RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 SLC24A5Q71RS6 500 aa9.46□□□□□ -0.9
CDH13-203ENST00000431540 RTN4RL1Q86UN2 441 aaPredicted RBP9.46□□□□□ -0.9
CDH13-203ENST00000431540 RNF135Q8IUD6 432 aa9.46□□□□□ -0.9
CDH13-203ENST00000431540 ATP8B4Q8TF62 1192 aa9.46□□□□□ -0.9
CDH13-203ENST00000431540 PHF7Q9BWX1 381 aaPredicted RBP9.46□□□□□ -0.9
CDH13-203ENST00000431540 RGS18Q9NS28 235 aa9.46□□□□□ -0.9
CDH13-203ENST00000431540 KCNH7Q9NS40 1196 aa9.46□□□□□ -0.9
CDH13-203ENST00000431540 PADI3Q9ULW8 664 aa9.46□□□□□ -0.9
CDH13-203ENST00000431540 PCDHA6Q9UN73 950 aa9.46□□□□□ -0.9
CDH13-203ENST00000431540 PCDHB7Q9Y5E2 793 aa9.46□□□□□ -0.9
CDH13-203ENST00000431540 PCDHA8Q9Y5H6 950 aa9.46□□□□□ -0.9
CDH13-203ENST00000431540 ZDBF2Q9HCK1 2354 aa9.45□□□□□ -0.9
CDH13-203ENST00000431540 ITGB1P05556 798 aa9.45□□□□□ -0.9
CDH13-203ENST00000431540 MRE11P49959 708 aa9.45□□□□□ -0.9
CDH13-203ENST00000431540 ANTXR2P58335 489 aa9.45□□□□□ -0.9
CDH13-203ENST00000431540 KRT76Q01546 638 aa9.45□□□□□ -0.9
CDH13-203ENST00000431540 PAK2Q13177 524 aa9.45□□□□□ -0.9
CDH13-203ENST00000431540 TSGA10IPQ3SY00 556 aa9.45□□□□□ -0.9
CDH13-203ENST00000431540 FAM160B1Q5W0V3 765 aa9.45□□□□□ -0.9
CDH13-203ENST00000431540 MTHFD1LQ6UB35 978 aa9.45□□□□□ -0.9
CDH13-203ENST00000431540 RUFY4Q6ZNE9 571 aa9.45□□□□□ -0.9
CDH13-203ENST00000431540 SRBD1Q8N5C6 995 aaKnown RBP9.45□□□□□ -0.9
CDH13-203ENST00000431540 FBXL18Q96ME1 805 aa9.45□□□□□ -0.9
CDH13-203ENST00000431540 LARP6Q9BRS8 491 aaKnown RBP9.45□□□□□ -0.9
CDH13-203ENST00000431540 OSBPL7Q9BZF2 842 aa9.45□□□□□ -0.9
CDH13-203ENST00000431540 AGO3Q9H9G7 860 aaKnown RBP9.45□□□□□ -0.9
CDH13-203ENST00000431540 NGRNQ9NPE2 291 aaKnown RBP9.45□□□□□ -0.9
CDH13-203ENST00000431540 RIC8AQ9NPQ8 531 aa9.45□□□□□ -0.9
CDH13-203ENST00000431540 TBC1D22BQ9NU19 505 aa9.45□□□□□ -0.9
CDH13-203ENST00000431540 STK39Q9UEW8 545 aa9.45□□□□□ -0.9
CDH13-203ENST00000431540 PUF60Q9UHX1 559 aaKnown RBP9.45□□□□□ -0.9
CDH13-203ENST00000431540 LRFN2Q9ULH4 789 aa9.45□□□□□ -0.9
CDH13-203ENST00000431540 CEP131Q9UPN4 1083 aa9.45□□□□□ -0.9
CDH13-203ENST00000431540 SLC12A7Q9Y666 1083 aa9.45□□□□□ -0.9
CDH13-203ENST00000431540 WDFY4Q6ZS81 3184 aa9.45□□□□□ -0.9
CDH13-203ENST00000431540 CACNA1HO95180 2353 aa9.45□□□□□ -0.9
CDH13-203ENST00000431540 FAM86C2PA6NEL3 165 aa9.44□□□□□ -0.9
CDH13-203ENST00000431540 FAM187AA6NFU0 413 aa9.44□□□□□ -0.9
CDH13-203ENST00000431540 SH2B2O14492 632 aaPredicted RBP9.44□□□□□ -0.9
CDH13-203ENST00000431540 MAGEB2O15479 319 aa9.44□□□□□ -0.9
CDH13-203ENST00000431540 PRC1O43663 620 aa9.44□□□□□ -0.9
CDH13-203ENST00000431540 CYP3A4P08684 503 aa9.44□□□□□ -0.9
CDH13-203ENST00000431540 GSPT1P15170 499 aaKnown RBP9.44□□□□□ -0.9
CDH13-203ENST00000431540 CD52P31358 61 aa9.44□□□□□ -0.9
CDH13-203ENST00000431540 PPM1AP35813 382 aa9.44□□□□□ -0.9
CDH13-203ENST00000431540 CRYBB1P53674 252 aaPredicted RBP9.44□□□□□ -0.9
CDH13-203ENST00000431540 ACTR2P61160 394 aa9.44□□□□□ -0.9
CDH13-203ENST00000431540 SIGLEC14Q08ET2 396 aa9.44□□□□□ -0.9
CDH13-203ENST00000431540 BMS1Q14692 1282 aaKnown RBP9.44□□□□□ -0.9
CDH13-203ENST00000431540 PLCB4Q15147 1175 aa9.44□□□□□ -0.9
CDH13-203ENST00000431540 NECTIN1Q15223 517 aa9.44□□□□□ -0.9
CDH13-203ENST00000431540 RNF20Q5VTR2 975 aa9.44□□□□□ -0.9
CDH13-203ENST00000431540 ABHD15Q6UXT9 468 aa9.44□□□□□ -0.9
CDH13-203ENST00000431540 NFXL1Q6ZNB6 911 aa9.44□□□□□ -0.9
CDH13-203ENST00000431540 ALYREFQ86V81 257 aaKnown RBP9.44□□□□□ -0.9
CDH13-203ENST00000431540 TRIM50Q86XT4 487 aa9.44□□□□□ -0.9
CDH13-203ENST00000431540 SMAP1Q8IYB5 467 aaPredicted RBP9.44□□□□□ -0.9
CDH13-203ENST00000431540 KLHL23Q8NBE8 558 aa9.44□□□□□ -0.9
CDH13-203ENST00000431540 POF1BQ8WVV4 589 aa9.44□□□□□ -0.9
CDH13-203ENST00000431540 BBXQ8WY36 941 aaPredicted RBP9.44□□□□□ -0.9
CDH13-203ENST00000431540 SUSD6Q92537 303 aa9.44□□□□□ -0.9
CDH13-203ENST00000431540 PCYT2Q99447 389 aa9.44□□□□□ -0.9
CDH13-203ENST00000431540 IL25Q9H293 177 aa9.44□□□□□ -0.9
CDH13-203ENST00000431540 SENP2Q9HC62 589 aa9.44□□□□□ -0.9
CDH13-203ENST00000431540 TMEM161AQ9NX61 479 aa9.44□□□□□ -0.9
CDH13-203ENST00000431540 CLEC1BQ9P126 229 aa9.44□□□□□ -0.9
CDH13-203ENST00000431540 KMT2EQ8IZD2 1858 aa9.43□□□□□ -0.9
CDH13-203ENST00000431540 CCDC196A0A1B0GTZ2 297 aa9.43□□□□□ -0.9
CDH13-203ENST00000431540 C9IYK1 514 aa9.43□□□□□ -0.9
CDH13-203ENST00000431540 TBX10O75333 385 aa9.43□□□□□ -0.9
CDH13-203ENST00000431540 RPS6KA5O75582 802 aa9.43□□□□□ -0.9
CDH13-203ENST00000431540 EOMESO95936 686 aa9.43□□□□□ -0.9
CDH13-203ENST00000431540 HMGB1P09429 215 aaKnown RBP9.43□□□□□ -0.9
CDH13-203ENST00000431540 LAG3P18627 525 aa9.43□□□□□ -0.9
CDH13-203ENST00000431540 KLRC1P26715 233 aa9.43□□□□□ -0.9
CDH13-203ENST00000431540 SREBF1P36956 1147 aa9.43□□□□□ -0.9
CDH13-203ENST00000431540 NDUFV1P49821 464 aa9.43□□□□□ -0.9
CDH13-203ENST00000431540 ZXDAP98168 799 aa9.43□□□□□ -0.9
CDH13-203ENST00000431540 FOXK2Q01167 660 aa9.43□□□□□ -0.9
CDH13-203ENST00000431540 DLX2Q07687 328 aaPredicted RBP9.43□□□□□ -0.9
CDH13-203ENST00000431540 KCNC3Q14003 757 aa9.43□□□□□ -0.9
CDH13-203ENST00000431540 GIT2Q14161 759 aa9.43□□□□□ -0.9
CDH13-203ENST00000431540 ZNF746Q6NUN9 644 aaPredicted RBP9.43□□□□□ -0.9
CDH13-203ENST00000431540 EP400NLQ6ZTU2 488 aa9.43□□□□□ -0.9
CDH13-203ENST00000431540 HFE2Q6ZVN8 426 aa9.43□□□□□ -0.9
CDH13-203ENST00000431540 TMTC3Q6ZXV5 915 aa9.43□□□□□ -0.9
CDH13-203ENST00000431540 ZNF598Q86UK7 904 aaKnown RBP9.43□□□□□ -0.9
CDH13-203ENST00000431540 KIAA0319LQ8IZA0 1049 aa9.43□□□□□ -0.9
CDH13-203ENST00000431540 FAM177A1Q8N128 213 aaPredicted RBP9.43□□□□□ -0.9
CDH13-203ENST00000431540 FBXL6Q8N531 539 aa9.43□□□□□ -0.9
CDH13-203ENST00000431540 CCDC12Q8WUD4 166 aaPredicted RBP9.43□□□□□ -0.9
CDH13-203ENST00000431540 NECTIN4Q96NY8 510 aa9.43□□□□□ -0.9
CDH13-203ENST00000431540 NEK1Q96PY6 1258 aa9.43□□□□□ -0.9
CDH13-203ENST00000431540 UIMC1Q96RL1 719 aa9.43□□□□□ -0.9
CDH13-203ENST00000431540 TLE6Q9H808 572 aa9.43□□□□□ -0.9
CDH13-203ENST00000431540 ERVK-5Q9HDB9 667 aa9.43□□□□□ -0.9
CDH13-203ENST00000431540 ALG13Q9NP73 1137 aaKnown RBP9.43□□□□□ -0.9
CDH13-203ENST00000431540 TLR9Q9NR96 1032 aa9.43□□□□□ -0.9
CDH13-203ENST00000431540 DAXXQ9UER7 740 aaPredicted RBP9.43□□□□□ -0.9
CDH13-203ENST00000431540 MAFBQ9Y5Q3 323 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms