST00000432645 CCNE2O96020 404 aa9.12□□□□□ -0.95
HDAC9-212ENST00000432645 NR3C2P08235 984 aa9.12□□□□□ -0.95
HDAC9-212ENST00000432645 XRCC5P13010 732 aaKnown RBP9.12□□□□□ -0.95
HDAC9-212ENST00000432645 SLC9A1P19634 815 aa9.12□□□□□ -0.95
HDAC9-212ENST00000432645 QARSP47897 775 aaKnown RBP9.12□□□□□ -0.95
HDAC9-212ENST00000432645 CD151P48509 253 aa9.12□□□□□ -0.95
HDAC9-212ENST00000432645 CYP2J2P51589 502 aa9.12□□□□□ -0.95
HDAC9-212ENST00000432645 VGLL4Q14135 290 aa9.12□□□□□ -0.95
HDAC9-212ENST00000432645 SPA17Q15506 151 aa9.12□□□□□ -0.95
HDAC9-212ENST00000432645 SUPT20HL1Q3ZLR7 823 aa9.12□□□□□ -0.95
HDAC9-212ENST00000432645 TEX35Q5T0J7 233 aa9.12□□□□□ -0.95
HDAC9-212ENST00000432645 PLA2G4FQ68DD2 849 aa9.12□□□□□ -0.95
HDAC9-212ENST00000432645 FAM212AQ96EL1 285 aa9.12□□□□□ -0.95
HDAC9-212ENST00000432645 FIZ1Q96SL8 496 aa9.12□□□□□ -0.95
HDAC9-212ENST00000432645 AFG3L2Q9Y4W6 797 aa9.12□□□□□ -0.95
HDAC9-212ENST00000432645 SSC5DA1L4H1 1573 aa9.12□□□□□ -0.95
HDAC9-212ENST00000432645 ZMYM2Q9UBW7 1377 aa9.12□□□□□ -0.95
HDAC9-212ENST00000432645 EIF3CLB5ME19 914 aaKnown RBP9.11□□□□□ -0.95
HDAC9-212ENST00000432645 TISP43B9A030 160 aa9.11□□□□□ -0.95
HDAC9-212ENST00000432645 C19orf81C9J6K1 198 aa9.11□□□□□ -0.95
HDAC9-212ENST00000432645 YWHABP31946 246 aaKnown RBP9.11□□□□□ -0.95
HDAC9-212ENST00000432645 KIF11P52732 1056 aa9.11□□□□□ -0.95
HDAC9-212ENST00000432645 NPEPPSP55786 919 aa9.11□□□□□ -0.95
HDAC9-212ENST00000432645 MARSP56192 900 aaKnown RBP9.11□□□□□ -0.95
HDAC9-212ENST00000432645 GFPT1Q06210 699 aaPredicted RBP9.11□□□□□ -0.95
HDAC9-212ENST00000432645 CATSPERGQ6ZRH7 1159 aa9.11□□□□□ -0.95
HDAC9-212ENST00000432645 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.11□□□□□ -0.95
HDAC9-212ENST00000432645 RPAINQ86UA6 219 aa9.11□□□□□ -0.95
HDAC9-212ENST00000432645 CCDC170Q8IYT3 715 aa9.11□□□□□ -0.95
HDAC9-212ENST00000432645 REPS2Q8NFH8 660 aa9.11□□□□□ -0.95
HDAC9-212ENST00000432645 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.11□□□□□ -0.95
HDAC9-212ENST00000432645 EIF3CQ99613 913 aaKnown RBP9.11□□□□□ -0.95
HDAC9-212ENST00000432645 HAUS4Q9H6D7 363 aa9.11□□□□□ -0.95
HDAC9-212ENST00000432645 GPRC5CQ9NQ84 441 aa9.11□□□□□ -0.95
HDAC9-212ENST00000432645 HDAC6Q9UBN7 1215 aa9.11□□□□□ -0.95
HDAC9-212ENST00000432645 EPB41P11171 864 aaKnown RBP9.11□□□□□ -0.95
HDAC9-212ENST00000432645 NEFHP12036 1026 aa9.11□□□□□ -0.95
HDAC9-212ENST00000432645 RPL13P26373 211 aaKnown RBP9.11□□□□□ -0.95
HDAC9-212ENST00000432645 RARRES1P49788 294 aa9.11□□□□□ -0.95
HDAC9-212ENST00000432645 GHRHRQ02643 423 aa9.11□□□□□ -0.95
HDAC9-212ENST00000432645 RAPGEF1Q13905 1077 aa9.11□□□□□ -0.95
HDAC9-212ENST00000432645 BMT2Q1RMZ1 405 aa9.11□□□□□ -0.95
HDAC9-212ENST00000432645 TREML2Q5T2D2 321 aa9.11□□□□□ -0.95
HDAC9-212ENST00000432645 PDXDC1Q6P996 788 aa9.11□□□□□ -0.95
HDAC9-212ENST00000432645 NIPA1Q7RTP0 329 aa9.11□□□□□ -0.95
HDAC9-212ENST00000432645 ZC3H3Q8IXZ2 948 aaKnown RBP9.11□□□□□ -0.95
HDAC9-212ENST00000432645 SYCP3Q8IZU3 236 aa9.11□□□□□ -0.95
HDAC9-212ENST00000432645 KRT222Q8N1A0 295 aa9.11□□□□□ -0.95
HDAC9-212ENST00000432645 ANKRD13CQ8N6S4 541 aa9.11□□□□□ -0.95
HDAC9-212ENST00000432645 NAPGQ99747 312 aaPredicted RBP9.11□□□□□ -0.95
HDAC9-212ENST00000432645 IFIH1Q9BYX4 1025 aaKnown RBP9.11□□□□□ -0.95
HDAC9-212ENST00000432645 SPON1Q9HCB6 807 aa9.11□□□□□ -0.95
HDAC9-212ENST00000432645 TBC1D22BQ9NU19 505 aa9.11□□□□□ -0.95
HDAC9-212ENST00000432645 SPDYE16A6NNV3 312 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms