RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 NOVA2Q9UNW9 492 aaKnown RBP5.58□□□□□ -1.52
RIF1-203ENST00000428287 MEGF6O75095 1541 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 PCDH11XQ9BZA7 1347 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 COL5A3P25940 1745 aaPredicted RBP5.58□□□□□ -1.52
RIF1-203ENST00000428287 SIPA1L1O43166 1804 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 MOCS3O95396 460 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 CTCFP49711 727 aaPredicted RBP5.58□□□□□ -1.52
RIF1-203ENST00000428287 TYW1BQ6NUM6 668 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 TRIM74Q86UV6 250 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 TRIM73Q86UV7 250 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 TPCN2Q8NHX9 752 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 ZNF398Q8TD17 642 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 ASAP3Q8TDY4 903 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 IFT81Q8WYA0 676 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 MYL10Q9BUA6 226 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 FAM114A2Q9NRY5 505 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 NR2E1Q9Y466 385 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 CSB-PGBD3P0DP91 1061 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 HSPA6P17066 643 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 KLK7P49862 253 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 PPATQ06203 517 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 RASA2Q15283 850 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 RPS6KA1Q15418 735 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 EXOC3L1Q86VI1 746 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 ZBTB38Q8NAP3 1195 aaPredicted RBP5.58□□□□□ -1.52
RIF1-203ENST00000428287 ESR2Q92731 530 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 PUS3Q9BZE2 481 aaKnown RBP5.58□□□□□ -1.52
RIF1-203ENST00000428287 SEMA6BQ9H3T3 888 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 GMEB1Q9Y692 573 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 CEP290O15078 2479 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 STAT6P42226 847 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 LAMB3Q13751 1172 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 DHX34Q14147 1143 aaKnown RBP5.58□□□□□ -1.52
RIF1-203ENST00000428287 PFKFB3Q16875 520 aaPredicted RBP5.58□□□□□ -1.52
RIF1-203ENST00000428287 MSL1Q68DK7 614 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 IRGCQ6NXR0 463 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 DDX42Q86XP3 938 aaKnown RBP eCLIP5.58□□□□□ -1.52
RIF1-203ENST00000428287 RELL1Q8IUW5 271 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 TEKT4Q8WW24 435 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 DNAJB4Q9UDY4 337 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 EML5Q05BV3 1969 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 STRNO43815 780 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 CALM1P0DP23 149 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 CALM2P0DP24 149 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 CALM3P0DP25 149 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 PSMD2Q13200 908 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 MYBPC3Q14896 1274 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 KPNB1Q14974 876 aaKnown RBP5.58□□□□□ -1.52
RIF1-203ENST00000428287 CTC1Q2NKJ3 1217 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 FKBP15Q5T1M5 1219 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 CHADLQ6NUI6 762 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 RAB11FIP4Q86YS3 637 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 ANKRD13CQ8N6S4 541 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 NEK9Q8TD19 979 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 PPP1R14BQ96C90 147 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 NOC4LQ9BVI4 516 aaKnown RBP5.58□□□□□ -1.52
RIF1-203ENST00000428287 GRHL1Q9NZI5 618 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 CEP72Q9P209 647 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 ABCA3Q99758 1704 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 TNKSO95271 1327 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 RTL9Q8NET4 1388 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 FAM187AA6NFU0 413 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 LRRC53A6NM62 1247 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 PODXLO00592 558 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 T-ENOLP0DO92 83 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 GNAT1P11488 350 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 EDRF1Q3B7T1 1238 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 PPP1R15BQ5SWA1 713 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 TBC1D9BQ66K14 1250 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 RPUSD2Q8IZ73 545 aaKnown RBP5.58□□□□□ -1.52
RIF1-203ENST00000428287 SYT11Q9BT88 431 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 AAASQ9NRG9 546 aa5.58□□□□□ -1.52
RIF1-203ENST00000428287 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.58□□□□□ -1.52
RIF1-203ENST00000428287 CYP27B1O15528 508 aa5.57□□□□□ -1.52
RIF1-203ENST00000428287 HNRNPCL1O60812 293 aaKnown RBP5.57□□□□□ -1.52
RIF1-203ENST00000428287 MYL6BP14649 208 aa5.57□□□□□ -1.52
RIF1-203ENST00000428287 RASSF7Q02833 373 aa5.57□□□□□ -1.52
RIF1-203ENST00000428287 ADAM9Q13443 819 aa5.57□□□□□ -1.52
RIF1-203ENST00000428287 PI16Q6UXB8 463 aa5.57□□□□□ -1.52
RIF1-203ENST00000428287 ARHGAP22Q7Z5H3 698 aa5.57□□□□□ -1.52
RIF1-203ENST00000428287 ANKRD23Q86SG2 305 aa5.57□□□□□ -1.52
RIF1-203ENST00000428287 DAGLBQ8NCG7 672 aa5.57□□□□□ -1.52
RIF1-203ENST00000428287 MDM1Q8TC05 714 aa5.57□□□□□ -1.52
RIF1-203ENST00000428287 RNF25Q96BH1 459 aaPredicted RBP5.57□□□□□ -1.52
RIF1-203ENST00000428287 ZMYND12Q9H0C1 365 aa5.57□□□□□ -1.52
RIF1-203ENST00000428287 SH3GLB2Q9NR46 395 aa5.57□□□□□ -1.52
RIF1-203ENST00000428287 STK17AQ9UEE5 414 aa5.57□□□□□ -1.52
RIF1-203ENST00000428287 PNMA2Q9UL42 364 aa5.57□□□□□ -1.52
RIF1-203ENST00000428287 NR2E3Q9Y5X4 410 aa5.57□□□□□ -1.52
RIF1-203ENST00000428287 RPTORQ8N122 1335 aa5.57□□□□□ -1.52
RIF1-203ENST00000428287 AP1G2O75843 785 aa5.57□□□□□ -1.52
RIF1-203ENST00000428287 SSBP05455 408 aaKnown RBP eCLIP5.57□□□□□ -1.52
RIF1-203ENST00000428287 MUTP22033 750 aa5.57□□□□□ -1.52
RIF1-203ENST00000428287 MATR3P43243 847 aaKnown RBP eCLIP5.57□□□□□ -1.52
RIF1-203ENST00000428287 SH3BGRP55822 239 aaPredicted RBP5.57□□□□□ -1.52
RIF1-203ENST00000428287 MGAT5Q09328 741 aa5.57□□□□□ -1.52
RIF1-203ENST00000428287 MPP2Q14168 576 aa5.57□□□□□ -1.52
RIF1-203ENST00000428287 DTNBP1Q96EV8 351 aa5.57□□□□□ -1.52
RIF1-203ENST00000428287 TBC1D10AQ9BXI6 508 aa5.57□□□□□ -1.52
RIF1-203ENST00000428287 URB1O60287 2271 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms