RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 SKOR1P84550 965 aa9.53□□□□□ -0.88
GABPB1-205ENST00000429662 KCNMA1Q12791 1236 aa9.53□□□□□ -0.88
GABPB1-205ENST00000429662 GRIK5Q16478 980 aa9.53□□□□□ -0.88
GABPB1-205ENST00000429662 ASIC2Q16515 512 aa9.53□□□□□ -0.88
GABPB1-205ENST00000429662 EMC10Q5UCC4 262 aa9.53□□□□□ -0.88
GABPB1-205ENST00000429662 ANGEL2Q5VTE6 544 aaKnown RBP9.53□□□□□ -0.88
GABPB1-205ENST00000429662 SULF1Q8IWU6 871 aa9.53□□□□□ -0.88
GABPB1-205ENST00000429662 CD302Q8IX05 232 aa9.53□□□□□ -0.88
GABPB1-205ENST00000429662 ADGRF4Q8IZF3 695 aa9.53□□□□□ -0.88
GABPB1-205ENST00000429662 WHAMMQ8TF30 809 aa9.53□□□□□ -0.88
GABPB1-205ENST00000429662 DCAF4Q8WV16 495 aa9.53□□□□□ -0.88
GABPB1-205ENST00000429662 LMBR1Q8WVP7 490 aa9.53□□□□□ -0.88
GABPB1-205ENST00000429662 PPM1EQ8WY54 764 aa9.53□□□□□ -0.88
GABPB1-205ENST00000429662 TAF4BQ92750 862 aa9.53□□□□□ -0.88
GABPB1-205ENST00000429662 COA7Q96BR5 231 aa9.53□□□□□ -0.88
GABPB1-205ENST00000429662 LRCH3Q96II8 777 aa9.53□□□□□ -0.88
GABPB1-205ENST00000429662 PBKQ96KB5 322 aa9.53□□□□□ -0.88
GABPB1-205ENST00000429662 LSM14BQ9BX40 385 aaKnown RBP9.53□□□□□ -0.88
GABPB1-205ENST00000429662 TLR10Q9BXR5 811 aa9.53□□□□□ -0.88
GABPB1-205ENST00000429662 EHD4Q9H223 541 aa9.53□□□□□ -0.88
GABPB1-205ENST00000429662 PSTPIP2Q9H939 334 aa9.53□□□□□ -0.88
GABPB1-205ENST00000429662 METTL14Q9HCE5 456 aaKnown RBP9.53□□□□□ -0.88
GABPB1-205ENST00000429662 GDF3Q9NR23 364 aa9.53□□□□□ -0.88
GABPB1-205ENST00000429662 FBXL5Q9UKA1 691 aa9.53□□□□□ -0.88
GABPB1-205ENST00000429662 PCDHGC5Q9Y5F6 944 aa9.53□□□□□ -0.88
GABPB1-205ENST00000429662 EPHB6O15197 1021 aa9.52□□□□□ -0.88
GABPB1-205ENST00000429662 EDIL3O43854 480 aa9.52□□□□□ -0.88
GABPB1-205ENST00000429662 FOSP01100 380 aaPredicted RBP9.52□□□□□ -0.88
GABPB1-205ENST00000429662 VIL1P09327 827 aaKnown RBP9.52□□□□□ -0.88
GABPB1-205ENST00000429662 RPL13P26373 211 aaKnown RBP9.52□□□□□ -0.88
GABPB1-205ENST00000429662 CORO7P57737 925 aa9.52□□□□□ -0.88
GABPB1-205ENST00000429662 KLHL30Q0D2K2 578 aa9.52□□□□□ -0.88
GABPB1-205ENST00000429662 TRAF1Q13077 416 aa9.52□□□□□ -0.88
GABPB1-205ENST00000429662 RBM26Q5T8P6 1007 aaKnown RBP9.52□□□□□ -0.88
GABPB1-205ENST00000429662 MEI1Q5TIA1 1274 aa9.52□□□□□ -0.88
GABPB1-205ENST00000429662 PRAMEF18Q5VWM3 479 aa9.52□□□□□ -0.88
GABPB1-205ENST00000429662 NFRKBQ6P4R8 1299 aa9.52□□□□□ -0.88
GABPB1-205ENST00000429662 VPS36Q86VN1 386 aa9.52□□□□□ -0.88
GABPB1-205ENST00000429662 EFCAB13Q8IY85 973 aa9.52□□□□□ -0.88
GABPB1-205ENST00000429662 HAS1Q92839 578 aa9.52□□□□□ -0.88
GABPB1-205ENST00000429662 CAPS2Q9BXY5 557 aa9.52□□□□□ -0.88
GABPB1-205ENST00000429662 EFCC1Q9HA90 598 aa9.52□□□□□ -0.88
GABPB1-205ENST00000429662 POLLQ9UGP5 575 aa9.52□□□□□ -0.88
GABPB1-205ENST00000429662 SERPINB13Q9UIV8 391 aa9.52□□□□□ -0.88
GABPB1-205ENST00000429662 INTUQ9ULD6 942 aa9.52□□□□□ -0.88
GABPB1-205ENST00000429662 TFR2Q9UP52 801 aa9.52□□□□□ -0.88
GABPB1-205ENST00000429662 TRAF3IP3Q9Y228 551 aa9.52□□□□□ -0.88
GABPB1-205ENST00000429662 DAGLAQ9Y4D2 1042 aa9.52□□□□□ -0.88
GABPB1-205ENST00000429662 PCDHA2Q9Y5H9 948 aa9.52□□□□□ -0.88
GABPB1-205ENST00000429662 FRMPD2Q68DX3 1309 aaPredicted RBP9.52□□□□□ -0.89
GABPB1-205ENST00000429662 GTPBP10A4D1E9 387 aaKnown RBP9.51□□□□□ -0.89
GABPB1-205ENST00000429662 PDXKO00764 312 aa9.51□□□□□ -0.89
GABPB1-205ENST00000429662 SLC16A3O15427 465 aaKnown RBP9.51□□□□□ -0.89
GABPB1-205ENST00000429662 NOL4O94818 638 aa9.51□□□□□ -0.89
GABPB1-205ENST00000429662 AKR1B1P15121 316 aa9.51□□□□□ -0.89
GABPB1-205ENST00000429662 SLC1A4P43007 532 aa9.51□□□□□ -0.89
GABPB1-205ENST00000429662 GFPT1Q06210 699 aaPredicted RBP9.51□□□□□ -0.89
GABPB1-205ENST00000429662 ADAM9Q13443 819 aa9.51□□□□□ -0.89
GABPB1-205ENST00000429662 CLUL1Q15846 466 aa9.51□□□□□ -0.89
GABPB1-205ENST00000429662 CDC37Q16543 378 aaPredicted RBP9.51□□□□□ -0.89
GABPB1-205ENST00000429662 HERC4Q5GLZ8 1057 aaPredicted RBP9.51□□□□□ -0.89
GABPB1-205ENST00000429662 LDLRAD1Q5T700 205 aa9.51□□□□□ -0.89
GABPB1-205ENST00000429662 HHIPL2Q6UWX4 724 aa9.51□□□□□ -0.89
GABPB1-205ENST00000429662 B4GALNT4Q76KP1 1039 aa9.51□□□□□ -0.89
GABPB1-205ENST00000429662 GPBP1Q86WP2 473 aa9.51□□□□□ -0.89
GABPB1-205ENST00000429662 TBC1D16Q8TBP0 767 aa9.51□□□□□ -0.89
GABPB1-205ENST00000429662 SMCR8Q8TEV9 937 aaPredicted RBP9.51□□□□□ -0.89
GABPB1-205ENST00000429662 HPS3Q969F9 1004 aa9.51□□□□□ -0.89
GABPB1-205ENST00000429662 MKL1Q969V6 931 aa9.51□□□□□ -0.89
GABPB1-205ENST00000429662 CALR3Q96L12 384 aaKnown RBP9.51□□□□□ -0.89
GABPB1-205ENST00000429662 FAM20AQ96MK3 541 aa9.51□□□□□ -0.89
GABPB1-205ENST00000429662 MRIQ9BWK5 157 aa9.51□□□□□ -0.89
GABPB1-205ENST00000429662 KCTD10Q9H3F6 313 aa9.51□□□□□ -0.89
GABPB1-205ENST00000429662 CPVLQ9H3G5 476 aa9.51□□□□□ -0.89
GABPB1-205ENST00000429662 KCNMB3Q9NPA1 279 aa9.51□□□□□ -0.89
GABPB1-205ENST00000429662 GPCPD1Q9NPB8 672 aa9.51□□□□□ -0.89
GABPB1-205ENST00000429662 EMILIN3Q9NT22 766 aa9.51□□□□□ -0.89
GABPB1-205ENST00000429662 TMEM51Q9NW97 253 aa9.51□□□□□ -0.89
GABPB1-205ENST00000429662 RSPH14Q9UHP6 348 aa9.51□□□□□ -0.89
GABPB1-205ENST00000429662 DMGDHQ9UI17 866 aaKnown RBP9.51□□□□□ -0.89
GABPB1-205ENST00000429662 MYH1P12882 1939 aa9.51□□□□□ -0.89
GABPB1-205ENST00000429662 ATXN2Q99700 1313 aaKnown RBP9.51□□□□□ -0.89
GABPB1-205ENST00000429662 A0A087WUV0 522 aaPredicted RBP9.5□□□□□ -0.89
GABPB1-205ENST00000429662 A0A0A6YYK5 440 aaPredicted RBP9.5□□□□□ -0.89
GABPB1-205ENST00000429662 CCDC188H7C350 402 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 TULP1O00294 542 aaPredicted RBP9.5□□□□□ -0.89
GABPB1-205ENST00000429662 EBAG9O00559 213 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 EIF3HO15372 352 aaKnown RBP eCLIP9.5□□□□□ -0.89
GABPB1-205ENST00000429662 ZEB2O60315 1214 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 ECE2O60344 883 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 PALMO75781 387 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 ZMYND10O75800 440 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 FLOT1O75955 427 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 AFPP02771 609 aaKnown RBP9.5□□□□□ -0.89
GABPB1-205ENST00000429662 KRT18P05783 430 aaKnown RBP9.5□□□□□ -0.89
GABPB1-205ENST00000429662 MYBL2P10244 700 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 CYP11B2P19099 503 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 PRKCIP41743 596 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 IRAK1P51617 712 aa9.5□□□□□ -0.89
GABPB1-205ENST00000429662 NPEPPSP55786 919 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms