RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 AGBL4Q5VU57 503 aa4.92□□□□□ -1.62
CLK1-204ENST00000432425 SLFN12LQ6IEE8 588 aa4.92□□□□□ -1.62
CLK1-204ENST00000432425 USP30Q70CQ3 517 aa4.92□□□□□ -1.62
CLK1-204ENST00000432425 TAX1BP1Q86VP1 789 aa4.92□□□□□ -1.62
CLK1-204ENST00000432425 JAZF1Q86VZ6 243 aa4.92□□□□□ -1.62
CLK1-204ENST00000432425 NME9Q86XW9 330 aa4.92□□□□□ -1.62
CLK1-204ENST00000432425 NIM1KQ8IY84 436 aa4.92□□□□□ -1.62
CLK1-204ENST00000432425 DNERQ8NFT8 737 aa4.92□□□□□ -1.62
CLK1-204ENST00000432425 CDK5RAP1Q96SZ6 601 aaKnown RBP4.92□□□□□ -1.62
CLK1-204ENST00000432425 FEZ1Q99689 392 aa4.92□□□□□ -1.62
CLK1-204ENST00000432425 C1QTNF3Q9BXJ4 246 aa4.92□□□□□ -1.62
CLK1-204ENST00000432425 IFT57Q9NWB7 429 aa4.92□□□□□ -1.62
CLK1-204ENST00000432425 OAZ3Q9UMX2 235 aa4.92□□□□□ -1.62
CLK1-204ENST00000432425 MYRFQ9Y2G1 1151 aa4.92□□□□□ -1.62
CLK1-204ENST00000432425 CDC14BO60729 498 aa4.91□□□□□ -1.62
CLK1-204ENST00000432425 ZNF623O75123 536 aa4.91□□□□□ -1.62
CLK1-204ENST00000432425 SLC9A1P19634 815 aa4.91□□□□□ -1.62
CLK1-204ENST00000432425 CR2P20023 1033 aa4.91□□□□□ -1.62
CLK1-204ENST00000432425 RGS3P49796 1198 aa4.91□□□□□ -1.62
CLK1-204ENST00000432425 SELENOPP49908 381 aa4.91□□□□□ -1.62
CLK1-204ENST00000432425 STAT5BP51692 787 aa4.91□□□□□ -1.62
CLK1-204ENST00000432425 ADCY1Q08828 1119 aa4.91□□□□□ -1.62
CLK1-204ENST00000432425 NOLC1Q14978 699 aaKnown RBP eCLIP4.91□□□□□ -1.62
CLK1-204ENST00000432425 PRAMEF9Q5VWM5 478 aa4.91□□□□□ -1.62
CLK1-204ENST00000432425 TRIM68Q6AZZ1 485 aa4.91□□□□□ -1.62
CLK1-204ENST00000432425 ZNF585AQ6P3V2 769 aa4.91□□□□□ -1.62
CLK1-204ENST00000432425 LRRTM3Q86VH5 581 aa4.91□□□□□ -1.62
CLK1-204ENST00000432425 KIF18BQ86Y91 864 aa4.91□□□□□ -1.62
CLK1-204ENST00000432425 DHX37Q8IY37 1157 aaKnown RBP4.91□□□□□ -1.62
CLK1-204ENST00000432425 MAML3Q96JK9 1138 aa4.91□□□□□ -1.62
CLK1-204ENST00000432425 TUBGCP5Q96RT8 1024 aa4.91□□□□□ -1.62
CLK1-204ENST00000432425 ORAI3Q9BRQ5 295 aa4.91□□□□□ -1.62
CLK1-204ENST00000432425 KRTAP3-1Q9BYR8 98 aa4.91□□□□□ -1.62
CLK1-204ENST00000432425 KLC2Q9H0B6 622 aa4.91□□□□□ -1.62
CLK1-204ENST00000432425 OR10A2Q9H208 303 aa4.91□□□□□ -1.62
CLK1-204ENST00000432425 CD248Q9HCU0 757 aa4.91□□□□□ -1.62
CLK1-204ENST00000432425 SAE1Q9UBE0 346 aaPredicted RBP4.91□□□□□ -1.62
CLK1-204ENST00000432425 PUF60Q9UHX1 559 aaKnown RBP4.91□□□□□ -1.62
CLK1-204ENST00000432425 ZFR2Q9UPR6 939 aaKnown RBP4.91□□□□□ -1.62
CLK1-204ENST00000432425 PUM1Q14671 1186 aaKnown RBP eCLIP4.9□□□□□ -1.62
CLK1-204ENST00000432425 EPHA7Q15375 998 aa4.9□□□□□ -1.62
CLK1-204ENST00000432425 LCE5AQ5TCM9 118 aa4.9□□□□□ -1.62
CLK1-204ENST00000432425 TCTN3Q6NUS6 607 aa4.9□□□□□ -1.62
CLK1-204ENST00000432425 GGNQ86UU5 652 aa4.9□□□□□ -1.62
CLK1-204ENST00000432425 Q8TCH9 128 aa4.9□□□□□ -1.62
CLK1-204ENST00000432425 C16orf92Q96LL3 132 aa4.9□□□□□ -1.62
CLK1-204ENST00000432425 ELF4Q99607 663 aaPredicted RBP4.9□□□□□ -1.62
CLK1-204ENST00000432425 DPYSL5Q9BPU6 564 aa4.9□□□□□ -1.62
CLK1-204ENST00000432425 TOMM22Q9NS69 142 aa4.9□□□□□ -1.62
CLK1-204ENST00000432425 OXSMQ9NWU1 459 aa4.9□□□□□ -1.62
CLK1-204ENST00000432425 PLAAQ9Y263 795 aa4.9□□□□□ -1.62
CLK1-204ENST00000432425 ATP2A2P16615 1042 aaKnown RBP4.89□□□□□ -1.63
CLK1-204ENST00000432425 POU3F2P20265 443 aaPredicted RBP4.89□□□□□ -1.63
CLK1-204ENST00000432425 PTX3P26022 381 aaPredicted RBP4.89□□□□□ -1.63
CLK1-204ENST00000432425 SART3Q15020 963 aaKnown RBP4.89□□□□□ -1.63
CLK1-204ENST00000432425 TBR1Q16650 682 aa4.89□□□□□ -1.63
CLK1-204ENST00000432425 NOP9Q86U38 636 aaKnown RBP4.89□□□□□ -1.63
CLK1-204ENST00000432425 PASD1Q8IV76 773 aa4.89□□□□□ -1.63
CLK1-204ENST00000432425 ZZZ3Q8IYH5 903 aa4.89□□□□□ -1.63
CLK1-204ENST00000432425 AHI1Q8N157 1196 aa4.89□□□□□ -1.63
CLK1-204ENST00000432425 PPM1KQ8N3J5 372 aa4.89□□□□□ -1.63
CLK1-204ENST00000432425 C7orf31Q8N865 590 aa4.89□□□□□ -1.63
CLK1-204ENST00000432425 OR5AN1Q8NGI8 311 aa4.89□□□□□ -1.63
CLK1-204ENST00000432425 OR14K1Q8NGZ2 314 aa4.89□□□□□ -1.63
CLK1-204ENST00000432425 RPGRQ92834 1020 aaKnown RBP4.89□□□□□ -1.63
CLK1-204ENST00000432425 VWA7Q9Y334 891 aa4.89□□□□□ -1.63
CLK1-204ENST00000432425 TSC22D4Q9Y3Q8 395 aa4.89□□□□□ -1.63
CLK1-204ENST00000432425 SPO11Q9Y5K1 396 aa4.89□□□□□ -1.63
CLK1-204ENST00000432425 MUSKO15146 869 aa4.89□□□□□ -1.63
CLK1-204ENST00000432425 FOXS1O43638 330 aa4.89□□□□□ -1.63
CLK1-204ENST00000432425 H2AFYO75367 372 aaKnown RBP4.89□□□□□ -1.63
CLK1-204ENST00000432425 F2P00734 622 aa4.89□□□□□ -1.63
CLK1-204ENST00000432425 SESN2P58004 480 aaPredicted RBP4.89□□□□□ -1.63
CLK1-204ENST00000432425 DGKDQ16760 1214 aa4.89□□□□□ -1.63
CLK1-204ENST00000432425 TIGD7Q6NT04 549 aaPredicted RBP4.89□□□□□ -1.63
CLK1-204ENST00000432425 KLHDC10Q6PID8 442 aa4.89□□□□□ -1.63
CLK1-204ENST00000432425 PALM2Q8IXS6 379 aa4.89□□□□□ -1.63
CLK1-204ENST00000432425 NXPE1Q8N323 547 aa4.89□□□□□ -1.63
CLK1-204ENST00000432425 MFSD3Q96ES6 412 aa4.89□□□□□ -1.63
CLK1-204ENST00000432425 OR14A2Q96R54 314 aa4.89□□□□□ -1.63
CLK1-204ENST00000432425 SEMA4AQ9H3S1 761 aa4.89□□□□□ -1.63
CLK1-204ENST00000432425 MSL2Q9HCI7 577 aa4.89□□□□□ -1.63
CLK1-204ENST00000432425 C1QTNF3-AMACRE9PGA6 284 aa4.88□□□□□ -1.63
CLK1-204ENST00000432425 MAFGO15525 162 aa4.88□□□□□ -1.63
CLK1-204ENST00000432425 RAD17O75943 681 aa4.88□□□□□ -1.63
CLK1-204ENST00000432425 RPS19P39019 145 aaKnown RBP4.88□□□□□ -1.63
CLK1-204ENST00000432425 BCAR1P56945 870 aa4.88□□□□□ -1.63
CLK1-204ENST00000432425 TAF7LQ5H9L4 462 aa4.88□□□□□ -1.63
CLK1-204ENST00000432425 CREB3L3Q68CJ9 461 aa4.88□□□□□ -1.63
CLK1-204ENST00000432425 ESRP1Q6NXG1 681 aaKnown RBP4.88□□□□□ -1.63
CLK1-204ENST00000432425 PHYKPLQ8IUZ5 450 aa4.88□□□□□ -1.63
CLK1-204ENST00000432425 FUKQ8N0W3 1084 aa4.88□□□□□ -1.63
CLK1-204ENST00000432425 EFHBQ8N7U6 833 aa4.88□□□□□ -1.63
CLK1-204ENST00000432425 CHTF18Q8WVB6 975 aa4.88□□□□□ -1.63
CLK1-204ENST00000432425 LPPQ93052 612 aa4.88□□□□□ -1.63
CLK1-204ENST00000432425 GFM2Q969S9 779 aaKnown RBP4.88□□□□□ -1.63
CLK1-204ENST00000432425 PLA2G12BQ9BX93 195 aa4.88□□□□□ -1.63
CLK1-204ENST00000432425 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.88□□□□□ -1.63
CLK1-204ENST00000432425 THG1LQ9NWX6 298 aaKnown RBP4.88□□□□□ -1.63
CLK1-204ENST00000432425 KCMF1Q9P0J7 381 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms