RNA–Protein interactions for RNA: ENST00000430591.1

SMC6-205, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-205ENST00000430591 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.48□□□□□ -1.21
SMC6-205ENST00000430591 LRRC8DQ7L1W4 858 aa7.48□□□□□ -1.21
SMC6-205ENST00000430591 NIPA1Q7RTP0 329 aa7.48□□□□□ -1.21
SMC6-205ENST00000430591 DIS3L2Q8IYB7 885 aaKnown RBP7.48□□□□□ -1.21
SMC6-205ENST00000430591 TMEM199Q8N511 208 aa7.48□□□□□ -1.21
SMC6-205ENST00000430591 CCDC12Q8WUD4 166 aaPredicted RBP7.48□□□□□ -1.21
SMC6-205ENST00000430591 GLG1Q92896 1179 aa7.48□□□□□ -1.21
SMC6-205ENST00000430591 SLC5A5Q92911 643 aa7.48□□□□□ -1.21
SMC6-205ENST00000430591 TMX3Q96JJ7 454 aa7.48□□□□□ -1.21
SMC6-205ENST00000430591 MBOAT7Q96N66 472 aa7.48□□□□□ -1.21
SMC6-205ENST00000430591 GUCD1Q96NT3 240 aa7.48□□□□□ -1.21
SMC6-205ENST00000430591 SDF4Q9BRK5 362 aa7.48□□□□□ -1.21
SMC6-205ENST00000430591 FAM49AQ9H0Q0 323 aaPredicted RBP7.48□□□□□ -1.21
SMC6-205ENST00000430591 TMEM60Q9H2L4 133 aa7.48□□□□□ -1.21
SMC6-205ENST00000430591 EHMT1Q9H9B1 1298 aa7.48□□□□□ -1.21
SMC6-205ENST00000430591 GABBR1Q9UBS5 961 aa7.48□□□□□ -1.21
SMC6-205ENST00000430591 EMSYQ7Z589 1322 aa7.48□□□□□ -1.21
SMC6-205ENST00000430591 COL4A6Q14031 1691 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 LCHNA4D1U4 455 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 ZBBXA8MT70 800 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 RFXAPO00287 272 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 BACH1O14867 736 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 CCNT1O60563 726 aaKnown RBP7.47□□□□□ -1.21
SMC6-205ENST00000430591 PSMD10O75832 226 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 CDKL5O76039 1030 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 FGBP02675 491 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 CHRNA1P02708 482 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 GHRP10912 638 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 SELPP16109 830 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 KRT2P35908 639 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 STAT5BP51692 787 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 PTPN11Q06124 597 aaPredicted RBP7.47□□□□□ -1.21
SMC6-205ENST00000430591 MGAT3Q09327 533 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 DRP2Q13474 957 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 RABEP1Q15276 862 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 Q4G0T1 1027 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 LRCH2Q5VUJ6 765 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 PLA2G4FQ68DD2 849 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 PDXDC2PQ6P474 469 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 B3GNT9Q6UX72 402 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 KRT25Q7Z3Z0 450 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 LRRC71Q8N4P6 559 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 DEFB123Q8N688 67 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 BANK1Q8NDB2 785 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 DBF4BQ8NFT6 615 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 BICD2Q8TD16 824 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 DNAJB3Q8WWF6 145 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 LINC01599Q8WXQ3 324 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 HERVK_113Q902F9 699 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 CDHR1Q96JP9 859 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 KATNAL1Q9BW62 490 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 PBX4Q9BYU1 374 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 FTOQ9C0B1 505 aaKnown RBP eCLIP7.47□□□□□ -1.21
SMC6-205ENST00000430591 GLT8D2Q9H1C3 349 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 NKX2-4Q9H2Z4 354 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 DDX25Q9UHL0 483 aaKnown RBP7.47□□□□□ -1.21
SMC6-205ENST00000430591 VAV3Q9UKW4 847 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 COL4A4P53420 1690 aaPredicted RBP7.47□□□□□ -1.21
SMC6-205ENST00000430591 IGSF9BQ9UPX0 1349 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 REV3LO60673 3130 aa7.47□□□□□ -1.21
SMC6-205ENST00000430591 ATG2AQ2TAZ0 1938 aa7.46□□□□□ -1.21
SMC6-205ENST00000430591 KIAA1671Q9BY89 1806 aa7.46□□□□□ -1.21
SMC6-205ENST00000430591 CYP3A7-CYP3A51PA0A087WV96 503 aa7.46□□□□□ -1.22
SMC6-205ENST00000430591 CCDC194A0A1B0GVG4 234 aa7.46□□□□□ -1.22
SMC6-205ENST00000430591 A0A1W2PPC1 479 aa7.46□□□□□ -1.22
SMC6-205ENST00000430591 MBLAC1A4D2B0 266 aaPredicted RBP7.46□□□□□ -1.22
SMC6-205ENST00000430591 EPOPA6NHQ4 379 aa7.46□□□□□ -1.22
SMC6-205ENST00000430591 MAFGO15525 162 aa7.46□□□□□ -1.22
SMC6-205ENST00000430591 GAS7O60861 476 aa7.46□□□□□ -1.22
SMC6-205ENST00000430591 CYP3A7P24462 503 aa7.46□□□□□ -1.22
SMC6-205ENST00000430591 TOB1P50616 345 aaPredicted RBP7.46□□□□□ -1.22
SMC6-205ENST00000430591 CLCN3P51790 818 aa7.46□□□□□ -1.22
SMC6-205ENST00000430591 PRKCEQ02156 737 aa7.46□□□□□ -1.22
SMC6-205ENST00000430591 RBL2Q08999 1139 aa7.46□□□□□ -1.22
SMC6-205ENST00000430591 SPIRE1Q08AE8 756 aa7.46□□□□□ -1.22
SMC6-205ENST00000430591 TMEM266Q2M3C6 531 aa7.46□□□□□ -1.22
SMC6-205ENST00000430591 MTHFD1LQ6UB35 978 aa7.46□□□□□ -1.22
SMC6-205ENST00000430591 NEK8Q86SG6 692 aa7.46□□□□□ -1.22
SMC6-205ENST00000430591 RETREG2Q8NC44 543 aa7.46□□□□□ -1.22
SMC6-205ENST00000430591 GIMAP8Q8ND71 665 aaPredicted RBP7.46□□□□□ -1.22
SMC6-205ENST00000430591 AFAP1L1Q8TED9 768 aa7.46□□□□□ -1.22
SMC6-205ENST00000430591 TMEM40Q8WWA1 233 aa7.46□□□□□ -1.22
SMC6-205ENST00000430591 MYLIPQ8WY64 445 aa7.46□□□□□ -1.22
SMC6-205ENST00000430591 C8orf76Q96K31 380 aa7.46□□□□□ -1.22
SMC6-205ENST00000430591 SMARCAD1Q9H4L7 1026 aa7.46□□□□□ -1.22
SMC6-205ENST00000430591 AGO3Q9H9G7 860 aaKnown RBP7.46□□□□□ -1.22
SMC6-205ENST00000430591 CERS4Q9HA82 394 aa7.46□□□□□ -1.22
SMC6-205ENST00000430591 KCNMB3Q9NPA1 279 aa7.46□□□□□ -1.22
SMC6-205ENST00000430591 ZNF302Q9NR11 478 aa7.46□□□□□ -1.22
SMC6-205ENST00000430591 MTMR10Q9NXD2 777 aa7.46□□□□□ -1.22
SMC6-205ENST00000430591 ERAP1Q9NZ08 941 aa7.46□□□□□ -1.22
SMC6-205ENST00000430591 RGL1Q9NZL6 768 aa7.46□□□□□ -1.22
SMC6-205ENST00000430591 TUBE1Q9UJT0 475 aa7.46□□□□□ -1.22
SMC6-205ENST00000430591 ZNF215Q9UL58 517 aaPredicted RBP7.46□□□□□ -1.22
SMC6-205ENST00000430591 SAMM50Q9Y512 469 aa7.46□□□□□ -1.22
SMC6-205ENST00000430591 CDY2AQ9Y6F7 541 aa7.46□□□□□ -1.22
SMC6-205ENST00000430591 RSPH10B2B2RC85 870 aa7.45□□□□□ -1.22
SMC6-205ENST00000430591 CSDE1O75534 798 aaKnown RBP7.45□□□□□ -1.22
SMC6-205ENST00000430591 C22orf31O95567 290 aa7.45□□□□□ -1.22
SMC6-205ENST00000430591 CXCL10P02778 98 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms