RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 GIT1Q9Y2X7 761 aa3.13□□□□□ -1.91
CDC40-204ENST00000431461 SHROOM4Q9ULL8 1493 aa3.13□□□□□ -1.91
CDC40-204ENST00000431461 KDM2BQ8NHM5 1336 aa3.13□□□□□ -1.91
CDC40-204ENST00000431461 TCRBV5S4A2TA0A5A2 114 aa3.12□□□□□ -1.91
CDC40-204ENST00000431461 CCDC85CA6NKD9 419 aa3.12□□□□□ -1.91
CDC40-204ENST00000431461 FAM90A27PA6NNH2 459 aa3.12□□□□□ -1.91
CDC40-204ENST00000431461 AQP7O14520 342 aa3.12□□□□□ -1.91
CDC40-204ENST00000431461 CYP27B1O15528 508 aa3.12□□□□□ -1.91
CDC40-204ENST00000431461 HMGCRP04035 888 aa3.12□□□□□ -1.91
CDC40-204ENST00000431461 SOD2P04179 222 aa3.12□□□□□ -1.91
CDC40-204ENST00000431461 NCLP19338 710 aaKnown RBP3.12□□□□□ -1.91
CDC40-204ENST00000431461 CD38P28907 300 aa3.12□□□□□ -1.91
CDC40-204ENST00000431461 GJA4P35212 333 aa3.12□□□□□ -1.91
CDC40-204ENST00000431461 ADCY8P40145 1251 aa3.12□□□□□ -1.91
CDC40-204ENST00000431461 IL13RA1P78552 427 aa3.12□□□□□ -1.91
CDC40-204ENST00000431461 STILQ15468 1287 aa3.12□□□□□ -1.91
CDC40-204ENST00000431461 TCEA2Q15560 299 aa3.12□□□□□ -1.91
CDC40-204ENST00000431461 WDR72Q3MJ13 1102 aa3.12□□□□□ -1.91
CDC40-204ENST00000431461 STYK1Q6J9G0 422 aa3.12□□□□□ -1.91
CDC40-204ENST00000431461 KCNT2Q6UVM3 1135 aa3.12□□□□□ -1.91
CDC40-204ENST00000431461 GPR135Q8IZ08 494 aa3.12□□□□□ -1.91
CDC40-204ENST00000431461 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.12□□□□□ -1.91
CDC40-204ENST00000431461 SH3RF2Q8TEC5 729 aa3.12□□□□□ -1.91
CDC40-204ENST00000431461 MRPL4Q9BYD3 311 aaKnown RBP3.12□□□□□ -1.91
CDC40-204ENST00000431461 TMEM260Q9NX78 707 aa3.12□□□□□ -1.91
CDC40-204ENST00000431461 PRKAB1Q9Y478 270 aa3.12□□□□□ -1.91
CDC40-204ENST00000431461 B4E1Z4 1266 aa3.11□□□□□ -1.91
CDC40-204ENST00000431461 GSTA4O15217 222 aa3.11□□□□□ -1.91
CDC40-204ENST00000431461 CDC45O75419 566 aa3.11□□□□□ -1.91
CDC40-204ENST00000431461 NPTXRO95502 500 aa3.11□□□□□ -1.91
CDC40-204ENST00000431461 LMNAP02545 664 aaKnown RBP3.11□□□□□ -1.91
CDC40-204ENST00000431461 PABPC1P11940 636 aaKnown RBP3.11□□□□□ -1.91
CDC40-204ENST00000431461 PTPN1P18031 435 aaKnown RBP3.11□□□□□ -1.91
CDC40-204ENST00000431461 PTGS1P23219 599 aa3.11□□□□□ -1.91
CDC40-204ENST00000431461 KCNQ1P51787 676 aa3.11□□□□□ -1.91
CDC40-204ENST00000431461 GABREP78334 506 aa3.11□□□□□ -1.91
CDC40-204ENST00000431461 HGFACQ04756 655 aa3.11□□□□□ -1.91
CDC40-204ENST00000431461 PCOLCEQ15113 449 aa3.11□□□□□ -1.91
CDC40-204ENST00000431461 NTRK3Q16288 839 aa3.11□□□□□ -1.91
CDC40-204ENST00000431461 FNDC3BQ53EP0 1204 aaKnown RBP3.11□□□□□ -1.91
CDC40-204ENST00000431461 COLEC12Q5KU26 742 aa3.11□□□□□ -1.91
CDC40-204ENST00000431461 SPTY2D1Q68D10 685 aaPredicted RBP3.11□□□□□ -1.91
CDC40-204ENST00000431461 KRTAP5-4Q6L8H1 288 aa3.11□□□□□ -1.91
CDC40-204ENST00000431461 NSMFQ6X4W1 530 aa3.11□□□□□ -1.91
CDC40-204ENST00000431461 C16orf86Q6ZW13 317 aa3.11□□□□□ -1.91
CDC40-204ENST00000431461 GAREM2Q75VX8 874 aa3.11□□□□□ -1.91
CDC40-204ENST00000431461 D2HGDHQ8N465 521 aa3.11□□□□□ -1.91
CDC40-204ENST00000431461 OR14K1Q8NGZ2 314 aa3.11□□□□□ -1.91
CDC40-204ENST00000431461 MPHOSPH9Q99550 1183 aa3.11□□□□□ -1.91
CDC40-204ENST00000431461 DNAJC7Q99615 494 aa3.11□□□□□ -1.91
CDC40-204ENST00000431461 FEZ1Q99689 392 aa3.11□□□□□ -1.91
CDC40-204ENST00000431461 DHRS4Q9BTZ2 278 aa3.11□□□□□ -1.91
CDC40-204ENST00000431461 CD244Q9BZW8 370 aa3.11□□□□□ -1.91
CDC40-204ENST00000431461 OR10A2Q9H208 303 aa3.11□□□□□ -1.91
CDC40-204ENST00000431461 IPPKQ9H8X2 491 aa3.11□□□□□ -1.91
CDC40-204ENST00000431461 INCENPQ9NQS7 918 aa3.11□□□□□ -1.91
CDC40-204ENST00000431461 INTS7Q9NVH2 962 aaKnown RBP3.11□□□□□ -1.91
CDC40-204ENST00000431461 ARHGAP28Q9P2N2 729 aa3.11□□□□□ -1.91
CDC40-204ENST00000431461 ZNHIT2Q9UHR6 403 aa3.11□□□□□ -1.91
CDC40-204ENST00000431461 TRBV23-1A0A0A0MS06 115 aa3.1□□□□□ -1.91
CDC40-204ENST00000431461 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.1□□□□□ -1.91
CDC40-204ENST00000431461 WNT9AO14904 365 aa3.1□□□□□ -1.91
CDC40-204ENST00000431461 PLD2O14939 933 aa3.1□□□□□ -1.91
CDC40-204ENST00000431461 IGSF3O75054 1194 aa3.1□□□□□ -1.91
CDC40-204ENST00000431461 RFPL3O75679 317 aa3.1□□□□□ -1.91
CDC40-204ENST00000431461 GCP02774 474 aa3.1□□□□□ -1.91
CDC40-204ENST00000431461 ZNF37AP17032 561 aaPredicted RBP3.1□□□□□ -1.91
CDC40-204ENST00000431461 CTGFP29279 349 aa3.1□□□□□ -1.91
CDC40-204ENST00000431461 FLT3P36888 993 aa3.1□□□□□ -1.91
CDC40-204ENST00000431461 MRE11P49959 708 aa3.1□□□□□ -1.91
CDC40-204ENST00000431461 HERVK_113P62684 666 aa3.1□□□□□ -1.91
CDC40-204ENST00000431461 RRP1BQ14684 758 aaKnown RBP3.1□□□□□ -1.91
CDC40-204ENST00000431461 GPR19Q15760 415 aa3.1□□□□□ -1.91
CDC40-204ENST00000431461 LCE1EQ5T753 118 aa3.1□□□□□ -1.91
CDC40-204ENST00000431461 TMEM200BQ69YZ2 307 aa3.1□□□□□ -1.91
CDC40-204ENST00000431461 SDE2Q6IQ49 451 aa3.1□□□□□ -1.91
CDC40-204ENST00000431461 MICALCLQ6ZW33 695 aa3.1□□□□□ -1.91
CDC40-204ENST00000431461 SH3TC2Q8TF17 1288 aa3.1□□□□□ -1.91
CDC40-204ENST00000431461 PTPRN2Q92932 1015 aa3.1□□□□□ -1.91
CDC40-204ENST00000431461 BTBD2Q9BX70 525 aa3.1□□□□□ -1.91
CDC40-204ENST00000431461 RIOX1Q9H6W3 641 aa3.1□□□□□ -1.91
CDC40-204ENST00000431461 NRDE2Q9H7Z3 1164 aa3.1□□□□□ -1.91
CDC40-204ENST00000431461 RIC8BQ9NVN3 520 aa3.1□□□□□ -1.91
CDC40-204ENST00000431461 SRPK3Q9UPE1 567 aa3.1□□□□□ -1.91
CDC40-204ENST00000431461 A0A0G2JNJ9 132 aa3.09□□□□□ -1.91
CDC40-204ENST00000431461 FAM221BA6H8Z2 402 aa3.09□□□□□ -1.91
CDC40-204ENST00000431461 PPP1R12AO14974 1030 aaPredicted RBP3.09□□□□□ -1.91
CDC40-204ENST00000431461 PRODHO43272 600 aa3.09□□□□□ -1.91
CDC40-204ENST00000431461 SLC26A4O43511 780 aa3.09□□□□□ -1.91
CDC40-204ENST00000431461 KCNQ2O43526 872 aa3.09□□□□□ -1.91
CDC40-204ENST00000431461 ADCY3O60266 1144 aa3.09□□□□□ -1.91
CDC40-204ENST00000431461 FAM20BO75063 409 aa3.09□□□□□ -1.91
CDC40-204ENST00000431461 AOAHP28039 575 aa3.09□□□□□ -1.91
CDC40-204ENST00000431461 MEOX1P50221 254 aa3.09□□□□□ -1.91
CDC40-204ENST00000431461 PLEKHG4Q58EX7 1191 aa3.09□□□□□ -1.91
CDC40-204ENST00000431461 TRIM61Q5EBN2 209 aa3.09□□□□□ -1.91
CDC40-204ENST00000431461 EPHA10Q5JZY3 1008 aa3.09□□□□□ -1.91
CDC40-204ENST00000431461 RNF187Q5TA31 235 aaPredicted RBP3.09□□□□□ -1.91
CDC40-204ENST00000431461 PAPD7Q5XG87 772 aaKnown RBP3.09□□□□□ -1.91
CDC40-204ENST00000431461 ARHGAP36Q6ZRI8 547 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms