RNA–Protein interactions for RNA: ENST00000428494.6

GHDC-203, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 2,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-203ENST00000428494 FAM86B2P0C5J1 330 aa17.13■□□□□ 0.33
GHDC-203ENST00000428494 ARHGAP4P98171 946 aa17.13■□□□□ 0.33
GHDC-203ENST00000428494 ACTN3Q08043 901 aaPredicted RBP17.13■□□□□ 0.33
GHDC-203ENST00000428494 RASGEF1CQ8N431 466 aa17.13■□□□□ 0.33
GHDC-203ENST00000428494 CERS5Q8N5B7 392 aa17.13■□□□□ 0.33
GHDC-203ENST00000428494 ARFGAP2Q8N6H7 521 aa17.13■□□□□ 0.33
GHDC-203ENST00000428494 SYT2Q8N9I0 419 aaPredicted RBP17.13■□□□□ 0.33
GHDC-203ENST00000428494 SLC35G2Q8TBE7 412 aa17.13■□□□□ 0.33
GHDC-203ENST00000428494 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.13■□□□□ 0.33
GHDC-203ENST00000428494 RAPGEF5Q92565 580 aa17.13■□□□□ 0.33
GHDC-203ENST00000428494 RGL1Q9NZL6 768 aa17.13■□□□□ 0.33
GHDC-203ENST00000428494 SUCLA2Q9P2R7 463 aaPredicted RBP17.13■□□□□ 0.33
GHDC-203ENST00000428494 SWAP70Q9UH65 585 aa17.13■□□□□ 0.33
GHDC-203ENST00000428494 ATP8A1Q9Y2Q0 1164 aa17.13■□□□□ 0.33
GHDC-203ENST00000428494 IGSF9BQ9UPX0 1349 aa17.13■□□□□ 0.33
GHDC-203ENST00000428494 SRCAPQ6ZRS2 3230 aa17.13■□□□□ 0.33
GHDC-203ENST00000428494 PHF20L1A8MW92 1017 aa17.12■□□□□ 0.33
GHDC-203ENST00000428494 PPP2R2AP63151 447 aa17.12■□□□□ 0.33
GHDC-203ENST00000428494 KRT71Q3SY84 523 aa17.12■□□□□ 0.33
GHDC-203ENST00000428494 USH1GQ495M9 461 aa17.12■□□□□ 0.33
GHDC-203ENST00000428494 DCAF12L1Q5VU92 463 aa17.12■□□□□ 0.33
GHDC-203ENST00000428494 GPATCH11Q8N954 259 aa17.12■□□□□ 0.33
GHDC-203ENST00000428494 EIF1ADQ8N9N8 165 aaKnown RBP17.12■□□□□ 0.33
GHDC-203ENST00000428494 HES6Q96HZ4 224 aa17.12■□□□□ 0.33
GHDC-203ENST00000428494 NCAPGQ9BPX3 1015 aa17.12■□□□□ 0.33
GHDC-203ENST00000428494 OSBPL7Q9BZF2 842 aa17.12■□□□□ 0.33
GHDC-203ENST00000428494 KCNG1Q9UIX4 513 aa17.12■□□□□ 0.33
GHDC-203ENST00000428494 DNM1LO00429 736 aa17.12■□□□□ 0.33
GHDC-203ENST00000428494 ZBTB39O15060 712 aa17.12■□□□□ 0.33
GHDC-203ENST00000428494 CALUO43852 315 aaPredicted RBP17.12■□□□□ 0.33
GHDC-203ENST00000428494 ATP2C2O75185 946 aa17.12■□□□□ 0.33
GHDC-203ENST00000428494 NFIAQ12857 509 aa17.12■□□□□ 0.33
GHDC-203ENST00000428494 ZNF211Q13398 564 aaPredicted RBP17.12■□□□□ 0.33
GHDC-203ENST00000428494 COG2Q14746 738 aa17.12■□□□□ 0.33
GHDC-203ENST00000428494 ZC2HC1CQ53FD0 456 aaPredicted RBP17.12■□□□□ 0.33
GHDC-203ENST00000428494 FAM196AQ6ZSG2 479 aa17.12■□□□□ 0.33
GHDC-203ENST00000428494 OLIG1Q8TAK6 271 aa17.12■□□□□ 0.33
GHDC-203ENST00000428494 PIGOQ8TEQ8 1089 aa17.12■□□□□ 0.33
GHDC-203ENST00000428494 GLG1Q92896 1179 aa17.12■□□□□ 0.33
GHDC-203ENST00000428494 JPH2Q9BR39 696 aaPredicted RBP17.12■□□□□ 0.33
GHDC-203ENST00000428494 VCPKMTQ9H867 229 aa17.12■□□□□ 0.33
GHDC-203ENST00000428494 CYP3A7-CYP3A51PA0A087WV96 503 aa17.11■□□□□ 0.33
GHDC-203ENST00000428494 CCDC188H7C350 402 aa17.11■□□□□ 0.33
GHDC-203ENST00000428494 CYP3A7P24462 503 aa17.11■□□□□ 0.33
GHDC-203ENST00000428494 RPA1P27694 616 aa17.11■□□□□ 0.33
GHDC-203ENST00000428494 RUFY4Q6ZNE9 571 aa17.11■□□□□ 0.33
GHDC-203ENST00000428494 SLFN12Q8IYM2 578 aa17.11■□□□□ 0.33
GHDC-203ENST00000428494 TBC1D22AQ8WUA7 517 aa17.11■□□□□ 0.33
GHDC-203ENST00000428494 LMBR1Q8WVP7 490 aa17.11■□□□□ 0.33
GHDC-203ENST00000428494 LENG9Q96B70 501 aa17.11■□□□□ 0.33
GHDC-203ENST00000428494 ERVK-5Q9HDB9 667 aa17.11■□□□□ 0.33
GHDC-203ENST00000428494 BCS1LQ9Y276 419 aa17.11■□□□□ 0.33
GHDC-203ENST00000428494 F8VZ95 297 aa17.11■□□□□ 0.33
GHDC-203ENST00000428494 TGFB1I1O43294 461 aa17.11■□□□□ 0.33
GHDC-203ENST00000428494 NMT1P30419 496 aaKnown RBP17.11■□□□□ 0.33
GHDC-203ENST00000428494 CACNB3P54284 484 aa17.11■□□□□ 0.33
GHDC-203ENST00000428494 POU5F1Q01860 360 aaKnown RBP17.11■□□□□ 0.33
GHDC-203ENST00000428494 BIRC3Q13489 604 aa17.11■□□□□ 0.33
GHDC-203ENST00000428494 AADACL2Q6P093 401 aa17.11■□□□□ 0.33
GHDC-203ENST00000428494 VPS36Q86VN1 386 aa17.11■□□□□ 0.33
GHDC-203ENST00000428494 CCDC26Q8TAB7 109 aa17.11■□□□□ 0.33
GHDC-203ENST00000428494 TYW1Q9NV66 732 aaKnown RBP17.11■□□□□ 0.33
GHDC-203ENST00000428494 TAS2R14Q9NYV8 317 aa17.11■□□□□ 0.33
GHDC-203ENST00000428494 AMFRQ9UKV5 643 aa17.11■□□□□ 0.33
GHDC-203ENST00000428494 UTP11Q9Y3A2 253 aaKnown RBP17.11■□□□□ 0.33
GHDC-203ENST00000428494 SHBGP04278 402 aa17.1■□□□□ 0.33
GHDC-203ENST00000428494 BYSLQ13895 437 aaKnown RBP17.1■□□□□ 0.33
GHDC-203ENST00000428494 CCDC121Q6ZUS5 278 aa17.1■□□□□ 0.33
GHDC-203ENST00000428494 PALB2Q86YC2 1186 aa17.1■□□□□ 0.33
GHDC-203ENST00000428494 ATP8B4Q8TF62 1192 aa17.1■□□□□ 0.33
GHDC-203ENST00000428494 ARHGEF26Q96DR7 871 aa17.1■□□□□ 0.33
GHDC-203ENST00000428494 SEC16BQ96JE7 1060 aa17.1■□□□□ 0.33
GHDC-203ENST00000428494 EML1O00423 815 aa17.1■□□□□ 0.33
GHDC-203ENST00000428494 CAND2O75155 1236 aa17.1■□□□□ 0.33
GHDC-203ENST00000428494 EEF2P13639 858 aaKnown RBP17.1■□□□□ 0.33
GHDC-203ENST00000428494 HOXA13P31271 388 aaPredicted RBP17.1■□□□□ 0.33
GHDC-203ENST00000428494 SLC30A5Q8TAD4 765 aa17.1■□□□□ 0.33
GHDC-203ENST00000428494 CRYGNQ8WXF5 182 aa17.1■□□□□ 0.33
GHDC-203ENST00000428494 MBOAT7Q96N66 472 aa17.1■□□□□ 0.33
GHDC-203ENST00000428494 SLITRK6Q9H5Y7 841 aa17.1■□□□□ 0.33
GHDC-203ENST00000428494 KLC4Q9NSK0 619 aa17.1■□□□□ 0.33
GHDC-203ENST00000428494 STAT1P42224 750 aa17.09■□□□□ 0.33
GHDC-203ENST00000428494 IFFO1Q0D2I5 559 aa17.09■□□□□ 0.33
GHDC-203ENST00000428494 UBAP2Q5T6F2 1119 aaKnown RBP17.09■□□□□ 0.33
GHDC-203ENST00000428494 CCDC114Q96M63 670 aa17.09■□□□□ 0.33
GHDC-203ENST00000428494 DNAJC18Q9H819 358 aa17.09■□□□□ 0.33
GHDC-203ENST00000428494 SLC40A1Q9NP59 571 aa17.09■□□□□ 0.33
GHDC-203ENST00000428494 SEPT11Q9NVA2 429 aaKnown RBP17.09■□□□□ 0.33
GHDC-203ENST00000428494 GOLGA6L7A0A1B0GV03 622 aa17.09■□□□□ 0.33
GHDC-203ENST00000428494 MSH4O15457 936 aa17.09■□□□□ 0.33
GHDC-203ENST00000428494 DDX3YO15523 660 aaKnown RBP17.09■□□□□ 0.33
GHDC-203ENST00000428494 IBSPP21815 317 aaPredicted RBP17.09■□□□□ 0.33
GHDC-203ENST00000428494 USP8P40818 1118 aa17.09■□□□□ 0.33
GHDC-203ENST00000428494 TCP10Q12799 353 aa17.09■□□□□ 0.33
GHDC-203ENST00000428494 MTMR3Q13615 1198 aa17.09■□□□□ 0.33
GHDC-203ENST00000428494 DRAP1Q14919 205 aaPredicted RBP17.09■□□□□ 0.33
GHDC-203ENST00000428494 CDC42EP5Q6NZY7 148 aa17.09■□□□□ 0.33
GHDC-203ENST00000428494 SYCE1Q8N0S2 351 aa17.09■□□□□ 0.33
GHDC-203ENST00000428494 SEC14L1Q92503 715 aa17.09■□□□□ 0.33
GHDC-203ENST00000428494 BORCS6Q96GS4 357 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms